Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F210 I0 R1
|
188 |
159.1 |
7866933 |
93.3% |
7339848 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,333,582:1 |
(A)8→9 |
100% |
intergenic (‑131/‑128) |
rplU ← / → ispB |
50S ribosomal subunit protein L21/octaprenyl diphosphate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,333,574 | 1 | . | A | 87.5%
| 303.0
/ 39.6
| 104 | intergenic (‑123/‑136) | rplU/ispB | 50S ribosomal subunit protein L21/octaprenyl diphosphate synthase |
| Reads supporting (aligned to +/- strand): ref base . (6/7); new base A (48/43); total (54/50) |
| Fisher's exact test for biased strand distribution p-value = 7.70e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 125 total aligned reads displayed.
CCTTTTCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCTTTG > NC_000913/3333475‑3333668
|
ccTTTTCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑g‑aag > 2:2520232/1‑100 (MQ=255)
ccTTTTCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑g‑aag < 1:183548/100‑1 (MQ=255)
ccTTTTCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑g‑aag > 1:3624291/1‑100 (MQ=255)
ttttCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑g‑aag‑‑aa < 1:3861843/100‑1 (MQ=255)
ttCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTTCTACAGTCAATACAC‑G‑AAG‑‑aaaa > 2:2040889/1‑100 (MQ=255)
ttCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑aaaa > 2:1390375/1‑100 (MQ=255)
aaTGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑a < 1:1738330/100‑1 (MQ=255)
aTGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑aa > 2:3866461/1‑100 (MQ=255)
aTGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑aa > 1:3927991/1‑100 (MQ=255)
gATTCAGAGTGCGCTATAAATATTCACATTAGGGCGTGAATATTACGAAAAACGAACGCCTTGGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑aaac < 1:3324515/100‑3 (MQ=255)
gATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑aaac < 1:822143/100‑3 (MQ=255)
gATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCAAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑aaac < 2:3558697/100‑3 (MQ=255)
aTTCAGAGTGCGCTATAAATATTCACAATAGGGTGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑aaac < 1:3022738/99‑3 (MQ=255)
ttCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑g‑aag‑‑aagatcggaaga > 1:2634133/1‑90 (MQ=255)
tCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑aaacaca < 1:1983472/100‑6 (MQ=255)
tCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑aaacaca < 1:1955768/100‑6 (MQ=255)
cAGAGTGCGCTATAAATATTCACAATAGTGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑AAAAAA‑AAaacaca > 2:1193116/1‑98 (MQ=255)
cAGAGTGCGCTATAAATATTCACAATAGGGCGCGACTATTACGCAAAACGCACGCCTTTGAAAAGTGATACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑aaacaca > 1:3485167/1‑94 (MQ=255)
cAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTAACAAATTCTACAGTCAATACAC‑G‑AAG‑‑aaaaaa‑aaacacca > 1:1325928/1‑94 (MQ=255)
agagTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAAc < 1:2443196/100‑1 (MQ=255)
agagTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAAc < 2:1362454/100‑1 (MQ=255)
gTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTg < 1:958776/100‑1 (MQ=255)
tGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTAATACAGACAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTg > 1:1076262/1‑99 (MQ=255)
tcttccgatctatTCACAATAGGGCGCGAATATTACGAAAAACACACGCCTTTGACACGTGCTACAGTCAATACAC‑G‑AAAA‑AAAAAA‑AACACAACTTGTa < 2:3752428/90‑1 (MQ=255)
gcgcTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTa > 2:571543/1‑100 (MQ=255)
cgcTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTAc > 2:1979423/1‑100 (MQ=255)
gcTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTAAATAAAA‑G‑AAGA‑AAAAAA‑AACACAACTTGTACg < 1:677041/100‑1 (MQ=255)
cTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTAc > 1:2481552/1‑98 (MQ=255)
cTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACgg > 2:3283456/1‑100 (MQ=255)
tataAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACgg < 1:1957598/99‑1 (MQ=255)
ataAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AAGACAACTTGTACGATa > 1:3870953/1‑100 (MQ=255)
aaaTATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACAAAACTTGTACgtgaac > 2:384909/1‑95 (MQ=255)
atatTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACACCTTGTACGGTAACGt > 2:3589655/1‑100 (MQ=255)
tatggaaaaTAGGGCGCTAATATTACGTAAAACGTACGCTTTTGATAAGTGCTATAGTTTATAAAA‑A‑AAAA‑AAAAAA‑AACACAACTTGTACGGTAACGt < 2:3149295/92‑1 (MQ=255)
cacaATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACACAA‑AAA‑‑AAAAAA‑AACACAACTTGTACGGTAACGTTTa > 1:1049192/1‑98 (MQ=255)
cacaATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGtaaat > 1:2585363/1‑95 (MQ=255)
cacaATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATc < 1:2750607/100‑1 (MQ=255)
cacaATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAA‑G‑AAGAAAAAAAA‑AACACAACTTGTACGGTAACGTTGAt > 2:691617/1‑100 (MQ=255)
caATAGGGCGCGAATATTACGCAAAACGCACGCCTTTTACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCt > 1:266155/1‑99 (MQ=255)
aGGGCGCTAATATTACGTAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGcc < 1:938525/100‑1 (MQ=255)
aGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGcc > 2:2668572/1‑100 (MQ=255)
gggCGCGAATATTACGCAAAACGCACGCCTTTGACAATTGCTACAGTTAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGcc < 1:3619037/99‑1 (MQ=255)
gggCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCa > 1:3389100/1‑100 (MQ=255)
cgcgAATATTACGCAAAACGCACTCCTTTGACAATTTCTACAGTCAATACAC‑GAAAA‑‑AAAAAA‑AACACAACTTATACGGAAACGTTTATCTGTGCCAtt > 1:132303/1‑99 (MQ=255)
cgcgAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCAttt > 2:3920959/1‑100 (MQ=255)
cgAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACATTTATCTGTGCCAttttt > 2:1728108/1‑100 (MQ=255)
gAATATTACGCAAAACGCTCGCCTTTGACAAGTGCTACAGTCTTTACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCAtttttn < 1:567308/100‑2 (MQ=255)
gAATATTACGCAAAACGCACGACTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCAttttt < 2:1860313/99‑1 (MQ=255)
aataatACGTAAAACACACTCATTTGACAAGTACTACAGTCAATACAC‑GAAAA‑‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGACATTTTTTc < 2:3489429/100‑1 (MQ=255)
aaTATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTc < 1:3843610/100‑1 (MQ=255)
aaTATTACGCAAAACGCAAGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTc < 1:2933635/100‑1 (MQ=255)
aaTATTACGAAAAATGCACGCTTTTGTCAAGTGTTACAGTTAATACAT‑G‑AAGA‑AAAAAA‑AACACAACTGGTACGGTAACGTTTATCTGTGCCATTTTTTc < 1:1580577/100‑1 (MQ=255)
atatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCa < 2:3624252/100‑1 (MQ=255)
atatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCa < 2:2785233/100‑1 (MQ=255)
atatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCa < 2:3389062/100‑1 (MQ=255)
tatTACGTAAAACGCACGCCTTTGACAATTGTTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAg < 1:3587483/100‑1 (MQ=255)
tatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTTAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAg < 1:3123476/100‑1 (MQ=255)
tatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGTCAtttttt > 2:1741085/1‑97 (MQ=255)
tatTAAGCAAAACGCACGCCTTTTACAAGTGTTATTGTTAATAAAT‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAg < 1:861663/100‑1 (MQ=255)
atTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑AAAAAACAACACAACTTGTACGTTAACTTTTATCTGTGCCAtttttt > 2:43700/1‑96 (MQ=255)
atTACGCAAAACGCACGCCTTTGACAAGTGCGACAGTAAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGt < 2:1695546/100‑1 (MQ=255)
cGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTCTTTGTGCAATTTTTTCAGTACaa > 2:1696296/1‑100 (MQ=255)
gCAAATCGCACGCCTTTGACAAGTGTTACTGTTAATACAT‑G‑TAG‑‑AAAAAATAACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAAt < 1:499765/100‑1 (MQ=255)
gCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAAt > 2:1885208/1‑100 (MQ=255)
cAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTTTACGATAACGTTTATCTTTGCCATTTTTTCAGTACAAt > 1:3251482/1‑99 (MQ=255)
cAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTAAACAGAAACAAATAACTGTGCCATTTTTTCAAAACaa > 1:397698/1‑98 (MQ=255)
cAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AAAACAACTTTTACCGTAACGCTTATCTGTACCATTTTTTTAGttctact > 2:2123319/1‑94 (MQ=255)
aaaaCGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACAGAAACATATATCTGTGCCATTTTTTCATTACAATCa > 1:1028110/1‑100 (MQ=255)
aaaCGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTAAGTAAAATCAc > 2:258046/1‑100 (MQ=255)
aaaCGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGATAACGTTTATCTGTGCCATTTTTTGAGTACAATCa > 2:1156505/1‑99 (MQ=255)
cacgcCTTTGACAAGTGCTACAGTCAATACCC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCAAAGCCATTTTTTAATTACAATCAACCt > 1:868145/1‑98 (MQ=255)
acgcCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGCAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCtat > 2:1681134/1‑99 (MQ=255)
ggcCTTTGACAAATGCTACAGGCAATACAT‑G‑AAGA‑AAAAAA‑AACACAACTTCTACAGAAAAAATAATATGTGCCATTTTTTCAGTAAAATCAAACTatat > 2:1269042/2‑100 (MQ=255)
ccTTTGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACTGTAACGTTTATCTATACCAAATTTTAACTACAATAACAATATAtt > 1:1712007/1‑99 (MQ=255)
tttGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTcc < 1:2529473/99‑1 (MQ=255)
ttGACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTa < 2:2869868/100‑1 (MQ=255)
gACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGTTAACGTTAAACAATACCAATTTTTCAAAACAATCACCCTATATTCATaa > 1:1810925/1‑99 (MQ=255)
gACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTaan < 1:1050644/100‑2 (MQ=255)
gACAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAAc < 2:1247302/100‑1 (MQ=255)
gACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAAcc < 1:177307/100‑1 (MQ=255)
aCAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCATTTTAATTACCCTATATTCCTAAcc > 1:1387217/1‑100 (MQ=255)
aCAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAAcc < 1:1455431/100‑1 (MQ=255)
aCAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAAcc < 2:2720752/100‑1 (MQ=255)
cAAGTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACCGTAACGTTTATCAGTGCCATTTTTTCATTATAATCAACCTATAtttata > 2:107047/1‑92 (MQ=255)
aaagacTACAGTTAATAAACAA‑AAA‑‑AAAAAA‑AACACAACTTGTACTGTAACGTTTATCTGTGCTATTTTTTCAGTACAATCACCCTATATTCCTAACCa < 2:3501372/94‑1 (MQ=255)
gTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTAAAATAAAATCACCCTATATTCCTAACCATaa > 1:1690814/1‑100 (MQ=255)
gTGCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTACCATTTTTTCAGTACAATCACCCTATATTCCTAATCATaa > 2:413591/1‑100 (MQ=255)
gCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTTCTAACCATAAAc > 1:3133362/1‑100 (MQ=255)
gCTACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAAc < 1:3814559/100‑1 (MQ=255)
tACAGTCAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAAccc < 2:724479/100‑1 (MQ=255)
tACAGTCAATACAC‑G‑AAG‑‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCt > 2:387133/1‑100 (MQ=255)
cAATACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGtt > 1:1331842/1‑100 (MQ=255)
aaTAAAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGt < 2:2928401/98‑1 (MQ=255)
tACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGcc < 2:2204357/100‑1 (MQ=255)
tACAC‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATAACCCTATATTCCTAACCATAAACCCTAAGTTGcc > 1:1525330/1‑100 (MQ=255)
cac‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCtt > 2:749156/1‑100 (MQ=255)
cac‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCAATTTTTTCAGTACAATCACTCTATATTCATAACTATAAACCCTAAGTTGCCtt > 2:870588/1‑100 (MQ=255)
c‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCtt > 2:845311/1‑98 (MQ=255)
c‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCTTTg < 1:3292909/100‑1 (MQ=255)
c‑G‑AAGA‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAATACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGACtt > 2:215611/1‑98 (MQ=255)
|
CCTTTTCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATACAC‑G‑AAG‑‑AAAAAA‑AACACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCTTTG > NC_000913/3333475‑3333668
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
