Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,602,989 |
T→G |
I419L (ATT→CTT) |
ftsY ← |
Signal Recognition Particle (SRP) receptor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,602,989 | 0 | T | G | 98.7%
| 544.8
/ NA
| 156 | I419L (ATT→CTT) | ftsY | Signal Recognition Particle (SRP) receptor |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base G (75/78); total (77/79) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 157 total aligned reads displayed.
GTGCCGTCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAATAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGCAG > NC_000913/3602892‑3603085
|
gtgccgtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAagag < 1:3637899/100‑1 (MQ=255)
gccgtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTc > 1:881086/1‑100 (MQ=255)
ccgtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCa < 1:1368975/100‑1 (MQ=255)
cgtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAg > 1:75454/1‑100 (MQ=255)
cgtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAg > 1:3208101/1‑100 (MQ=255)
gtCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGc > 1:2289285/1‑100 (MQ=255)
tCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCa < 1:3148397/100‑1 (MQ=255)
ccAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCAt > 1:2046403/1‑100 (MQ=255)
cAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATa < 2:1594618/100‑1 (MQ=255)
cAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATa > 1:3310959/1‑100 (MQ=255)
cAGTTTCGTTAGCGTGATGCCAGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATa < 1:3802615/100‑1 (MQ=255)
gTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAAc > 1:281562/1‑100 (MQ=255)
gTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAAc < 1:1908129/100‑1 (MQ=255)
cGTTAGCGTGATGCTGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATGAAGAGTCAGCATAACTTCa < 2:3657563/100‑1 (MQ=255)
gTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCAt > 1:103564/1‑100 (MQ=255)
gTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCAt > 1:1404420/1‑100 (MQ=255)
cGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATgcggc > 1:2975465/1‑100 (MQ=255)
gTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATgcggcg > 1:3088082/1‑100 (MQ=255)
tGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGgcgc < 1:1508194/100‑1 (MQ=255)
tGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGgcgc > 1:285549/1‑100 (MQ=255)
ccGGTTAAGCCAACGGCTTTATGGAACAGTTTGCCCGGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCGGCATAACGTCATGCGGCGCTGCaa > 2:709788/1‑100 (MQ=255)
ggTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACg > 2:1349087/1‑100 (MQ=255)
ggTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACg < 1:3392540/100‑1 (MQ=255)
ggTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACg < 1:1472724/100‑1 (MQ=255)
ggTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATACGGCGCTTCAACg > 1:3680948/1‑100 (MQ=255)
ggTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCGTACCGCGTTCTGCCCGGTGCTGGCATCAATAGTCAGCATAACTTCATGCGGCGCTTCAACg < 1:2394401/100‑1 (MQ=255)
gTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGt > 1:529111/1‑100 (MQ=255)
ttAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTc > 2:3001152/1‑100 (MQ=255)
tAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCg < 1:2788415/100‑1 (MQ=255)
aGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAg < 1:2854354/100‑1 (MQ=255)
gCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGt > 2:1700857/1‑100 (MQ=255)
gCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGt > 2:1216470/1‑100 (MQ=255)
gCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGt > 1:1639341/1‑100 (MQ=255)
ccAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGtt < 1:1404264/100‑1 (MQ=255)
aCGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttct < 2:1992118/100‑1 (MQ=255)
cGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttctt > 1:2826537/1‑100 (MQ=255)
cGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttctt < 1:3639632/100‑1 (MQ=255)
ggCTTCATGGAACAGTTTGGCCTAGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGGGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTttcttc < 2:1909585/100‑1 (MQ=255)
acTTCATGGAACAGTTTGGCCTGGCTTACCGCGTGCTGGCCGGTGCTGGCATTAATAGTCAGCATAACTTCATGTTGCGCTTCAACGTGGTGTTTCTtca > 2:1385935/2‑100 (MQ=255)
cTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTtcat > 1:3454299/1‑100 (MQ=255)
cTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTtcat < 2:1477806/100‑1 (MQ=255)
ttCCTGGCACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTtcatn < 1:3263913/100‑2 (MQ=255)
ttCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTtcatc > 2:2434051/1‑100 (MQ=255)
ttCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTtcatc > 2:2665371/1‑100 (MQ=255)
aTGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCAcg > 2:2552649/1‑100 (MQ=255)
tGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCAcgc > 1:123388/1‑100 (MQ=255)
tGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCAcgc > 1:274026/1‑100 (MQ=255)
tGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCAcgc > 1:1368917/1‑100 (MQ=255)
ggAACAGTTTGGCCTTGCTTACCGCGTGCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTTATGCGGGGCGTCAACGTCGAGGTTCTTCATCAcgcc > 2:864271/1‑99 (MQ=255)
ggAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCAcgcg > 2:75169/1‑100 (MQ=255)
ggAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCAcgcg < 2:2622650/100‑1 (MQ=255)
gAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCgg > 1:2584108/1‑100 (MQ=255)
aCAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGAc < 2:2930413/100‑1 (MQ=255)
cAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACg > 1:1033197/1‑100 (MQ=255)
aGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGa > 1:2600568/1‑100 (MQ=255)
ttcgCCTTGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCAAGTTTCTTCATCACGCGGACGAttt < 2:1840605/97‑1 (MQ=255)
tGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGAtttt < 2:3857500/100‑1 (MQ=255)
ggCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttc < 2:967719/100‑1 (MQ=255)
gCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttct < 2:1675921/100‑1 (MQ=255)
gCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttct < 2:3975150/100‑1 (MQ=255)
gCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttct < 2:1373189/100‑1 (MQ=255)
cTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttcttc < 2:1177233/100‑1 (MQ=255)
cTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttcttc < 2:3092243/100‑1 (MQ=255)
cTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttcttc < 2:3146667/100‑1 (MQ=255)
cTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttcttc < 1:1442087/100‑1 (MQ=255)
cTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTttcttc < 1:1993147/100‑1 (MQ=255)
tGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCa > 2:3809084/1‑100 (MQ=255)
gCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAAc < 1:1913596/100‑1 (MQ=255)
gCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAAc < 2:518716/100‑1 (MQ=255)
gCTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCAGGCGGCGTTTCAACGTCGAGTTTCTGCATCACGCGGACGATTTTCTTCAAc < 2:739272/100‑1 (MQ=255)
cTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAAct > 1:3948087/1‑100 (MQ=255)
cTTACCGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAAct < 2:1011626/100‑1 (MQ=255)
ccGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTc > 2:3666599/1‑100 (MQ=255)
ccGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTc < 1:661575/100‑1 (MQ=255)
ccGCGTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTc < 1:1566209/100‑1 (MQ=255)
cgTTCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATTCGGCGCTTCCACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCAt > 2:654620/1‑100 (MQ=255)
ttCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCa < 1:3746079/100‑1 (MQ=255)
ttCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCa < 1:1247059/100‑1 (MQ=255)
ttCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCa < 1:490467/100‑1 (MQ=255)
tCTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAg < 1:2160036/100‑1 (MQ=255)
cTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAgg < 2:862460/100‑1 (MQ=255)
cTGCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAgg < 2:3570447/100‑1 (MQ=255)
gCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTg > 2:1468150/1‑100 (MQ=255)
gCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTg > 2:239912/1‑100 (MQ=255)
gCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTg > 1:3703235/1‑100 (MQ=255)
gCCCGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTg > 1:2426285/1‑100 (MQ=255)
cccGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGc > 2:1287444/1‑100 (MQ=255)
ccGGTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCg > 2:1495811/1‑100 (MQ=255)
cGGTGCTAGCATCAAGAGTCAGCATAACCTCATGCTGCGCTTGAACGTCGACTTTCTTCATCCAGCGTAAGATTTTCTTCAAATCTTCCATCAGGTGCGa < 2:1090911/100‑1 (MQ=255)
ggTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGAt < 2:2461557/100‑1 (MQ=255)
gTGCTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGAtt < 1:3521167/100‑1 (MQ=255)
gCTGGCATCAAGGGTCAGCATAACTCCATGCGGCGCTTCAACGCCGAGGTTCTTCATCACGCAGACGATATTCTTCCACTCTTCCACCACGAGCGCTTTg > 2:2217116/1‑100 (MQ=255)
cTGGCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGt > 2:445869/1‑100 (MQ=255)
ngCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTc > 1:992016/2‑100 (MQ=255)
ggCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTc < 2:3306477/100‑1 (MQ=255)
ggCATCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTc < 1:98456/100‑1 (MQ=255)
cATCAAGAGACAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTg > 2:2041997/1‑100 (MQ=255)
aTCAAGAGTCAGCATAACTTCAGGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGc < 2:3344317/100‑1 (MQ=255)
tCAAGAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGCa > 1:3305498/1‑100 (MQ=255)
cAAGAGTCAGCATAACTTCATGCGGCGCTTCAAAGTCGAGCTTGTTCATCACGCGGGAGACTGTCTTCAACTCTTCCATCCGGCGCGAGTTGTTCtcccc > 2:2395805/1‑96 (MQ=255)
|
GTGCCGTCCAGTTTCGTTAGCGTGATGCCGGTTAAGCCAACGGCTTCATGGAACAGTTTGGCCTGGCTTACCGCGTTCTGCCCGGTGCTGGCATCAATAGTCAGCATAACTTCATGCGGCGCTTCAACGTCGAGTTTCTTCATCACGCGGACGATTTTCTTCAACTCTTCCATCAGGTGCGATTTGTTCTGCAG > NC_000913/3602892‑3603085
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
