Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F258 I0 R1
|
432 |
103.0 |
5191697 |
92.7% |
4812703 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,952,380 |
G→A |
100% |
L60L (CTG→CTA) |
ilvM → |
acetolactate synthase 2 small subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,952,380 | 0 | G | A | 96.9%
| 296.1
/ ‑0.1
| 95 | L60L (CTG→CTA) | ilvM | acetolactate synthase 2 small subunit |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base A (38/54); total (39/56) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.17e-01 |
TTTCCACGTCTGCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTGTTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGAGCGCAAAAGGAA > NC_000913/3952284‑3952476
|
tttCCACGTCTGGACAATGAATATGGCCGCTGCCAGCGATGCACAAACTATAGATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTAttt < 1:707844/100‑1 (MQ=255)
tCCACGTCTGCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAg < 2:1254985/100‑1 (MQ=255)
ccACGTCTGCTCAATAAATATGGCCACCGCCTGCGATGCACAAAATATAAATATCGAATTGACCGTGGCCAGCACACGGTCGGTCGACTTACTATTTAg < 1:1373799/99‑1 (MQ=255)
aCGTCTGCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCa < 2:306334/100‑1 (MQ=255)
aCGTCTGCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCa < 1:1969394/100‑1 (MQ=255)
cGTCTGCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAg > 1:338744/1‑100 (MQ=255)
tCTGCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGtt > 2:2016053/1‑100 (MQ=255)
atcttCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTta < 1:400081/96‑1 (MQ=255)
gCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTtaaa < 2:1346294/100‑1 (MQ=255)
gCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTtaaa > 1:2138460/1‑100 (MQ=255)
cTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTtaaat < 2:525080/100‑1 (MQ=255)
tCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTtaagat > 2:400083/1‑97 (MQ=255)
aTGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAAc < 2:2001509/100‑1 (MQ=255)
tGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACt < 1:1426876/100‑1 (MQ=255)
tGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACt > 2:2533614/1‑100 (MQ=255)
aaTATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACtgg < 2:2022064/100‑1 (MQ=255)
atatGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACtggt > 1:733604/1‑100 (MQ=255)
tatGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACtggtg > 2:1316188/1‑100 (MQ=255)
tatGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACtggtg < 1:2016041/100‑1 (MQ=255)
atGGCTGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTGGCCAGTGCATGGTCGGTCTACTTACTATTTATTCAGTTAAATAAGTtggtgg < 1:2056427/100‑1 (MQ=255)
atGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACgtgtgg < 1:635640/100‑1 (MQ=255)
tGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTGTTTAGTCAGTTAAATAAACTGGTGGa < 1:1692577/100‑1 (MQ=255)
gccgccgccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACg > 1:599951/1‑100 (MQ=255)
gccgccgccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACg > 1:820072/1‑100 (MQ=255)
cgccgccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTc < 1:442221/100‑1 (MQ=255)
cgccgccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTc < 2:338674/100‑1 (MQ=255)
ccgccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGc < 1:594732/100‑1 (MQ=255)
ccgccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGc < 2:777011/100‑1 (MQ=255)
ccgccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGc < 1:1910790/100‑1 (MQ=255)
ccgccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGc < 1:1476038/100‑1 (MQ=255)
cgccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTGTTTAGTCAGTTAAATAAACTGGTGGACGTCGca < 2:150571/100‑1 (MQ=255)
gccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGcac < 2:2046048/100‑1 (MQ=255)
gccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGcac < 2:2410067/100‑1 (MQ=255)
ccAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGcaca < 2:1845145/100‑1 (MQ=255)
gCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGt > 1:1717893/1‑100 (MQ=255)
cGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGtt < 2:1516829/100‑1 (MQ=255)
gATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTg < 1:550504/100‑1 (MQ=255)
aTGCACAAAATATAACTATCGAATTGACCGTTGCCATCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAACTAAACTGGTGGACGTCGCACACGTTGc < 1:644339/100‑1 (MQ=255)
aTGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGc < 1:1295323/100‑1 (MQ=255)
tGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGcc < 1:1059593/100‑1 (MQ=255)
cacaAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCAt > 1:409662/1‑100 (MQ=255)
cacaAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCAt > 1:896131/1‑100 (MQ=255)
cacaAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCAt > 2:355499/1‑100 (MQ=255)
cacaAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATCTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCa > 1:2537330/1‑99 (MQ=255)
acaAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATc < 1:96248/100‑1 (MQ=255)
aatataaatatCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGcc < 2:1849935/100‑1 (MQ=255)
aatataaatatCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGcc < 1:178285/100‑1 (MQ=255)
tataaatatCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCag < 2:131212/100‑1 (MQ=255)
tataaatatCGAATTGACCGTTACCAGCACACGGTCGGTCGACTTACTATCTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCAGCTGCAag < 1:2028199/100‑1 (MQ=255)
ataaatatCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCaga > 2:795449/1‑100 (MQ=255)
taaatctCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCag > 1:1032085/1‑98 (MQ=255)
taaatatCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCagag < 1:275180/100‑1 (MQ=255)
atatCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGcac > 2:846508/1‑100 (MQ=255)
atCGAATTGACCGTTGCCAGCCCATGGTCGGGCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACaa < 1:206188/100‑1 (MQ=255)
atCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTCAGATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACaa > 1:4401/1‑100 (MQ=255)
tCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCCGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAAc > 1:1285383/1‑100 (MQ=255)
cGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCaccacc > 1:2393859/1‑100 (MQ=255)
cGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAAcc > 2:2118157/1‑100 (MQ=255)
gAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACca < 1:2317044/100‑1 (MQ=255)
gAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTCAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAAcc > 1:104017/1‑99 (MQ=255)
gAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATGTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACca < 1:2205790/100‑1 (MQ=255)
aaTTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACcac < 1:1301206/100‑1 (MQ=255)
gACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATca > 2:2266722/1‑100 (MQ=255)
gACCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATca > 2:2201134/1‑100 (MQ=255)
aCCGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATcac < 1:1916822/100‑1 (MQ=255)
ccGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATcaca > 2:29250/1‑100 (MQ=255)
ccGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATcaca > 1:226830/1‑100 (MQ=255)
cGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATcac < 1:439580/98‑1 (MQ=255)
cGTTGCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCacaa < 2:1389092/100‑1 (MQ=255)
gTTGCCAGCCCACTGTCGGTCGACTTACGAGTTAGTCAGTTAAAAAAACTGGTGGACGTCGTACACGTTGCCATATGCCAGAGCACAACGAAATCataac < 1:357076/100‑1 (MQ=255)
tGCCAACCCACGGTCGGTCAACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGCCGCACACGTTGCCATCTGCCAGAGCACAACCACATCacaac < 2:386260/98‑1 (MQ=255)
gCCAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACaaa > 2:2147030/1‑100 (MQ=255)
ccAGCCCACTGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAAt > 2:1644958/1‑100 (MQ=255)
ccAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACaaa < 1:395747/99‑1 (MQ=255)
cAGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATc < 2:451282/100‑1 (MQ=255)
aGCCCACGGTCGGTCGACTTACTGTTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATcc > 2:2406042/1‑100 (MQ=255)
aGCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATcc < 1:44840/100‑1 (MQ=255)
ggcaaCGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCcg < 2:1472867/96‑1 (MQ=255)
gCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCcg > 2:1209657/1‑100 (MQ=255)
gCCCACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCcg > 1:446166/1‑100 (MQ=255)
cccACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCcgc > 2:2394071/1‑100 (MQ=255)
cccACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCcgc > 1:2101908/1‑100 (MQ=255)
cACGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCgcgc < 2:226832/100‑1 (MQ=255)
aCGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGcc < 1:959136/100‑1 (MQ=255)
aCGGTCGGTCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGcc < 1:1214666/100‑1 (MQ=255)
cggtcggtCGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCt > 2:690505/1‑100 (MQ=255)
ggtcggtcGACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTg < 2:1774987/100‑1 (MQ=255)
tcggtcgACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGAg < 1:795446/100‑1 (MQ=255)
tcggtcgACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGAg < 1:39009/100‑1 (MQ=255)
cggtcgACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGAgc > 2:1494581/1‑100 (MQ=255)
ggtcgACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGAgcg > 1:967231/1‑100 (MQ=255)
ggtcgACTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGAgcg > 2:1153254/1‑100 (MQ=255)
cTTACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGAGCGCAAAAg < 1:340479/100‑1 (MQ=255)
tACTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGAGCGCAAAAGGa > 1:2263945/1‑100 (MQ=255)
aCTATTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGAGCGCAAAAGGaa > 2:1190015/1‑100 (MQ=255)
|
TTTCCACGTCTGCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTGTTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGAGCGCAAAAGGAA > NC_000913/3952284‑3952476
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
