Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F422 I51 R1 223 69.9 1534784 95.1% 1459579 214.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,290,794 A→C I661L (ATC→CTC)  yraJ → putative outer membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,290,7940AC98.9% 286.9 / NA 89I661L (ATC→CTC) yraJputative outer membrane protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base C (42/46);  minor base T (1/0);  total (43/46)
Fisher's exact test for biased strand distribution p-value = 4.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAAACAACACAGTTTGTG  >  NC_000913/3290563‑3291021
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                    
cAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcca                                                                                                                                                                                                                                  <  1:87419/236‑1 (MQ=255)
  gATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcca‑tc                                                                                                                                                                                                                               >  1:453481/1‑236 (MQ=255)
      aCCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGCGGGTCTCCA‑TCCGCa                                                                                                                                                                                                                           >  2:546378/1‑236 (MQ=255)
                     cGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCtctc                                                                                                                                                                                                            >  2:530585/1‑236 (MQ=255)
                     cGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGGGGTTCTCCACTCCCAATGCCG‑GACGCtctc                                                                                                                                                                                                            >  2:285854/1‑236 (MQ=255)
                      gCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCg                                                                                                                                                                                                           <  2:552223/236‑1 (MQ=255)
                       cccaacccaaCTTGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGct                                                                                                                                                                                                               <  1:705821/231‑1 (MQ=255)
                       cccaacccaaCATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGct                                                                                                                                                                                                               <  1:170816/231‑1 (MQ=255)
                       cccaacccaaCATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGct                                                                                                                                                                                                               <  1:285854/231‑1 (MQ=255)
                       cccaacccaaCATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGc                                                                                                                                                                                                          <  1:546378/236‑1 (MQ=255)
                       cccaacccaaCATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGc                                                                                                                                                                                                          <  1:66251/236‑1 (MQ=255)
                       cccaacccaaCATGAAATGCGTCTTGATGGCTCACTGCTGCATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAAGGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGc                                                                                                                                                                                                          <  1:530585/236‑1 (MQ=255)
                         caacccaacATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTTCA‑TCCTCATGGCGGGAAGCTCTCGcca                                                                                                                                                                                                        >  2:311855/1‑234 (MQ=255)
                          aacccaacATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTNCCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATTGCGTGACGCTCTCGCa                                                                                                                                                                                                         >  1:174885/1‑234 (MQ=255)
                            cacagcgtGAAATCCGTCTTAATGGCTCATTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAatat                                                                                                                                                                                                     <  2:401911/229‑1 (MQ=255)
                             ccaacATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATc                                                                                                                                                                                                    >  1:688750/1‑236 (MQ=255)
                                       aTGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGc                                                                                                                                                                                          >  2:159957/1‑236 (MQ=255)
                                       aTGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCCCTCGCCATATCTGGGCAACGc                                                                                                                                                                                          >  1:79373/1‑236 (MQ=255)
                                       aTGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGGTCTCCA‑TCTTCATGGCGTGACGCTCTCGCAATATCTTGGCa                                                                                                                                                                                              >  1:654203/1‑232 (MQ=255)
                                        gtcGTGTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCaa                                                                                                                                                                                             <  2:79373/230‑1 (MQ=255)
                                            tCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCaa                                                                                                                                                                                             >  2:454072/1‑228 (MQ=255)
                                                             tgGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAAc                                                                                                                                                                    <  2:276021/236‑1 (MQ=255)
                                                                    tgGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCCTTTTCGCTTTACGATGCTAACggcg                                                                                                                                                                >  2:384971/1‑231 (MQ=255)
                                                                    tgGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGAAGCTCTCGCAATATATGGGCAACGCTTTTGTGCTTATCGATGCTAACGGAGCAt                                                                                                                                                             >  2:199584/1‑236 (MQ=255)
                                                                    tgGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGGGGTTCTCCA‑TACTCATGGCCTGACGCTCTCGCAATATCTTGGCCACGCTTTTTCGCTTATTGATGCTAACCGAGCAt                                                                                                                                                             >  2:435228/1‑236 (MQ=255)
                                                                         gCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGc                                                                                                                                                        >  2:301640/1‑236 (MQ=255)
                                                                             gAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGa                                                                                                                                                    <  1:187444/236‑1 (MQ=255)
                                                                              aGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTTTCCA‑TCCTCATGGCGTGAAGCTCTCGCAATATCTGGGCAAAGCTTTTTCGCTTATCGATGCTAACGGAGCATcctgcggtag                                                                                                                                                   >  2:136933/1‑227 (MQ=255)
                                                                              aGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGc                                                                                                                                                                                                                <  1:292237/175‑1 (MQ=255)
                                                                              aGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGc                                                                                                                                                                                                                >  2:292237/1‑175 (MQ=255)
                                                                                        tGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCCATATCTGGGCGAAGCCTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAgggttc                                                                                                                                              >  2:573568/1‑227 (MQ=255)
                                                                                         ggAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCTTGAGGATACAAAAc                                                                                                                                         >  2:405047/1‑235 (MQ=255)
                                                                                          gAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TTCTCATGGCTTTACGCTCTCGCAAAAACTTGGCCACGCGTTTTAGCTTATCCATGCTAACGTAACATCTGGCGTGCGGATTCACAACTa                                                                                                                                       >  2:701912/1‑236 (MQ=255)
                                                                                          gAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCaa                                                                                                                                                                                             <  2:255006/182‑1 (MQ=255)
                                                                                          gAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCaa                                                                                                                                                                                             >  1:255006/1‑182 (MQ=255)
                                                                                               aaGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCg                                                                                                                                   <  2:688750/235‑1 (MQ=255)
                                                                                               aaGTCTGGATGACCATATCAACCAT‑ACAGTGAGCCGGAACGCCAGTTCCCGTTCACCGTATGGCCCCTTCAGGGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCg                                                                                                                                   <  2:766824/235‑1 (MQ=255)
                                                                                                    tGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATc                                                                                                                                                                             >  1:108225/1‑188 (MQ=255)
                                                                                                    tGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATc                                                                                                                                                                             <  2:108225/188‑1 (MQ=255)
                                                                                                      gATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTg                                                                                                                            <  1:573568/235‑1 (MQ=255)
                                                                                                           cGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcca                                                                                                                                                                                                                                  >  2:238797/1‑129 (MQ=255)
                                                                                                           cGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcca                                                                                                                                                                                                                                  <  1:238797/129‑1 (MQ=255)
                                                                                                           cGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCg                                                                                                                      <  1:454072/236‑1 (MQ=255)
                                                                                                            gATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCg                                                                                                                                   >  1:653529/1‑222 (MQ=255)
                                                                                                            gATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCg                                                                                                                                   <  2:653529/222‑1 (MQ=255)
                                                                                                                 caacCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCt                                                                                                                 <  1:742644/235‑1 (MQ=255)
                                                                                                                     cATAACCGT‑AGCCTAAACGCCAGTTAACTGTCACCTTAGTGCCCCTTCAGTGCCGGATACAGCTCCGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTgg                                                                                                            <  2:446115/236‑1 (MQ=255)
                                                                                                                         aacatgaGCCTGAACCCCAGTTCCCGTTCCCCTTATGGCACCTTCAGGGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGNCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTgg                                                                                                            <  2:174885/227‑1 (MQ=255)
                                                                                                                         aCAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTAt                                                                                                        >  1:218928/1‑236 (MQ=255)
                                                                                                                           aGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATc                                                                                                                                     <  2:582565/205‑1 (MQ=255)
                                                                                                                           aGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATc                                                                                                                                     >  1:582565/1‑205 (MQ=255)
                                                                                                                            gT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa                                                                                                                                               <  1:8932/194‑1 (MQ=255)
                                                                                                                            gT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa                                                                                                                                               >  2:8932/1‑194 (MQ=255)
                                                                                                                            gT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCa                                                                                                     >  1:201535/1‑236 (MQ=255)
                                                                                                                                 ccTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGGTTACAAACTATCCCGGGATTGCTTCCGATCCCTTTGGGCTTGCAGTg                                                                                                  >  2:727858/1‑235 (MQ=255)
                                                                                                                                  cTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCa                                                                                                     <  2:46734/231‑1 (MQ=255)
                                                                                                                                  cTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGt                                                                                                   <  1:159957/233‑1 (MQ=255)
                                                                                                                                   tGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAatat                                                                                                                                                                                                     >  1:629484/1‑134 (MQ=255)
                                                                                                                                   tGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAatat                                                                                                                                                                                                     <  2:629484/134‑1 (MQ=255)
                                                                                                                                     aaCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTcc                                                                                             >  1:367140/1‑236 (MQ=255)
                                                                                                                                          cAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCg                                                                                                                      <  2:560848/206‑1 (MQ=255)
                                                                                                                                          cAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCg                                                                                                                      >  1:560848/1‑206 (MQ=255)
                                                                                                                                                    tCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTa                                                                              >  1:338573/1‑236 (MQ=255)
                                                                                                                                                    tCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCCGGGATTGCTACCGCACCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACCTa                                                                              >  2:722948/1‑236 (MQ=255)
                                                                                                                                                           aTGGCACCTTCAGTGCCGGATACAGTTACGGTAATGACAGCAGCCAATACAATTACGGGGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGtt                                                                                               <  1:693991/212‑1 (MQ=255)
                                                                                                                                                              gCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAAc                                                                    <  2:201535/236‑1 (MQ=255)
                                                                                                                                                                  cTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTTCCGGCGGCGTGGGTCTCCA‑TTCTCATAGCGTGACGCTCTCGCAATTTCTTGGCAACGGTTTTGCGCTTATTGATGCTAACGGAGCATCTGGCGTGGGGGACCAAAACTCTTCGGGGAATGCTTCCCGTCCTCTTGTCTATGACGTGGGTccctcac                                                                                        >  2:693991/1‑207 (MQ=255)
                                                                                                                                                                  cTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGGGAGGATACAAAACTATCCGGGGATTGCTACCGAACCTTTTGGCTATGCAGTGGTTCCTTATTTCACAACGTATTAGGaa                                                                       >  2:325244/1‑229 (MQ=255)
                                                                                                                                                                    tCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGtctc                                                              <  1:136933/236‑1 (MQ=255)
                                                                                                                                                                         tgcGGATACAGCTACGGTAATGACCGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGt                                                         <  2:338573/234‑1 (MQ=255)
                                                                                                                                                                         gCCGGATACAGCTACGGTAATGACAGCAGCCAATACCATTACGGCGTTCCCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGt                                                         <  1:311855/236‑1 (MQ=255)
                                                                                                                                                                            ggATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGt                                                         <  2:98661/233‑1 (MQ=255)
                                                                                                                                                                            ggATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGt                                                         <  1:8003/233‑1 (MQ=255)
                                                                                                                                                                                  aGCTGCGGTAATCGCAGCCGCCAATACCATTCCGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGAtacta                                                 <  2:270328/235‑1 (MQ=255)
                                                                                                                                                                                  aGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTTGCTATGCAGTGGGTCCTTATCTCACAACTTATCAGGGAAAACGTCTCTCGGTAGAtactat                                                >  2:197519/1‑235 (MQ=255)
                                                                                                                                                                                    cTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTCGAtactac                                                >  1:227465/1‑234 (MQ=255)
                                                                                                                                                                                       cGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTAtctc                                                                                      >  2:623170/1‑193 (MQ=255)
                                                                                                                                                                                       cGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTAtctc                                                                                      <  1:623170/193‑1 (MQ=255)
                                                                                                                                                                                         gTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTg                                         <  1:405047/236‑1 (MQ=255)
                                                                                                                                                                                                        aaTACAATTACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGAt                          >  1:139827/1‑236 (MQ=255)
                                                                                                                                                                                                         aTACAATTCCGGAGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATc                         <  2:519391/236‑1 (MQ=255)
                                                                                                                                                                                                               ttACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGtt                                                                                               >  1:390485/1‑160 (MQ=255)
                                                                                                                                                                                                               ttACGGCGTTACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGtt                                                                                               <  2:390485/160‑1 (MQ=255)
                                                                                                                                                                                                                      gttcacggcggCGTGGTTCGCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAaacaac            <  2:218928/231‑1 (MQ=255)
                                                                                                                                                                                                                      gTTACCGGCGGCGTTGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAaacaac            <  1:727858/236‑1 (MQ=255)
                                                                                                                                                                                                                       ttACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGaaccaac               >  1:530775/1‑232 (MQ=255)
                                                                                                                                                                                                                       ttACCGGCGGCGTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAAATTATCAGGAAAACCGTCTCTCGGTAGGTACTACCCAGATGACCGCTAACGTCGAACTTGaacaaac               >  2:536307/1‑232 (MQ=255)
                                                                                                                                                                                                                              cggcgTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAAACAACACAGTTtg    <  1:722948/236‑1 (MQ=255)
                                                                                                                                                                                                                               ggcgTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTCGATACTACGCAGCTGCCCGGTAACGTCGATCTTGTACAAACAACACAGctttt   >  2:411180/1‑234 (MQ=255)
                                                                                                                                                                                                                                 cgTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGCTAACGTCGAACTTTAACAAACAacaccgat      >  2:602806/1‑227 (MQ=255)
                                                                                                                                                                                                                                 cgTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAAACAACACAGTTtgtg  <  1:602806/235‑1 (MQ=255)
                                                                                                                                                                                                                                 cgTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAAACAACACAGTTtgtg  <  1:536307/235‑1 (MQ=255)
                                                                                                                                                                                                                                 cgTGGTTCTCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAAACAACACAGTTtgtg  <  1:411180/235‑1 (MQ=255)
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                    
CAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGT‑AGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCA‑TCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAAACAACACAGTTTGTG  >  NC_000913/3290563‑3291021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A