Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F75 I1 R1	9	203.9	5537866	95.6%	5294199	174.4

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,006,859	A→C	S200R (AGC→CGC)	ygeW →	putative carbamoyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,006,859	0	A	C	99.6%	980.4 / NA	256	S200R (AGC→CGC)	ygeW	putative carbamoyltransferase
Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (136/119); minor base T (1/0); total (137/119)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 256 total aligned reads displayed.

CGACGATATGTATCTGGGCGCAGGCAACGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGA  >  NC_000913/3006627‑3007093

        tGTATCTGGGCGCAGGCAACGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCg                                                                                                                                                                                                                              <  1:1284575/239‑1 (MQ=255)

           attggggCGCAGGCAGCGCCTATATGCGGGAAGTGGGGGCTGCACTTGATGACGGTTACAAGAAGGGTGTACTGCCGCAGCGTCCGGCTTTAGGGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGct                                                                                                                                                                                                                            <  2:1348362/234‑1 (MQ=255)

               gggCGCAGGCAACGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGctc                                                                                                                                                                                                                           >  2:2495259/1‑235 (MQ=255)

                ggCGCAGGCAACGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTa                                                                                                                                                                                                                                        >  1:1571547/1‑221 (MQ=255)

                ggCGCAGGCAACGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGctc                                                                                                                                                                                                                           >  2:262478/1‑234 (MQ=255)

                ggCGCAGGCAACGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGctc                                                                                                                                                                                                                           >  1:1842637/1‑234 (MQ=255)

                ggCGCAGGCAACGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTAGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGctc                                                                                                                                                                                                                           >  1:704314/1‑234 (MQ=255)

                  cgcAGGGAACGCCTAGATGTGTGACGTTGGCGCTGCGCTTGATGATGGTTACAAGGAGGGTGTATCGCCGCAGCGTCCGGCTTTAGTGACCCTGCAATGCGATAGTGACCACCCGACTCAATCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGtg                                                                                                                                                                                                                     <  2:914093/238‑2 (MQ=255)

                       gCAAGGCCTATATGCGTGAAGTTGGCGCTGCACTTGAGGACGGTTAAAAGCAGGGTGTCCTGCCACAGCGTCCGGCTCTAGTGAGCCGGCAATGCGACATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTAGGTTCACTGGAAACCCTGAAAGGTAAAAAAATCGCCATGACCGGGGCCTACTCTCCGCGCTATGGCAAACCGcg                                                                                                                                                                                                                            <  2:37435/226‑2 (MQ=255)

                           cGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGGGGACTGCAACAGCGTCCGGCTTTAGTGAGCCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGTTGAACTCGCGTGGTTACGAGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACGTGGGCAGTCTCTCCATGCTATGGCAAACCGCTTTCTGTACTCCAAGGc                                                                                                                                                                                                            >  2:2220545/1‑238 (MQ=255)

                               tataTGCGGTAAGTTAGCGTTTCACTTGATCAAGGTTACAAGCAGGGTGTATTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGcatcat                                                                                                                                                                                                       <  2:1061570/239‑1 (MQ=255)

                                 tatGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCg                                                                                                                                                                                                     >  1:1684003/1‑239 (MQ=255)

                                 tatGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCAACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACcac                                                                                                                                                                                                                 <  1:1161902/227‑1 (MQ=255)

                                 tatGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCAACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACcac                                                                                                                                                                                                                 >  2:1161902/1‑227 (MQ=255)

                                     cGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGcatca                                                                                                                                                                                                        >  2:2069502/1‑232 (MQ=255)

                                      gTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCgg                                                                                                                                                                                                    >  1:991176/1‑235 (MQ=255)

                                       tGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCtga                                                                                                                                                                                               >  1:939583/1‑239 (MQ=255)

                                       tGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCtga                                                                                                                                                                                               >  1:2424149/1‑239 (MQ=255)

                                          aGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCtgatg                                                                                                                                                                                             <  2:2596431/238‑1 (MQ=255)

                                                    gCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAAcc                                                                                                                                                                                                                               <  2:2628019/194‑1 (MQ=255)

                                                           atgaCGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTAt                                                                                                                                                                               <  2:2424149/235‑1 (MQ=255)

                                                            tgaCGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATg                                                                                                                                                                          <  1:182694/239‑1 (MQ=255)

                                                             gaCGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGt                                                                                                                                                                         <  1:2069502/239‑1 (MQ=255)

                                                              aCGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATg                                                                                                                                                                          <  2:124613/237‑1 (MQ=255)

                                                               cGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATg                                                                                                                                                                              >  1:1374902/1‑232 (MQ=255)

                                                                  ttACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGctct                                                                                                                                                                                                                          <  1:2082164/185‑1 (MQ=255)

                                                                    aCAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGGCCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCg                                                                                                                                                                                                                              >  2:1622023/1‑179 (MQ=255)

                                                                          aGGGTGTACTGCCACAGCGTCCGGCTTTATTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGACCACTTTGGTTAACTGGAAAACCTGAAAGGAAAAAAAACCGCCATGACCTGGGCTTACTCTCCACGCTATTGCAAACGGCTCTCTGTACCACACGGAATCTTCGGTCTGCTGACTCGATTCGGTATGGATGTCACACGGGCGCa                                                                                                                                                             >  2:2549250/1‑238 (MQ=255)

                                                                          aGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCa                                                                                                                                                             >  1:2699719/1‑238 (MQ=255)

                                                                          aGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCa                                                                                                                                                             >  1:1177548/1‑238 (MQ=255)

                                                                            ggTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCg                                                                                                                                                                                                                              <  2:699150/171‑1 (MQ=255)

                                                                            ggTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCg                                                                                                                                                                                                                              >  1:699150/1‑171 (MQ=255)

                                                                            ggTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGctct                                                                                                                                                                                                                          <  1:1227275/175‑1 (MQ=255)

                                                                                      cacaGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCAATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCACACGGAAGGCTAc                                                                                                                                                >  2:214148/1‑239 (MQ=255)

                                                                                        caGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATc                                                                                                                                                           <  1:39562/226‑1 (MQ=255)

                                                                                        caGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACg                                                                                                                                               >  1:2484106/1‑238 (MQ=255)

                                                                                          gCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGa                                                                                                                                              >  2:1511556/1‑237 (MQ=255)

                                                                                          gCGGCCGGCTTTAGTGAACCTGCAATGCGATATTAACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATACGGAAGGCTActa                                                                                                                                              >  2:2543398/1‑235 (MQ=255)

                                                                                           atccccgCTTAAGTGACCCTGCAAGGCAGTATTGACCACCCGACGCAGTCAATGGCTGACCCCGCGTGGTTACGTGAACCCTTTCGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGGCCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACGCGCTTCGGTATGGATGTCACCCTGGCCCTTCCGGAAGGCTACGACCt                                                                                                                                           <  2:939583/233‑1 (MQ=255)

                                                                                            gcccGGCTTTAGTGAACCTGCAATGCGAAATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGGCCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCt                                                                                                                                           <  2:612109/236‑1 (MQ=255)

                                                                                            gTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCt                                                                                                                                           <  1:2495259/238‑1 (MQ=255)

                                                                                            gTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCt                                                                                                                                           <  1:228888/238‑1 (MQ=255)

                                                                                            gTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCt                                                                                                                                           <  2:1292676/238‑1 (MQ=255)

                                                                                             tCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGctct                                                                                                                                                                                                                          >  2:2514205/1‑158 (MQ=255)

                                                                                             tCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGctct                                                                                                                                                                                                                          <  1:2514205/158‑1 (MQ=255)

                                                                                                     tAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGAt                                                                                                                                 >  2:1423347/1‑239 (MQ=255)

                                                                                                     tAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGAt                                                                                                                                 <  1:1423347/239‑1 (MQ=255)

                                                                                                            ccTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGct                                                                                                                                                                                                                            <  2:2086144/141‑1 (MQ=255)

                                                                                                            ccTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTg                                                                                                                          >  1:2179407/1‑239 (MQ=255)

                                                                                                               gCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAg                                                                                                                       >  1:1509927/1‑239 (MQ=255)

                                                                                                                 aaTGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTg                                                                                                                     >  1:1455936/1‑239 (MQ=255)

                                                                                                                  aTGCGATATTGACCACCCGACTCAGTAAATGGCTGACATCGCGAGGTTACGTGAACACTTTGGTTAACTGGAAAACCTGAAAGGTAAAAAAATCGACATGACCTGGGCCTAATCTCCACGAAATGGCAAACCGCTCTCTGAACCACAAGGCCTCACCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATACGGAAGGCTACGACCTGATCCCGGATGTGGTTGCAggg                                                                                                                     >  2:848298/1‑236 (MQ=255)

                                                                                                                   tGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGAc                                                                                                                                             <  1:286986/213‑1 (MQ=255)

                                                                                                                    gCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAg                                                                                                                       <  1:803968/234‑1 (MQ=255)

                                                                                                                    gCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCg                                                                                                                  <  1:1086135/239‑1 (MQ=255)

                                                                                                                        tatTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGct                                                                                                                                                                                                                            >  2:772412/1‑129 (MQ=255)

                                                                                                                        tatTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGct                                                                                                                                                                                                                            <  1:772412/129‑1 (MQ=255)

                                                                                                                        tatTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGCAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGCCTGATGACTCGCTTCGGTCTGGTTGTCACCCTGGCCCATCCGGCAGGCTACGACCTGAGCCCGGATGTGGTTGACGTGGCGcaac                                                                                                              >  2:1554686/1‑238 (MQ=255)

                                                                                                                             accaccCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAACGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGACGTGGTTGAAGAGGCGAACACCAAt                                                                                                         >  2:2326587/1‑239 (MQ=255)

                                                                                                                             accaccCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGct                                                                                                                                                                                                                            <  1:2129437/124‑1 (MQ=255)

                                                                                                                               caccCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGa                                                                                                                                                       <  2:317693/191‑1 (MQ=255)

                                                                                                                               caccCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGa                                                                                                                                                       >  1:317693/1‑191 (MQ=255)

                                                                                                                                  ccGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGa                                                                                                                                                       <  2:2694717/188‑1 (MQ=255)

                                                                                                                                  ccGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTaa                                                                                                    >  1:2471260/1‑239 (MQ=255)

                                                                                                                                      cTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGcc                                                                                                <  1:135552/239‑1 (MQ=255)

                                                                                                                                            cAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCa                                                                                                                                                                                                                                   <  1:1965201/102‑1 (MQ=255)

                                                                                                                                            cAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCa                                                                                                                                                                                                                                   >  2:1965201/1‑102 (MQ=255)

                                                                                                                                            cAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTc                                                                                              <  1:848298/235‑1 (MQ=255)

                                                                                                                                                  cTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAg                                                                                     <  2:2484932/238‑1 (MQ=255)

                                                                                                                                                   tGACCTCGCGCGGTTACGGGAACACTTTGGTTCACCGGAAAACTTGAAAGGCAAAAAAATAGCCATGATCTGGGCCTACTCTCCACGCTATGTCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCCTCGGAATGGCTGTTACTCTAGCCCATCCGGAAGGCTACGACCTGATCCCAGTTGTGGTCTAAGTGGCGAATAACAATGCTATAGCATCCggtgcgag                                                                                     >  2:1829866/1‑233 (MQ=255)

                                                                                                                                                     aCCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCtt                                                                                                                                                                                     <  2:41452/139‑1 (MQ=255)

                                                                                                                                                     aCCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCtt                                                                                                                                                                                     <  2:927385/139‑1 (MQ=255)

                                                                                                                                                     aCCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCtt                                                                                  >  1:543388/1‑238 (MQ=255)

                                                                                                                                                     aCCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCACGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATg                                                                                                                                                                          >  1:923003/1‑150 (MQ=255)

                                                                                                                                                                 tACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCAc                                                                      <  1:746249/238‑1 (MQ=255)

                                                                                                                                                                 tACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCAc                                                                      <  1:1610570/238‑1 (MQ=255)

                                                                                                                                                                      gAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAg                                                                   >  1:94165/1‑236 (MQ=255)

                                                                                                                                                                           atttGTTTCACTGGAAAGCCTGGAAGGTAAATAAGTCGCGAATATCGGGGCCTTCTCGCCACGCTATGGCAAACCGCTCCCTGTACCACGAGGCAGCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGAGCCCGGATGTTGTTGAAGTGGCGGAAAACAATGCTAAAGCCTCCGGTGGGAGCTTCCGTCAGTTCACCAGCATGgaag                                                           <  2:1876646/238‑1 (MQ=255)

                                                                                                                                                                                 ttCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCt                                                     >  2:283394/1‑239 (MQ=255)

                                                                                                                                                                                    aCTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCa                                                  <  1:417998/239‑1 (MQ=255)

                                                                                                                                                                                    aCTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCa                                                  <  1:2549250/239‑1 (MQ=255)

                                                                                                                                                                                    aCTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGACTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCa                                                  <  1:368699/239‑1 (MQ=255)

                                                                                                                                                                                      tGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGACAAACAATGCTACAGCCTCCGGTGGTAGCTTCCGTCAGGTCAACCGCATGGAAGAAGCATTCaa                                                 >  2:366063/1‑238 (MQ=255)

                                                                                                                                                                                          aacccTGAAAGGTCAAAAAATCGCCATGACCTGGGACTACTGTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGCCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCACCCGGAAGGGTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGGCAGGTCACCAGCATGGAAGAAGCCTTCAAAGGCg                                            <  2:943240/236‑1 (MQ=255)

                                                                                                                                                                                          aaaCCTGAAAGGTAAAAAAATCGCCCTGAGCTTGGCCTACTCTCCCCGCTATGGCAAACCGCTCTCTGGACCAAAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACg                                            <  2:2566832/239‑1 (MQ=255)

                                                                                                                                                                                                gAAAGGTAAAAAAATCGCCCTGACCTGGGACTACTCTCAACGCTATGGGAAACACCTCTCTGTACCACAAGGCATCATCGGACAGATGACTAGCTTCGGTATGGATGTAACCCTGGCCCATCAGGAAGGATACGACCTGATCCCGGCTGAGGATGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCCTCCGTCAGGCCACCAGCATGGAAGTATCCTTCAAAGATGCAGAc                                       >  2:2259615/1‑238 (MQ=255)

                                                                                                                                                                                                   agcgaaataaatCGGCAAGACCTGGGTCTACTCTCCACGGAATGGCATACCGTGCTCTGTTCCACATGGCGTCATCGGGCTAATGACTCGCTGCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGGGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCCCCAGCATGGAAGAAGCCTTCAAAGACGCGGACATCg                                   <  2:565336/235‑1 (MQ=255)

                                                                                                                                                                                                       aaaaaaaTCGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGct                                                                                                                                                                                                                            <  2:707093/50‑1 (MQ=255)

                                                                                                                                                                                                               cGCCATGACCTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGACGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGAACAAAGCCTTCAAAGACGCAGACATCGTTTCTCCGAAg                        >  2:4198/1‑238 (MQ=255)

                                                                                                                                                                                                                       ccTGGGCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCa               <  1:1025199/239‑1 (MQ=255)

                                                                                                                                                                                                                       ccTGGCTCTACTCTCCACGCTATGGCAAACCGCTCTCTGTGCCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGc                <  2:1177548/238‑1 (MQ=255)

                                                                                                                                                                                                                            gCCTACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGaaaaa                                                                                                             <  1:1740183/140‑1 (MQ=255)

                                                                                                                                                                                                                               tACTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACaa       <  1:2643044/239‑1 (MQ=255)

                                                                                                                                                                                                                                aCTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCt                                                                                   <  1:2261057/162‑1 (MQ=255)

                                                                                                                                                                                                                                aCTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACaaa      >  1:259383/1‑239 (MQ=255)

                                                                                                                                                                                                                                aCTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACaaa      >  2:1751640/1‑239 (MQ=255)

                                                                                                                                                                                                                                aCTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACaaa      >  2:1693385/1‑239 (MQ=255)

                                                                                                                                                                                                                                aCTCTCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACaaa      >  2:1239630/1‑239 (MQ=255)

                                                                                                                                                                                                                                 ctctCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAg     <  1:262478/239‑1 (MQ=255)

                                                                                                                                                                                                                                 ctctCCACGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAg     >  2:1111596/1‑239 (MQ=255)

CGACGATATGTATCTGGGCGCAGGCAACGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGA  >  NC_000913/3006627‑3007093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A