Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F113 I0 R1
|
46 |
122.5 |
6222771 |
91.8% |
5712503 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,248,432:1 |
(G)5→6 |
100% |
coding (660/663 nt) |
yqjA → |
general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,248,427 | 1 | . | G | 71.3%
| 236.0
/ 107.9
| 94 | coding (655/663 nt) | yqjA | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Reads supporting (aligned to +/- strand): ref base . (16/11); new base G (44/23); total (60/34) |
| Fisher's exact test for biased strand distribution p-value = 6.37e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 |
Only 100 of 106 total aligned reads displayed.
CCAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGG > NC_000913/3248330‑3248522
|
ccAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gg > 1:618733/1‑100 (MQ=255)
ccAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gg > 2:2131734/1‑100 (MQ=255)
cAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑ggg > 1:1092559/1‑100 (MQ=255)
ctcTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg < 1:153776/98‑1 (MQ=255)
atcTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg < 1:631772/98‑1 (MQ=255)
gcggATGTCATGCCTGATGTTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGGTCTCTGGTCGTTTTATGGAAAAAGAAATATGGAAATC‑ggcg < 2:1112015/96‑3 (MQ=255)
gCTGGTGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGTAGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg < 2:2921713/99‑1 (MQ=255)
gCTGATGTCATGTCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg‑g < 2:2541820/100‑1 (MQ=255)
gCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg‑g > 1:790103/1‑100 (MQ=255)
gCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑gggg‑g < 1:2939586/100‑1 (MQ=255)
cTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑ggggag > 2:153774/1‑98 (MQ=255)
tGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑Ta < 1:53479/100‑1 (MQ=255)
gTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAgg < 1:2766014/100‑1 (MQ=255)
gTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAgg > 1:992103/1‑100 (MQ=255)
tCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAggg > 2:2506804/1‑100 (MQ=255)
tCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAggg < 1:1902755/100‑1 (MQ=255)
cATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGa > 2:1217712/1‑100 (MQ=255)
cATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGAt > 2:524272/1‑100 (MQ=255)
cATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGAt > 1:104254/1‑100 (MQ=255)
aggcgtGATGCGGCTCTCGGTGGTGCTGCTGGTGTGTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAggg < 2:2528647/93‑1 (MQ=255)
tGCCTGGTGCTGCTCCTGGTGGTGCTGATGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGATATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAgg < 2:1133183/96‑1 (MQ=255)
ccTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGGTG‑TAAGGGATGCa < 1:2048360/100‑1 (MQ=255)
tGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGGTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCa < 2:594811/97‑1 (MQ=255)
tgctgcTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATAc > 2:2439680/1‑100 (MQ=255)
tgctgcTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATAc < 1:858391/100‑1 (MQ=255)
tgctgcTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATAc > 1:39223/1‑100 (MQ=255)
tgctgcTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATAcc > 2:1386241/1‑100 (MQ=255)
tgctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCt > 2:565438/1‑99 (MQ=255)
tgctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTc > 1:880333/1‑100 (MQ=255)
gctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCg < 1:747803/100‑1 (MQ=255)
ctCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCa > 2:1024763/1‑100 (MQ=255)
ggtggtGCTGCTGGTGTTTGGCCTGGCAGGTTCTCGGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTc < 1:1035522/100‑1 (MQ=255)
tggtgCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGc > 1:2741243/1‑100 (MQ=255)
tgctgcTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCg > 1:1117478/1‑100 (MQ=255)
gctgctGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCg < 1:2585844/100‑1 (MQ=255)
gctgctGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCg > 1:618873/1‑100 (MQ=255)
gctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTAGCCa > 2:1112952/1‑100 (MQ=255)
ctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCa > 2:1996048/1‑99 (MQ=255)
ctgGTGTTTGGCCTGGCAGGTTCTCTGGTCGTATTATGGTAAGAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAg < 2:2182522/100‑1 (MQ=255)
cgggTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAg > 1:2114564/3‑100 (MQ=255)
ggTGTTTTGCCTGGCAGGTTCTCTGGTGGCGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCGAATACCTCGCATGTCGCTTCGCCAGc < 2:2893215/99‑1 (MQ=255)
ggTGTTTGGCCCGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCt > 2:1434975/1‑100 (MQ=255)
gtgtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTa < 1:2864801/100‑1 (MQ=255)
gtgtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAGATACCTCGCATGTCGCTTCGCCAGCTAg > 2:362314/1‑100 (MQ=255)
gtgtTTGGCCTGGCAGGGTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTa < 2:2741215/100‑1 (MQ=255)
tgtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAg > 1:474096/1‑100 (MQ=255)
gtTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGc > 1:521388/1‑100 (MQ=255)
gtTGGGGCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGcc < 2:784809/100‑1 (MQ=255)
tgtGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGcc < 1:1609412/98‑1 (MQ=255)
ggCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTgg < 1:2262727/100‑1 (MQ=255)
ggCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTgg > 1:2651533/1‑100 (MQ=255)
gCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGt > 1:700993/1‑100 (MQ=255)
gCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑GAAGGGATGCAAATACCTCGCATGTCGCTTCGCGAGATAGcat > 2:2438504/1‑95 (MQ=255)
ccTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTc > 1:1522324/1‑100 (MQ=255)
cTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTcc > 1:2223515/1‑100 (MQ=255)
tGGCAGGTTGTCGGGTCGTGTTATGGAAACAGTAAGATGTATATCGGGGG‑G‑TACGGGTTGCAAATAAATCGCATGGCGCTTCGCCAGCTAGCCTgg < 2:1429199/96‑1 (MQ=255)
tGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCgg < 1:524274/100‑1 (MQ=255)
gggaGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTcc < 2:239130/94‑1 (MQ=255)
ggCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGgc > 1:1009593/1‑100 (MQ=255)
gCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCggn < 2:1006150/100‑2 (MQ=255)
gTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGt > 1:3063532/1‑100 (MQ=255)
ctctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAGGGGATGCAAATACCTAGCATGTCGCTTCGCAAGCTAGCCTGGTCCGGCGCTGttt > 2:746873/1‑100 (MQ=255)
ctctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGttt > 1:1574131/1‑100 (MQ=255)
tctGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGtttt > 1:817390/1‑100 (MQ=255)
tGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTAc > 1:2555426/1‑100 (MQ=255)
ggtggtGTGATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTAc < 2:2542426/98‑1 (MQ=255)
ggTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACt > 1:2818210/1‑100 (MQ=255)
ggTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACt > 2:1238480/1‑100 (MQ=255)
ggTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACtt > 1:2070919/1‑100 (MQ=255)
tCGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTc > 2:1820819/1‑100 (MQ=255)
cGTGTTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCt < 1:1460067/100‑1 (MQ=255)
tgtTATGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTgg < 1:2447302/100‑1 (MQ=255)
gtTAAGGAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTgg > 2:2668473/1‑99 (MQ=255)
ttATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGGTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCg > 2:409556/1‑100 (MQ=255)
tATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCgg < 1:1386250/100‑1 (MQ=255)
tGGAAAAAGAAATATGGAAATC‑GGGG‑GATAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGc > 1:682998/1‑100 (MQ=255)
ggAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCa > 1:1531390/1‑100 (MQ=255)
gAAAAAGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCAc > 1:276037/1‑100 (MQ=255)
aaaaGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGc > 2:1187470/1‑100 (MQ=255)
aaaaGAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATAACTCGCATGTCGCTTCGCCAGCTAGCCTGGTCAGGCGCTGTTTTACTTCTGGTCGGc > 2:692616/1‑96 (MQ=255)
aaaaGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCt > 1:1569124/1‑100 (MQ=255)
aaGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGt < 2:2415290/100‑1 (MQ=255)
gAAATATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGtt > 2:317063/1‑100 (MQ=255)
aaTATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGc > 1:2550932/1‑100 (MQ=255)
aaTATGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGc < 1:1092824/100‑1 (MQ=255)
atatGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCt > 1:1079209/1‑100 (MQ=255)
atatGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCt > 1:2340561/1‑100 (MQ=255)
atatGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTg > 1:1188785/1‑100 (MQ=255)
tatGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTg < 1:937499/100‑1 (MQ=255)
atGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCCCGCTGTTGCTgg > 2:1788916/1‑100 (MQ=255)
tGGAAATCGGGGG‑G‑TAAGGGATGCAAATATCTCGCCTGTCGCTTCGCCAGCTAGCCTGGTGCGGCGGTGGTTTATTTCTGGTCGGCACGCTGTTGCt > 2:529707/1‑97 (MQ=255)
tGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGc > 1:1940677/1‑100 (MQ=255)
tGGAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGc < 2:521386/100‑1 (MQ=255)
tGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGcc > 1:321248/1‑100 (MQ=255)
ggAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGcc < 1:317065/100‑1 (MQ=255)
ggAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCGTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGcc < 1:609420/100‑1 (MQ=255)
gAAATCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCt > 1:1075046/1‑100 (MQ=255)
aaaTCGGGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCGGTTGCTGGc > 2:39408/1‑97 (MQ=255)
aaaTC‑GGGG‑G‑TAAGGGATGCACATACCTCGCATGTCGCTTCGCCTGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTgg < 1:2481782/100‑1 (MQ=255)
aaaTC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTg > 1:30659/1‑99 (MQ=255)
|
CCAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATC‑GGGG‑G‑TAAGGGATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGG > NC_000913/3248330‑3248522
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
