Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F244 I0 R1
|
270 |
114.4 |
5840133 |
93.3% |
5448844 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,551,608 |
G→A |
100% |
intergenic (‑312/‑28) |
gntP ← / → uxuA |
fructuronate transporter/mannonate hydrolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,551,608 | 0 | G | A | 85.8%
| 239.8
/ 30.9
| 106 | intergenic (‑312/‑28) | gntP/uxuA | fructuronate transporter/mannonate hydrolase |
| Reads supporting (aligned to +/- strand): ref base G (7/8); new base A (46/45); total (53/53) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.52e-01 |
Only 100 of 106 total aligned reads displayed.
TTATACGCCATCTCATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTCAGGCGGG > NC_000913/4551512‑4551703
|
ttATACGCCATCTCATCCGATGCAACGCCACGGCTGCTGTCTGGTTGTTCATCCGGATACCTAAACTACTCCCGGGTTCCGCGTCTCTTTGCTGTGAAAc < 1:338530/100‑1 (MQ=255)
ttATACGCCATCTCATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAAc < 2:1572184/100‑1 (MQ=255)
tataCGCCATCTCATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAAcc > 2:1937731/1‑100 (MQ=255)
tataCGCCATCTCATCCGATGCAACGCCACGGCTGCGGACTGGTTGTTAATCCGGATACCTAAACAACTCCAGGGTTCCGCGACTCTTTGCTGTGAAAcc > 1:822934/1‑100 (MQ=255)
ataCGCCATCTCATCCTATGCAACGCCACGGCTGCTGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAAccc < 2:1995388/100‑1 (MQ=255)
aCGCCATCTCATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCAGCGTCTCTTTGCTGTGAAACCCAc > 1:2441038/1‑100 (MQ=255)
gCCATCTCATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTa < 1:2511436/100‑1 (MQ=255)
ccATCTCATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTAt < 1:1464861/100‑1 (MQ=255)
cATCTCATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTAtg < 2:2410741/100‑1 (MQ=255)
aTCTCATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTAtg > 1:822570/1‑99 (MQ=255)
ctcATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGTATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTAtgtg > 1:2381028/1‑99 (MQ=255)
ctcATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGa < 1:2289962/100‑1 (MQ=255)
aTCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAag > 1:510159/1‑100 (MQ=255)
aTCCGATGCAACGACACGGCTGCGTTCTGGTTGTCCATGCGGATACCTAAACAACTCCAGCGTTCCTCGTCCCCTTCCTGTGAAACCCAc > 1:1799496/1‑90 (MQ=255)
tCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAaga < 2:1668180/100‑1 (MQ=255)
ccGATGCAACGCCACGGCTGCGGTCTGGTTGTTCCTCCGGATACCTACACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCCCTATGTGAAagag > 1:432785/1‑100 (MQ=255)
ccGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAagag < 1:1890578/100‑1 (MQ=255)
ccGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAagag < 2:2776358/100‑1 (MQ=255)
ccGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAagag < 1:1203740/100‑1 (MQ=255)
gCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGaaaa > 2:858459/1‑100 (MQ=255)
cAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTACACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGaaa > 1:2506383/1‑98 (MQ=255)
cAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGaaaaa > 2:2156898/1‑100 (MQ=255)
cAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGaaaaa > 2:1776570/1‑100 (MQ=255)
aCGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATc > 2:526022/1‑100 (MQ=255)
cGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCa > 2:1170848/1‑100 (MQ=255)
ccACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATg < 2:1824338/100‑1 (MQ=255)
cACGGCTGCGGTCTGGTTGTTCATCCGGTTACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATg < 2:2167259/99‑1 (MQ=255)
cACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATgg < 1:1495059/100‑1 (MQ=255)
cACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATgg > 2:1655267/1‑100 (MQ=255)
cACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATg < 1:2681085/99‑1 (MQ=255)
aCGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTAAACGTCTCTTTGCTGTGAAACCCACTAAAAAAAAAAAAAAAAATCATg < 1:527757/98‑1 (MQ=255)
aCGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACCCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGa < 1:1950945/100‑1 (MQ=255)
ggCTGCGGTCTGGTTTTTCATCCGGGTACCTAAACAACTCCAGTGGTCCGCGTCTCTTGGCAGTGAAACCCACTATGTGAAAGAGCAAAACTCATGGAAc < 1:2217510/100‑1 (MQ=255)
ggCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAAc < 1:2257632/100‑1 (MQ=255)
gCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACa > 1:218990/1‑100 (MQ=255)
cGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGAcc > 1:1668720/1‑100 (MQ=255)
gTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTg < 2:1397623/100‑1 (MQ=255)
tCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTgg < 2:2842311/100‑1 (MQ=255)
cTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGgc < 2:1061641/100‑1 (MQ=255)
ggTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGgcgc > 1:1779020/1‑100 (MQ=255)
tgttCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTgg < 2:164922/100‑1 (MQ=255)
tgttCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTgg < 2:101250/100‑1 (MQ=255)
gttCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGt < 1:1235269/100‑1 (MQ=255)
ttCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGt < 1:1627651/99‑1 (MQ=255)
tCATTCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCCTTGCTGTGAAGCCCACTATGTGAATGAGGAAAAATCATGGAACAGACCTTGCGCTGGTAc < 1:336027/100‑1 (MQ=255)
cATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACg > 2:1850655/1‑100 (MQ=255)
cATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACg > 2:818875/1‑100 (MQ=255)
aTCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACgg < 1:1876391/100‑1 (MQ=255)
tCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAACAGTCATGGGACAGAACTGGCGCTGGt > 1:2421971/1‑95 (MQ=255)
tCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGc > 2:2201970/1‑100 (MQ=255)
tCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGc > 1:2870215/1‑100 (MQ=255)
tCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGc > 2:597088/1‑100 (MQ=255)
ccGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGcc > 2:126484/1‑100 (MQ=255)
gATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCaa > 2:1123715/1‑100 (MQ=255)
gATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCaa < 1:540425/100‑1 (MQ=255)
gATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCaa < 2:2405226/100‑1 (MQ=255)
aTACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAATCCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCaaa < 1:419221/100‑1 (MQ=255)
ccTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAACTCATGAAACAGACCAGGCGCTGGTACGGCCCAAACGa > 1:1966601/1‑100 (MQ=255)
ccTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGa > 1:2371590/1‑100 (MQ=255)
ccTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGa > 2:1363168/1‑100 (MQ=255)
ccTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGa > 2:1178149/1‑100 (MQ=255)
ccTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGa > 1:989309/1‑100 (MQ=255)
catAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGa > 2:1978381/3‑100 (MQ=255)
tAAACACCTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATc < 1:2294075/100‑1 (MQ=255)
aacaacTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCg > 1:210726/1‑100 (MQ=255)
acaacTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCgg < 2:1668727/100‑1 (MQ=255)
acaacTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCgg < 1:1061320/100‑1 (MQ=255)
acaacTCCAGGATTGCGCGACTCTGTGTTGTGAAACCTAATATAAAAAAAAAAAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCgg < 1:2326447/100‑1 (MQ=255)
caacTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGt < 1:888492/100‑1 (MQ=255)
aacTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACACACCTGGCGCTGGTACGGCCCAAACGATcc > 1:2482336/1‑96 (MQ=255)
acTCCAGGGTTCCGCGTCTCTTTGCTGTGAAAACCACGATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGttt > 1:801937/1‑100 (MQ=255)
cTCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTc > 1:346706/1‑100 (MQ=255)
cTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTc > 1:362678/1‑100 (MQ=255)
cTCCAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTc > 2:2614438/1‑100 (MQ=255)
tCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCt < 1:2819379/100‑1 (MQ=255)
cAGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCttt > 2:791525/1‑100 (MQ=255)
aGGGTTCCGCGTCTCTTTGCTGTGAAACCCACTAAGAAAAAAAAAAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCt < 1:199578/97‑1 (MQ=255)
ggTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGc > 1:51536/1‑100 (MQ=255)
ggTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGACGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGGTTCTTTAGc < 2:807216/100‑1 (MQ=255)
gTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCt < 2:1779028/100‑1 (MQ=255)
gTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGc < 1:581255/99‑1 (MQ=255)
gTTCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCt > 1:14227/1‑100 (MQ=255)
tCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGa > 2:2072909/1‑100 (MQ=255)
tCCGCGTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGa < 2:2466588/100‑1 (MQ=255)
cgcgTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATg > 2:2514580/1‑100 (MQ=255)
cgcgTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGNAACANACNTGNCNCNGNTNCNGCCCAAACGATCCGGTTTCTTTAGCTGAtn < 2:1418065/100‑2 (MQ=255)
cgcgTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATg > 1:746944/1‑100 (MQ=255)
cgcgTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATg > 2:1188569/1‑100 (MQ=255)
cgcgTCTCTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCAAAAACGATCCGGTTTCTTTACatgatg > 1:2757908/1‑100 (MQ=255)
tctcTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCg < 1:2725753/100‑1 (MQ=255)
tctcTTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCg < 1:1794566/100‑1 (MQ=255)
ctctTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGt < 2:415578/100‑1 (MQ=255)
tctTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTc < 1:2023338/100‑1 (MQ=255)
ctTTGCTGTGAAACCCACTATGTGAAAGAGGCAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGTTCCGGTTTCTTTAGCTGATGTCCGTCa > 1:235239/1‑100 (MQ=255)
ctTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTCa > 2:56659/1‑100 (MQ=255)
ctTTGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTCa < 1:1754852/100‑1 (MQ=255)
tttGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTCAg > 2:2568229/1‑100 (MQ=255)
ttGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTCAgg > 2:2181482/1‑100 (MQ=255)
ttGCTGTGAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTCAgg < 1:1794034/100‑1 (MQ=255)
tgtgAAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTCAggcggg < 1:935854/100‑1 (MQ=255)
|
TTATACGCCATCTCATCCGATGCAACGCCACGGCTGCGGTCTGGTTGTTCATCCGGATACCTAAACAACTCCAGGGTTCCGCGTCTCTTTGCTGTGGAACCCACTATGTGAAAGAGGAAAAATCATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTCAGGCGGG > NC_000913/4551512‑4551703
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
