Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,602,989 |
T→G |
I419L (ATT→CTT) |
ftsY ← |
Signal Recognition Particle (SRP) receptor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,602,989 | 0 | T | G | 98.3%
| 634.4
/ ‑3.1
| 178 | I419L (ATT→CTT) | ftsY | Signal Recognition Particle (SRP) receptor |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base G (91/83); total (93/85) |
| Fisher's exact test for biased strand distribution p-value = 6.08e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 181 total aligned reads displayed.
GTGCCGTCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAATAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGCAG > NC_000913/3602892‑3603085
|
gtgccgtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAagag < 1:2240846/100‑1 (MQ=255)
gccgtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTc > 2:4760674/1‑100 (MQ=255)
gccgtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTc > 1:151092/1‑100 (MQ=255)
gccgtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTc < 2:104139/100‑1 (MQ=255)
cgtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAg < 2:2662979/100‑1 (MQ=255)
gtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGc < 2:149616/100‑1 (MQ=255)
tCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCa < 1:2138958/100‑1 (MQ=255)
aGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATaa > 1:773750/1‑100 (MQ=255)
aGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATaa > 2:4032092/1‑100 (MQ=255)
gTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAAc > 2:47826/1‑100 (MQ=255)
tttCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACt < 2:3844844/100‑1 (MQ=255)
cGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCa < 2:3740669/100‑1 (MQ=255)
cGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCa > 1:75000/1‑100 (MQ=255)
cGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCa < 1:2345216/100‑1 (MQ=255)
cGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCa > 1:2404194/1‑100 (MQ=255)
gTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCAt > 1:607422/1‑100 (MQ=255)
gTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCAt > 2:4418581/1‑100 (MQ=255)
tAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATgc < 1:3189778/100‑1 (MQ=255)
tAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTAACCGCGTTCTGCCCGGTGCTGGCCTCAAGAGTCAGCATAACTTAATga > 2:1355706/1‑99 (MQ=255)
aGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCGCGGTGCTGGCATCAAGCGTCAGCATAACTTCATgcg < 2:3535100/100‑1 (MQ=255)
cGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATgcggc < 2:3365924/100‑1 (MQ=255)
cGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATgcggc < 2:2563273/100‑1 (MQ=255)
tGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGgcgc > 1:2380644/1‑100 (MQ=255)
gATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCt < 1:2507271/100‑1 (MQ=255)
aTGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCtt < 2:3132330/100‑1 (MQ=255)
cGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAAc > 1:4066158/1‑100 (MQ=255)
cGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAAc < 1:3501842/100‑1 (MQ=255)
ggTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACg > 2:3993856/1‑100 (MQ=255)
tAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCg < 1:3273041/100‑1 (MQ=255)
tAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCg < 2:3766918/100‑1 (MQ=255)
gCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGt > 2:1240519/1‑100 (MQ=255)
ccAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGACGCTTCAACGTCGAGtt > 1:5128235/1‑100 (MQ=255)
aaCGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttc > 1:3311410/1‑100 (MQ=255)
aaCGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttc > 2:5201827/1‑100 (MQ=255)
aCGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttct > 2:2056931/1‑100 (MQ=255)
aCGGCTTCATGGAACAGTGTGGCCTGGCTTACCGCGTTCTGCCCGGTTCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttct < 2:1904831/100‑1 (MQ=255)
aCGGCTTCACGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttct < 1:1741576/100‑1 (MQ=255)
cGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttctt < 1:1192605/100‑1 (MQ=255)
cGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttctt < 1:10437/100‑1 (MQ=255)
ggCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttcttc < 1:5467424/100‑1 (MQ=255)
ggCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttcttc < 2:1111276/100‑1 (MQ=255)
gCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttcttag > 1:3830397/1‑98 (MQ=255)
cTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTtcat > 2:343351/1‑100 (MQ=255)
cTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTtcat > 1:3900031/1‑100 (MQ=255)
cTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTtcat > 1:2806636/1‑100 (MQ=255)
ttCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTtcatc > 1:4014486/1‑100 (MQ=255)
tCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTtcatca > 2:41933/1‑100 (MQ=255)
tGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCAcgc > 2:270149/1‑100 (MQ=255)
tGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCAcgc < 2:1726798/100‑1 (MQ=255)
tGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCAcgc > 1:2744954/1‑100 (MQ=255)
aCAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGAc < 1:1287210/100‑1 (MQ=255)
aCAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGAc < 2:2011528/100‑1 (MQ=255)
cAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACg > 1:1361323/1‑100 (MQ=255)
aGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATACCTTCATGCGGCGCTTCAACGTCGAGTCTCTTCATCACGCGGACGa > 1:5214196/1‑100 (MQ=255)
aGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGa < 2:5459433/100‑1 (MQ=255)
gTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGAt > 1:845180/1‑100 (MQ=255)
gTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGAt > 2:5378060/1‑100 (MQ=255)
gTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGAt > 2:4243291/1‑100 (MQ=255)
gTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGAt < 2:4266946/100‑1 (MQ=255)
ttGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGAttt < 2:4082766/100‑1 (MQ=255)
tGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAATAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGAtttt > 1:4033004/1‑100 (MQ=255)
gCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttct > 2:5116946/1‑100 (MQ=255)
cTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttcttc < 2:816330/100‑1 (MQ=255)
cTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttcttc > 2:222669/1‑100 (MQ=255)
cTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttcttc < 2:632918/100‑1 (MQ=255)
cTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttcttc < 1:5533899/100‑1 (MQ=255)
cTGGCTTACCGCGTTCGGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttcttc < 1:3577488/100‑1 (MQ=255)
tGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCa < 1:392541/100‑1 (MQ=255)
gCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAAc < 1:3390374/100‑1 (MQ=255)
cTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAAct > 1:3209492/1‑100 (MQ=255)
cTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAAct > 1:2502386/1‑100 (MQ=255)
cTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAAct > 1:1423921/1‑100 (MQ=255)
tACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAActct < 2:2154508/100‑1 (MQ=255)
aCCGAGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCtt > 2:4642154/1‑100 (MQ=255)
ccGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTc > 2:298577/1‑100 (MQ=255)
ccGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTc > 2:358270/1‑100 (MQ=255)
cgcgTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTcc > 1:4595533/1‑100 (MQ=255)
gTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATc > 2:3778246/1‑100 (MQ=255)
tCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAg < 1:3679687/100‑1 (MQ=255)
cTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGCTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCggg > 1:2270425/1‑100 (MQ=255)
gCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGGGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTg > 2:5075413/1‑100 (MQ=255)
gTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGAtt < 1:5104484/100‑1 (MQ=255)
gTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGAtt < 1:1688676/100‑1 (MQ=255)
gTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGAtt < 2:2779775/100‑1 (MQ=255)
cTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGt > 1:1541444/1‑100 (MQ=255)
cTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGt > 1:5004605/1‑100 (MQ=255)
cTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGt < 2:402284/100‑1 (MQ=255)
ggCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTc < 1:4282520/100‑1 (MQ=255)
ggCATCAAGAGTCAGCATAACTTCATGAGGCGCTTCCACGTCGAGTTTCTTCATCACGCGTACGATTTTCTTCATATCTTCAATCAGGTAAGATATGTTc > 2:2476278/1‑100 (MQ=255)
gCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCt < 2:270778/100‑1 (MQ=255)
cATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTg > 2:1651203/1‑100 (MQ=255)
cATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTg < 1:5406268/100‑1 (MQ=255)
aTCAAGAGTCAGCATAACTTCATGCTGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGc < 2:2316723/100‑1 (MQ=255)
aTCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTgn < 1:2638060/100‑2 (MQ=255)
aTCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGc > 2:496853/1‑100 (MQ=255)
tCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAATTCTTCCATCAGGTGCGATTTGTTCTGCa > 2:2460236/1‑100 (MQ=255)
tCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTGTTCCATCAGGTGCGTTGGGTTCTGCa > 1:5575815/1‑100 (MQ=255)
tCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGCa > 2:2444736/1‑100 (MQ=255)
tCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGCa < 1:4625337/100‑1 (MQ=255)
cAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGCAg > 1:3264027/1‑100 (MQ=255)
|
GTGCCGTCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAATAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGCAG > NC_000913/3602892‑3603085
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
