Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F255 I1 R1
|
77 |
120.7 |
6116409 |
93.2% |
5700493 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,951,559 |
+A |
pseudogene (18/663 nt) |
ilvG → |
pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,951,559 | 1 | . | A | 100.0%
| 503.5
/ NA
| 142 | pseudogene (18/663 nt) | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (82/60); total (82/60) |
Only 100 of 153 total aligned reads displayed.
AACAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAA > NC_000913/3951460‑3951652
|
aaCAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTgc > 2:2738629/1‑100 (MQ=255)
cAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTgcag < 1:1942106/100‑3 (MQ=255)
cAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTgcag > 2:1496511/1‑98 (MQ=255)
cAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTgcag > 2:1496084/1‑98 (MQ=255)
aGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTgcagcg > 1:660874/1‑96 (MQ=255)
aGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTgcagcg > 2:684386/1‑96 (MQ=255)
tGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAg < 1:681374/100‑1 (MQ=255)
gCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTgcagcgcagc < 1:1758068/100‑1 (MQ=255)
gTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTgcagctgcgctg < 1:2193149/100‑11 (MQ=255)
gTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTg > 2:900848/1‑100 (MQ=255)
ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtg > 1:1002497/1‑100 (MQ=255)
ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtg < 2:1957345/100‑1 (MQ=255)
ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtg < 2:2543561/100‑1 (MQ=255)
ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtg < 2:292136/100‑1 (MQ=255)
gCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtga < 2:2463883/100‑1 (MQ=255)
cacaTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtgat > 1:815407/1‑100 (MQ=255)
acaTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtgatg > 1:1419778/1‑100 (MQ=255)
acaTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtgatg > 1:596232/1‑100 (MQ=255)
caTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtgatga < 1:2438277/100‑1 (MQ=255)
caTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtgatga > 2:1100715/1‑100 (MQ=255)
tgtgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAAc > 1:679825/1‑100 (MQ=255)
tgtgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAAc > 2:2910892/1‑100 (MQ=255)
tgtgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCACAGCTGCGTGATGAAc < 2:1055332/100‑1 (MQ=255)
gtgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGtgatga < 1:1211914/97‑1 (MQ=255)
gtgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACa > 1:2801762/1‑100 (MQ=255)
ggCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACAtt > 1:2426085/1‑100 (MQ=255)
gCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTc > 1:356549/1‑100 (MQ=255)
cATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTcc < 1:1197482/100‑1 (MQ=255)
ttACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTg < 1:2804039/100‑1 (MQ=255)
ttACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTAGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTg < 2:47007/100‑1 (MQ=255)
aCAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGc > 2:161835/1‑100 (MQ=255)
aCAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGc > 2:590243/1‑100 (MQ=255)
cAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCg < 1:2615508/100‑1 (MQ=255)
aaGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCg < 1:2206600/99‑1 (MQ=255)
gTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTAc < 1:831585/100‑1 (MQ=255)
gATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGa > 1:728379/1‑100 (MQ=255)
aTTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGAc < 2:869714/100‑1 (MQ=255)
tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGAcc > 1:1355151/1‑100 (MQ=255)
tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGAcc < 1:1292173/100‑1 (MQ=255)
tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGAcc > 2:2577927/1‑100 (MQ=255)
tAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCAt > 1:1989539/1‑100 (MQ=255)
tAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCAt > 1:1718163/1‑100 (MQ=255)
gCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCgt < 1:1369924/100‑2 (MQ=255)
gCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCgg > 2:1649041/1‑100 (MQ=255)
gCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCgg < 1:2155900/100‑1 (MQ=255)
ctctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGt > 2:2795605/1‑100 (MQ=255)
ctctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGt > 1:2854710/1‑100 (MQ=255)
ctctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGt < 1:143579/100‑1 (MQ=255)
tctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTg < 1:2650929/100‑1 (MQ=255)
ctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGa > 2:1426322/1‑100 (MQ=255)
ctGTTAACAGCATTACAGCAGCCGTTAAATCAAGGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCgg < 2:1126548/97‑1 (MQ=255)
gTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACg > 1:937880/1‑100 (MQ=255)
gTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACg > 1:279683/1‑100 (MQ=255)
gTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACg > 2:1964408/1‑100 (MQ=255)
tACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCt > 2:73710/1‑100 (MQ=255)
aCCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGATCATTCCTGGCGTTACGACCATCCCGGTGACGCTa > 2:1617372/1‑100 (MQ=255)
ccAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGCTACGACCATCCCGGTGACGCTAt > 2:2877745/1‑100 (MQ=255)
cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATc < 2:308601/100‑1 (MQ=255)
cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATc > 1:742738/1‑100 (MQ=255)
cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATc > 1:3029810/1‑100 (MQ=255)
gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTa < 1:1304144/100‑1 (MQ=255)
gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTa > 1:629773/1‑100 (MQ=255)
aTTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg > 2:1218916/1‑100 (MQ=255)
aTTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg > 2:3043879/1‑100 (MQ=255)
aTTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg > 2:2004081/1‑100 (MQ=255)
tACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcgcg < 1:2125186/100‑1 (MQ=255)
aCAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACgcgc > 2:1065286/1‑100 (MQ=255)
agcagcCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCg > 1:2904038/1‑100 (MQ=255)
gcagcCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgt > 2:2838936/1‑100 (MQ=255)
cagcCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgtt > 1:2381836/1‑100 (MQ=255)
cagcCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgtt > 2:558192/1‑100 (MQ=255)
agcCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttg > 2:221709/1‑100 (MQ=255)
gcCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgt > 1:1817652/1‑100 (MQ=255)
cGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttg < 1:1617391/100‑1 (MQ=255)
gTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttgt > 2:2275877/1‑100 (MQ=255)
gTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttgt < 2:2878917/100‑1 (MQ=255)
tAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTa > 2:2863511/1‑100 (MQ=255)
aaTCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa‑a > 2:2300363/1‑100 (MQ=255)
aTCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa‑aa > 1:505695/1‑100 (MQ=255)
aTCAATGACTGGCAGCAACACTGCAGCGCAGCCGCGTGACGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa‑aa < 2:2145449/100‑1 (MQ=255)
tCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aac < 2:1129117/100‑1 (MQ=255)
tCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aac > 1:2449040/1‑100 (MQ=255)
cAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aaca > 2:1803895/1‑100 (MQ=255)
cAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGATGACGCTATCTACGCGCCGTCGTTGTTAA‑aac < 2:2478233/99‑1 (MQ=255)
gACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTg < 2:1718143/100‑1 (MQ=255)
aCTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATCCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTT‑TTaacaacaacggc < 2:450755/100‑4 (MQ=255)
cTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTT‑TTaacaacaacggcg < 1:2108616/100‑5 (MQ=255)
tGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCg < 1:101824/100‑1 (MQ=255)
tGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCg < 1:2841567/100‑1 (MQ=255)
tGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTT‑TTaacaacaacggcg < 2:1002486/99‑5 (MQ=255)
ggCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCgg > 1:2713358/1‑100 (MQ=255)
gcagcaACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGa < 1:2744892/100‑1 (MQ=255)
gcaACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCg < 2:1094616/100‑1 (MQ=255)
gcaACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCg > 1:2435226/1‑100 (MQ=255)
caACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGt < 1:3043922/100‑1 (MQ=255)
caACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGt > 2:665310/1‑100 (MQ=255)
acacTGCAGCGCAGCTGCGTGGTGAACATTCCTGGCGTTACGACCCTCCCGCTCACGCTCTCTCCGCGCCGTTGTTGTTAA‑AACCACTGTCGGATCg > 2:2731903/1‑97 (MQ=255)
acacTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTaa < 2:1989515/100‑1 (MQ=255)
acacTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTaa < 1:879560/100‑1 (MQ=255)
cacTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTaaa > 1:1605193/1‑100 (MQ=255)
|
AACAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAA > NC_000913/3951460‑3951652
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
