Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,290,794 |
A→C |
I661L (ATC→CTC) |
yraJ → |
putative outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,290,794 | 0 | A | C | 98.7%
| 512.5
/ ‑3.0
| 151 | I661L (ATC→CTC) | yraJ | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base C (70/77); total (72/79) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.23e-01 |
Only 100 of 169 total aligned reads displayed.
CGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTAT > NC_000913/3290697‑3290889
|
cGCCAGTTACCGTTCACCTTATGGCCCCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTtctc < 2:1187676/100‑1 (MQ=255)
cGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTtctc < 1:2039747/100‑1 (MQ=255)
gCCAGGTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcc > 2:3517586/1‑100 (MQ=255)
ncAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcca > 1:3235692/2‑100 (MQ=255)
ccAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcca < 1:280139/100‑1 (MQ=255)
ccAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcca < 1:2659586/100‑1 (MQ=255)
ccAGGTACCGTGCACCGTATGGCACCGTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctcca < 2:1318291/100‑1 (MQ=255)
cAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctccat < 2:1055790/100‑1 (MQ=255)
gTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctccatcc < 2:1766531/100‑1 (MQ=255)
gTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctccatcc > 2:2895884/1‑100 (MQ=255)
gTTACCGTCCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTctccatcc > 1:3880936/1‑100 (MQ=255)
ttACCGTTCACCTTACGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCt < 2:2932624/100‑1 (MQ=255)
aCCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCa < 2:2122820/100‑1 (MQ=255)
ccGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCAt < 1:2779872/100‑1 (MQ=255)
cGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATg > 1:1068839/1‑100 (MQ=255)
gTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATgg > 1:628438/1‑100 (MQ=255)
ttCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGc > 2:2160729/1‑100 (MQ=255)
aCCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTg < 2:2822918/100‑1 (MQ=255)
ctttATGGTACCTTCAGTGCCGGATACAGCTACGGTATTGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGa < 2:3617299/98‑1 (MQ=255)
ccTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGa < 2:1336168/100‑1 (MQ=255)
ccTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGa < 1:2549037/100‑1 (MQ=255)
ccTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGa > 1:2176522/1‑100 (MQ=255)
cTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGAc < 1:301838/100‑1 (MQ=255)
cTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGAc < 1:3008443/100‑1 (MQ=255)
cTTATGGCACCTTCAGTGAAGGATACAGCTACGGTAATGACATGAGACAATACAATTAAGTTGTTATCGGGGGAGAGGTCTTCCAGCCTCATGGAGTGaa > 2:1800660/1‑99 (MQ=255)
tATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGc > 1:3417122/1‑100 (MQ=255)
aTGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGct < 1:2656833/100‑1 (MQ=255)
ggCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGAGGTTCTCCATCCTCATGGCGTGACGctct > 1:3728902/1‑100 (MQ=255)
gCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCtctc > 1:1011212/1‑100 (MQ=255)
cACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCg < 2:306943/100‑1 (MQ=255)
cACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCg < 1:1275465/100‑1 (MQ=255)
aCCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCCCTCGc > 2:1131507/1‑100 (MQ=255)
ttCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAat > 1:1308820/1‑100 (MQ=255)
ttCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAat > 1:3036816/1‑100 (MQ=255)
tCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAata < 2:410498/100‑1 (MQ=255)
cAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAatat > 1:1794897/1‑100 (MQ=255)
gTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCt > 1:3643239/1‑100 (MQ=255)
gTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCt > 2:1535614/1‑100 (MQ=255)
tGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTg > 1:208379/1‑100 (MQ=255)
ccGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTggg < 2:2991724/100‑1 (MQ=255)
ccGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTggg < 1:3668967/100‑1 (MQ=255)
tACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACg > 1:199230/1‑100 (MQ=255)
cAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCt > 1:42440/1‑100 (MQ=255)
aGCGACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATCTCTGGGCAACGCtt > 2:3664121/1‑100 (MQ=255)
gCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCttt > 2:737049/1‑100 (MQ=255)
gCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCttt > 1:1943493/1‑100 (MQ=255)
tACGGTAATGACAGCAGCCAATAGAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTg < 1:1505936/100‑1 (MQ=255)
tACGGTAATGACAGCAGCCAATACAATTACGCCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTg < 2:410505/100‑1 (MQ=255)
aCGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTgc < 1:1137217/100‑1 (MQ=255)
cGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATACTCATGGCGTGACGATCTCGCAATATCTGGGCCACGCTTTTgcg > 1:3300435/1‑100 (MQ=255)
gTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCt > 1:1934353/1‑100 (MQ=255)
gTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCt < 2:1996282/100‑1 (MQ=255)
gTAATAACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGAGACGCCCTCGCACTTTCTGGGCAACGCTTTTGCGCt > 1:2564320/1‑100 (MQ=255)
tAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCtt > 2:393721/1‑100 (MQ=255)
aaTGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCCACGCTTTTGCGCTTa > 2:2206894/1‑100 (MQ=255)
ntGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTAt > 1:1018521/2‑100 (MQ=255)
tGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATc < 1:911105/100‑1 (MQ=255)
tGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATc < 1:1525780/100‑1 (MQ=255)
tGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATc < 2:312669/100‑1 (MQ=255)
gACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCg < 2:3680530/100‑1 (MQ=255)
agcagcCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATg < 1:2110883/100‑1 (MQ=255)
gcagcCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGc > 2:2808009/1‑100 (MQ=255)
gcagcCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGc < 2:2375692/100‑1 (MQ=255)
cagcCAATACAATTACGGCGTTACCTGCTGCTTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATGTGGGCAACGCTTTTGCTCTTATCGATGCt < 2:3643821/100‑1 (MQ=255)
cagcCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCt < 1:2830107/100‑1 (MQ=255)
agcCAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTa > 1:2222570/1‑100 (MQ=255)
ccAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAAc < 2:1643734/100‑1 (MQ=255)
cAATACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACg > 2:555419/1‑100 (MQ=255)
tACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAg < 2:2398753/100‑1 (MQ=255)
tACAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAg < 1:704465/100‑1 (MQ=255)
aCAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGc < 2:2110083/100‑1 (MQ=255)
aCAATTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGc < 1:3596450/100‑1 (MQ=255)
aaTTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCAt > 2:487513/1‑100 (MQ=255)
aaTTACGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCAt > 1:1529748/1‑100 (MQ=255)
cGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGc > 1:2005241/1‑100 (MQ=255)
cGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGc > 1:3819073/1‑100 (MQ=255)
cGGCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGc > 2:547990/1‑100 (MQ=255)
ggCGTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCg < 1:373904/100‑1 (MQ=255)
gTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGa > 1:1174188/1‑100 (MQ=255)
gTTACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGa > 1:1574485/1‑100 (MQ=255)
ttACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAg < 1:51951/100‑1 (MQ=255)
ttACCGGCGGCATGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTCGCGATGCTAACGGAACATCTGGCGTGAg < 1:3595023/100‑1 (MQ=255)
tACCGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGGTGCTAACGGAGCATCTGGCGTGAgg < 2:3185609/100‑1 (MQ=255)
ccGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGAt > 1:359382/1‑100 (MQ=255)
ccGGCGGCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGAt > 2:3316716/1‑100 (MQ=255)
cggcggCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa < 2:2519405/100‑1 (MQ=255)
cggcggCGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATa > 1:1654784/1‑100 (MQ=255)
ggcggcGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATAc < 1:2391301/100‑1 (MQ=255)
ggcggcGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATAc > 1:3275462/1‑100 (MQ=255)
ggcggcGTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATAc > 2:3613045/1‑100 (MQ=255)
cggcgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACACTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACaa < 1:3085435/100‑1 (MQ=255)
ggcgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACaaa > 1:1038861/1‑100 (MQ=255)
ggcgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACaaa < 1:2220530/100‑1 (MQ=255)
gcgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACaaaa < 2:1903593/100‑1 (MQ=255)
cgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAAc > 2:80921/1‑100 (MQ=255)
cgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAAc < 2:1574469/100‑1 (MQ=255)
cgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAAc < 1:685167/100‑1 (MQ=255)
cgTGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAAc < 2:1032958/100‑1 (MQ=255)
tGGTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTa > 1:3339985/1‑100 (MQ=255)
ggTTCTCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTAt < 1:497092/100‑1 (MQ=255)
|
CGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTAT > NC_000913/3290697‑3290889
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
