Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,499,550 |
A→C |
intergenic (+50/+43) |
insD1 → / ← yjgX |
IS2 transposase TnpB/pseudogene fragment |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,499,550 | 0 | A | C | 97.7%
| 451.6
/ ‑2.1
| 132 | intergenic (+50/+43) | insD1/yjgX | IS2 transposase TnpB/pseudogene fragment |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base C (60/69); total (62/70) |
| Fisher's exact test for biased strand distribution p-value = 6.00e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 |
Only 100 of 132 total aligned reads displayed.
CAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTAT > NC_000913/4499453‑4499646
|
cAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCACATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCt > 2:2587008/1‑100 (MQ=255)
cAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCt < 1:275812/100‑1 (MQ=255)
cAGCGGGCTTGTAATGGGTTAACTGATACCAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCt < 1:3713695/100‑1 (MQ=255)
gggCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTc < 1:3068891/100‑1 (MQ=255)
gggCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTc < 1:1649799/100‑1 (MQ=255)
ggCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCa > 1:275693/1‑100 (MQ=255)
gCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAg < 2:1089464/100‑1 (MQ=255)
gCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAg < 2:3111957/100‑1 (MQ=255)
gCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAg < 1:3348914/100‑1 (MQ=255)
gCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAg > 2:3433574/1‑100 (MQ=255)
cTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGt > 2:3044141/1‑100 (MQ=255)
cTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGt > 1:673234/1‑100 (MQ=255)
ttGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTa > 1:2145326/1‑100 (MQ=255)
ttGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTa > 1:3193167/1‑100 (MQ=255)
tGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTAc > 1:415914/1‑100 (MQ=255)
atctaTGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTAc < 1:958130/96‑1 (MQ=255)
gTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACa < 2:2276280/100‑1 (MQ=255)
gTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACa > 2:1085795/1‑100 (MQ=255)
tAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACaa > 1:1004426/1‑100 (MQ=255)
aaTGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAg < 1:3230411/100‑1 (MQ=255)
aaTGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAg > 1:1150135/1‑100 (MQ=255)
aaTGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAg < 1:2004853/100‑1 (MQ=255)
aTGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACagat > 2:938063/1‑97 (MQ=255)
gggTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGa > 2:2466758/1‑100 (MQ=255)
ggTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGAc > 2:1738360/1‑100 (MQ=255)
tAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGt > 2:2863263/1‑100 (MQ=255)
aaGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTa < 1:3171662/100‑1 (MQ=255)
aGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTAt < 1:2843538/100‑1 (MQ=255)
gTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTAtt > 2:1757896/1‑100 (MQ=255)
gATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACGGAATCCTTTTCAGTACAAGCGACTGTATTAc < 1:3266149/100‑1 (MQ=255)
gATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTAc > 1:2401354/1‑100 (MQ=255)
gATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTAc < 1:3281073/100‑1 (MQ=255)
gATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTAc < 1:429883/100‑1 (MQ=255)
tAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAg < 2:1698824/100‑1 (MQ=255)
tAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAg < 1:151770/100‑1 (MQ=255)
tAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAg < 1:460613/100‑1 (MQ=255)
aaCAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGt > 1:3910322/1‑100 (MQ=255)
aCAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTc > 2:2330122/1‑100 (MQ=255)
cAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCt < 1:2956284/100‑1 (MQ=255)
gATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGc < 2:1007733/100‑1 (MQ=255)
gATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTAATACAGTcgct < 2:2384040/100‑4 (MQ=39)
aTGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGcc < 2:1922709/100‑1 (MQ=255)
tGTCTGGAAATATAGGGGCAAATCCCCCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCa < 2:3958871/100‑1 (MQ=255)
gTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCat < 2:1555625/100‑1 (MQ=255)
gTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCat > 1:944594/1‑100 (MQ=255)
cttgAAATATAGGGGCAAATCCACCTTGTGGTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTGCAGTCTGCCatat < 2:1169605/97‑1 (MQ=255)
cTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCatat > 2:1430733/1‑100 (MQ=255)
tGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCatata > 1:48892/1‑100 (MQ=255)
ggAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCatatat > 2:919734/1‑100 (MQ=255)
gAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATg < 1:697608/100‑1 (MQ=255)
gAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATg > 1:880923/1‑100 (MQ=255)
aaaTATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGa > 1:30049/1‑100 (MQ=255)
aaaTATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGa < 2:2848001/100‑1 (MQ=255)
taGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTAcc < 1:1165849/100‑1 (MQ=255)
taGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTAcc < 2:2045316/100‑1 (MQ=255)
taGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGAATAcc < 2:3377960/100‑1 (MQ=255)
ggggCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCtg > 2:271968/1‑100 (MQ=255)
ggggCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCtg < 1:837121/100‑1 (MQ=255)
ggCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATAGATGATTACCtgtg > 2:67229/1‑100 (MQ=255)
aaTCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCa < 1:1392868/100‑1 (MQ=255)
aTCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAg > 2:3563953/1‑100 (MQ=255)
aTCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAg > 2:3745078/1‑100 (MQ=255)
aTCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGACTGCCATATATGATTACCTGTGATCAg > 1:116342/1‑100 (MQ=255)
cACCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGgaa < 1:2625268/100‑1 (MQ=255)
aCCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGgaag > 1:3848191/1‑100 (MQ=255)
aCCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGgaag > 2:3199747/1‑100 (MQ=255)
aCCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGgaag > 2:2215967/1‑100 (MQ=255)
aCCTTGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGgaag < 1:1767132/100‑1 (MQ=255)
ttGTGCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAAt > 2:3526043/1‑100 (MQ=255)
tgtgCTGATACGAATACGGATATTTTATACAGAATACTTTTGAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATa < 2:600836/100‑1 (MQ=255)
gCTGATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGt < 2:1447903/100‑1 (MQ=255)
tGATATGATTACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTgg > 2:3840918/1‑100 (MQ=255)
gATATGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGc < 2:1342316/100‑1 (MQ=255)
tatGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTg > 2:1308654/1‑100 (MQ=255)
tatGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTg > 1:1300909/1‑100 (MQ=255)
tGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAg > 2:911762/1‑100 (MQ=255)
tGAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAg < 1:1694601/100‑1 (MQ=255)
gAATACGGATATTTTATACAGCATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATACATGATTACATGTGATCAGGAAGAATAAGTGGCTGAgg < 2:2194497/100‑1 (MQ=255)
gAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCTTATATGCTTACCTGTGATCAGGAAGAATAAGTGGCTGAgg > 2:3611805/1‑100 (MQ=255)
gAATACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAgg < 2:3765895/100‑1 (MQ=255)
gAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAgg > 1:1543988/1‑100 (MQ=255)
gAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAgg > 2:1194975/1‑100 (MQ=255)
aaTACGGATCTTTTATACAGAATCCTTTTCAGTACAGGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGt < 2:2193653/100‑1 (MQ=255)
aaTACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGt < 2:1153606/100‑1 (MQ=255)
aTACGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGtt < 2:2783535/100‑1 (MQ=255)
aCGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGtttn < 1:3250336/100‑2 (MQ=255)
cGGATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCa > 1:192421/1‑100 (MQ=255)
ggATATTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCaa < 1:1377875/100‑1 (MQ=255)
atatTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAAc < 1:1550804/100‑1 (MQ=255)
atTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTg > 1:265029/1‑100 (MQ=255)
atTTTATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTg > 2:2256304/1‑100 (MQ=255)
tttATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTc < 1:2007005/100‑1 (MQ=255)
tttATACAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTc < 1:495273/100‑1 (MQ=255)
tttATACAGAATCCCTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTc < 2:3660670/100‑1 (MQ=255)
cAGAATCCTTTTCAGTACAAGCGACTGTATTATAGTCTGCCATATATGATTAACAAAAAAAAAAAAAAATAAGTGGCTGAGGTTTCAAACTGTCTGCCgg < 2:1979113/100‑1 (MQ=255)
cAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCgg > 2:610697/1‑100 (MQ=255)
cAGAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCgg < 2:47052/100‑1 (MQ=255)
cAGAATCCTTTTCAGTACAAGCGACCGTATTACAGTCTGCCATATATGATCACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCgg < 2:677084/100‑1 (MQ=255)
gAATCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGta < 1:2285822/100‑1 (MQ=255)
aaTCCTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGtat > 1:2222353/1‑100 (MQ=255)
|
CAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGTCTGCCGGTAT > NC_000913/4499453‑4499646
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
