Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,290,794 |
A→C |
I661L (ATC→CTC) |
yraJ → |
putative outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,290,794 | 0 | A | C | 98.5%
| 734.2
/ ‑2.0
| 208 | I661L (ATC→CTC) | yraJ | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base C (100/102); total (101/107) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 222 total aligned reads displayed.
CGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATC > NC_000913/3290697‑3290890
|
cGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTAGTtctc < 1:4640823/100‑1 (MQ=255)
gcAGTGACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGCTACCGGCGGCGTGGTTctcca < 1:4759679/99‑1 (MQ=255)
ccAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcca < 1:3300501/100‑1 (MQ=255)
aGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctccatc > 2:4367664/1‑100 (MQ=255)
aGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctccatc < 1:173246/100‑1 (MQ=255)
aGTTACCGTTAACCTTATGGCACCTTCAGTGCCGCATACAGCTACGGTAATGAAAGCAGCCAATACAATTACGGCGTTACCGGCGGGGTGGTtctcgcta > 2:5071113/1‑96 (MQ=255)
gTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctccatcc < 2:2190112/100‑1 (MQ=255)
aCCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCa < 2:545609/100‑1 (MQ=255)
ccGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCAt > 2:1166673/1‑100 (MQ=255)
cGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATGACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATg > 1:408542/1‑100 (MQ=255)
gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgn < 2:204808/100‑2 (MQ=255)
gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg < 2:4002788/100‑1 (MQ=255)
gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg > 1:532105/1‑100 (MQ=255)
gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg > 2:4205999/1‑100 (MQ=255)
gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg < 2:4751435/100‑1 (MQ=255)
gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg > 1:3609032/1‑100 (MQ=255)
tCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCg < 2:2947199/100‑1 (MQ=255)
tCACCTTATGGCACCATCAGTGCCGTATACAGCTACGTTAATGACAGCAGCCAATACAAGTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCg < 2:1613172/100‑1 (MQ=255)
aCCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTg > 1:4863530/1‑100 (MQ=255)
aCCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTg < 1:1182539/100‑1 (MQ=255)
ccTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGa > 1:2120161/1‑100 (MQ=255)
ccTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGa < 1:2843911/100‑1 (MQ=255)
cTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGan < 1:2393716/100‑2 (MQ=255)
cTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGAc < 2:5222993/100‑1 (MQ=255)
cTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGAc > 1:4285724/1‑100 (MQ=255)
ttATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACg > 1:2978696/1‑100 (MQ=255)
ctATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACg < 2:4393546/99‑1 (MQ=255)
ntGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACgag > 1:4435463/2‑98 (MQ=255)
tGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGctc < 1:1530487/100‑1 (MQ=255)
ggCAGCTTCCGTGCTCGATAGAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCAGCCTCATGGCGTGACGctct < 2:146858/100‑1 (MQ=255)
ggCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGctct > 1:922371/1‑100 (MQ=255)
ggCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGctct > 2:2221775/1‑100 (MQ=255)
gCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCtctc < 2:1749233/100‑1 (MQ=255)
cACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCg < 1:3584083/100‑1 (MQ=255)
cACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCg > 2:1082732/1‑100 (MQ=255)
cACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCg < 1:5046478/100‑1 (MQ=255)
cACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCg > 1:3859786/1‑100 (MQ=255)
ccTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCa < 1:3805865/100‑1 (MQ=255)
ttCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAat < 1:4121608/100‑1 (MQ=255)
tCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGCGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAata < 2:2418881/100‑1 (MQ=255)
tGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTg < 1:4686397/100‑1 (MQ=255)
gCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTgg > 1:2416969/1‑100 (MQ=255)
ccGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTggg > 2:4928282/1‑100 (MQ=255)
ccGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTggg < 1:2901667/100‑1 (MQ=255)
ccGGATACAGCGACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTggg < 2:3641259/100‑1 (MQ=255)
ggATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCa > 2:1853212/1‑100 (MQ=255)
ggATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCa < 2:1257098/100‑1 (MQ=255)
gcatccAGCTACGGTAATGACAGCAGCCCATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCa < 2:4664212/95‑1 (MQ=255)
gATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCaa > 1:786792/1‑100 (MQ=255)
gATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCaa > 2:4692367/1‑100 (MQ=255)
aTACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAAc < 1:5243148/100‑1 (MQ=255)
aTACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAAc > 2:5373098/1‑100 (MQ=255)
gCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCttt > 1:4605526/1‑100 (MQ=255)
gCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCttt < 2:645356/100‑1 (MQ=255)
gCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCttt < 2:1850513/100‑1 (MQ=255)
tACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTg < 1:2064493/100‑1 (MQ=255)
aCGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTgc > 1:1804979/1‑100 (MQ=255)
gTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCt < 2:776653/100‑1 (MQ=255)
gTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCt < 1:627696/100‑1 (MQ=255)
tAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCtt < 2:4794908/100‑1 (MQ=255)
aTGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTAt > 2:2093682/1‑100 (MQ=255)
tGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATc > 1:3529108/1‑100 (MQ=255)
tGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATc > 1:415948/1‑100 (MQ=255)
gACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCg < 2:2714054/100‑1 (MQ=255)
aCAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGa < 2:4299952/100‑1 (MQ=255)
agcagcCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATg < 2:2912441/100‑1 (MQ=255)
agcagcCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATg > 2:2830664/1‑100 (MQ=255)
gcCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTaa > 1:1860827/1‑100 (MQ=255)
atctcAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACgg < 1:69497/96‑1 (MQ=255)
aaTACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACgg < 2:1732029/100‑1 (MQ=255)
aaTACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACgg < 1:4722508/100‑1 (MQ=255)
aaTACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACgg < 2:1840047/100‑1 (MQ=255)
aTACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGa > 1:5159653/1‑100 (MQ=255)
tACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAg < 2:3175146/100‑1 (MQ=255)
cAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCa > 2:4039585/1‑100 (MQ=255)
cAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCa > 2:2995040/1‑100 (MQ=255)
aaTTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCAGGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCan < 1:1597471/100‑2 (MQ=255)
aTTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATc > 2:2555838/1‑100 (MQ=255)
aTTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATc < 1:214181/100‑1 (MQ=255)
ttACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCt > 1:5138039/1‑100 (MQ=255)
aCGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTgg > 1:3962082/1‑100 (MQ=255)
cGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGc > 1:2405072/1‑100 (MQ=255)
ggCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCg < 2:2638027/100‑1 (MQ=255)
cGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTg > 2:73827/1‑100 (MQ=255)
ttACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAg > 2:1140659/1‑100 (MQ=255)
aCCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGa < 2:3553068/100‑1 (MQ=255)
ccGGCGGCGTGGTTCTCCATCCTCATGGCGTGATGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGAt > 2:3971466/1‑100 (MQ=255)
ccGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGAt < 1:2669136/100‑1 (MQ=255)
cggcggCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa > 1:5442966/1‑100 (MQ=255)
cggcggCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa < 2:698312/100‑1 (MQ=255)
cggcggCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa > 1:2880448/1‑100 (MQ=255)
cggcggCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa < 2:3833041/100‑1 (MQ=255)
gcggcgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACa < 1:139253/100‑1 (MQ=255)
ggcgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACaaa > 1:1010970/1‑100 (MQ=255)
cgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAAc < 2:1687276/100‑1 (MQ=255)
cgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAAc < 2:2454290/100‑1 (MQ=255)
cgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAAc < 2:349963/100‑1 (MQ=255)
tGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTa > 2:5141802/1‑100 (MQ=255)
tGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTa > 1:3706622/1‑100 (MQ=255)
gTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTAta > 2:4502575/1‑99 (MQ=255)
|
CGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATC > NC_000913/3290697‑3290890
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
