Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I51 R1
|
223 |
69.9 |
1534784 |
95.1% |
1459579 |
214.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,790,919 |
A→C |
L143V (TTA→GTA) |
tdh ← |
L‑threonine 3‑dehydrogenase, NAD(P)‑binding |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,790,919 | 0 | A | C | 100.0%
| 202.1
/ NA
| 60 | L143V (TTA→GTA) | tdh | L‑threonine 3‑dehydrogenase, NAD(P)‑binding |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (33/27); total (33/27) |
AGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCA > NC_000913/3790687‑3791145
|
agaTTTTCTTTGCCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCAGAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGACGGGATCACAAATTGAGGCTACGTc > 2:416494/1‑236 (MQ=255)
tCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCCAAAATTGTGGCTACGTCATCggg > 2:689082/1‑235 (MQ=255)
gTTAACCGACCGGGTGATCCCCTTTTTCCCCGCCAGCTCAAGGCGGTATTCGTTAACATCAGCGATCACCACATTGCGCGCCCCAACGTTTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCg < 1:714823/235‑1 (MQ=255)
tAACCGCACGGGTTATACCCATTTTACGCGACAGCTCAAGGCGTTATTCGTTAACATCAGTGATCCCCAAATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATATTACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCggg < 1:536170/235‑1 (MQ=255)
aCGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGGCTTTGGAAAAATTTTCGTGGGttttta > 2:686488/1‑234 (MQ=255)
aCGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAAATGCGGCAACGTCAACGGAAATATTGTCGGGGGTTTTgc > 2:97291/1‑235 (MQ=255)
tccccATTTTCCGCGCAAGCTCAAGGCGGTATTCGTAAACATAAGTGATCCCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGtt < 1:409417/233‑1 (MQ=255)
cATTTGCCGCGCCAGCTCAAGGCGTTATTCGTTAACATCAGTAACCCCCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATg < 1:686488/236‑1 (MQ=255)
ttttACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGCTCAAAAATTGCGGCTACGGCATCGGGAATATGTTCGGGGGTTTTGATAGGGTTGAGTGcc > 2:409417/1‑236 (MQ=255)
ttttACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGcc > 1:719140/1‑236 (MQ=255)
ttttACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGAATGCACGGCGTTACCGAAGGGGTCAAAAAATGCGGCTACGTACTCGGAAACAATGACGTGGATCTTGAATGCGTGTAATGcc > 2:478978/1‑236 (MQ=255)
ttagacggaccAGCACAGGGTGTTTTTCGTAAACACCAGTGATCACCACATTGGGTGCACCACGTTGTTCCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGcc < 2:504495/227‑1 (MQ=255)
cgcgCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGa > 1:578757/1‑235 (MQ=255)
cgcgCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGa > 1:585787/1‑235 (MQ=255)
ccagtccAAGGCGGTTTTCGTTAACATCGGTGATCCCCCCATTGCGTCCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCAcc < 1:63685/230‑1 (MQ=255)
ccAGCTCAAGGCGGTTTTCGTTAACATCAGTGATCCCCACATTGCGTGCACCAACGTTTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCAcc < 1:749430/236‑1 (MQ=255)
cATCGGGGATCACCAAATGGCGTCCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCgg < 1:416494/235‑1 (MQ=255)
gTGATCACCACATTGCGTCCACCAGCGTTTTTCCCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGAtt < 1:634839/236‑1 (MQ=255)
accacATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAacac > 2:758562/1‑235 (MQ=255)
cacaTTGCATGCACCAACGTTTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCaa < 1:376112/236‑1 (MQ=255)
aTTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCa > 2:308945/1‑232 (MQ=255)
aTTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTCTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCa > 2:372451/1‑232 (MQ=255)
ttccGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCgg < 1:90676/229‑1 (MQ=255)
aaCCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACAACTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATGTTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATggg < 1:743257/235‑1 (MQ=255)
cgccgcTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTa > 2:550921/1‑235 (MQ=255)
tGCAATAATCCCAAGCGGGCCAGCACCAGAAACCAGCACATCTTC‑CGCACACAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCCCCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTTCGGCACAAATGGGTACGaccac < 2:147331/236‑1 (MQ=255)
cATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGaccac < 2:440298/233‑1 (MQ=255)
cAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTg < 1:689082/236‑1 (MQ=255)
aTCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCg > 2:646020/1‑236 (MQ=255)
aTCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCg < 1:478978/236‑1 (MQ=255)
aTCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCg > 2:764704/1‑236 (MQ=255)
gCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGGCAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTTCGGCaa > 1:746517/1‑235 (MQ=255)
gCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATGAACACCCAGGCCTATCGTGTTGCGGCACAAATGGGTACGACCAACACGAAAGTTgtacccag > 2:115967/1‑229 (MQ=255)
tGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGAc > 1:401246/1‑236 (MQ=255)
gCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAAt < 1:646020/232‑1 (MQ=255)
gCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGAc < 1:372451/235‑1 (MQ=255)
caacataaaCCAGGCCATCTTCGCCCAC‑CAGATCAAACGGCAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACca < 2:746517/230‑1 (MQ=255)
cACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGAcc < 1:547017/235‑1 (MQ=255)
ccAGTAACTAGCACTGCTTCGCCCGC‑CAGTGCAAACGACAGCGCGGTAGTCACGGCTTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACcaca < 2:131726/236‑1 (MQ=255)
cAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGAc < 1:648707/209‑1 (MQ=255)
cAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGAc > 2:648707/1‑209 (MQ=255)
cacaTCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACCAATGGGTACGACTACCACGACAGTTGCGGCAATGACCACAGGTGataatg > 2:741540/1‑232 (MQ=255)
cGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTTCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGcc > 1:180136/1‑235 (MQ=255)
aTCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGGGATATGGCCTTCGCTCGAAACGCGa > 2:544561/1‑235 (MQ=255)
aTCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGCGATATGGCCCTCGCCCGAAAcgcgc > 2:100033/1‑234 (MQ=255)
aaCGGCAGCGCGGTATTCACGGCGTTACCGAAGGGATCAAAACTTGCGGCTACGTCATCGGAAATATTGGCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGcc < 2:719140/236‑1 (MQ=255)
aGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGGGATATGGCCTTCGCCAGAAACGCGATCGCCGATCt > 1:598960/1‑235 (MQ=255)
aGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACACCAGGTGATATGGCCTTCGCCAGAAACCCGATAGCCGACCtt > 2:524432/1‑236 (MQ=255)
cgGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAg > 1:56733/1‑236 (MQ=255)
tATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGGACGACCACCACGACAGTTCCGGCCATGACCACAGTGGCAATGGCCTTCGCCAGAAACCCGTACGCCGACCCTGAAAcc > 2:35260/1‑235 (MQ=255)
tGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAATCAGCTCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAAATACCACAGGTGATATGGCCTTCGCCAGAAACGCGAGTGCCACTCTTGCAGccg > 2:463165/1‑233 (MQ=255)
cACGGCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTc < 1:758562/235‑1 (MQ=255)
gCGTTACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGGCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTc < 1:308945/236‑1 (MQ=255)
tACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGTAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGAACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGa > 1:709626/1‑236 (MQ=255)
tACCGAAGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATAGCCGATCTTGAAGCCTTTCACTTCCTGa > 1:501728/1‑236 (MQ=255)
aaGGGATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAAt < 1:544561/236‑1 (MQ=255)
gggATCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCCATGACCCCAGGTAATATGGCCTTCGCCAGAAAAGCGATATCCGATCTTGAAGCCTTTCACTTTCTgtcactgac > 2:584067/1‑228 (MQ=255)
tCAAAAATTGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAAtacct > 1:701185/1‑234 (MQ=255)
ttGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCa < 1:741540/236‑1 (MQ=255)
tGCGGCTACGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCa > 1:450714/1‑235 (MQ=255)
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AGATTTTCTTTGGCGACGTTAACCGCACGGGTGATACCCATTTTACGCGCCAGCTCAAGGCGGTATTCGTTAACATCAGTGATCACCACATTGCGTGCACCAACGTGTTTCGCCACCGCCGCTGCCATAATACCAATCGGGCCTGCACCAGAAACCAGCACATCTTCGCCCAC‑CAGATCAAACGACAGCGCGGTATGCACGGCGTTACCGAAGGGATCAAAAATTGCGGCTAAGTCATCGGAAATATTGTCGGGGATTTTGAAGGCGTTGAATGCCGGGATCACCAGATATTCGGCAAAGCAGCCCGGGCGATTAACACCAACGCCTATCGTGTTGCGGCACAAATGGGTACGACCACCACGACAGTTGCGGCAATGACCACAGGTGATATGGCCTTCGCCAGAAACGCGATCGCCGATCTTGAAGCCTTTCACTTCCTGACCAATACCTACCACTTCA > NC_000913/3790687‑3791145
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
