Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F255 I0 R1
|
121 |
91.8 |
4500463 |
95.1% |
4279940 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,601,076 |
T→C |
29.1% |
A337A (GCA→GCG) |
ftsX ← |
putative ABC transporter permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,601,076 | 0 | T | C | 29.1%
| 130.2
/ 77.1
| 104 | A337A (GCA→GCG) | ftsX | putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (35/38); new base C (15/15); total (51/53) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.01e-01 |
Only 100 of 106 total aligned reads displayed.
CTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAACCTGTGCCACT > NC_000913/3600978‑3601175
|
ctttccctgcaatgggttccgtagcagggaaagagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTg > 1:1121554‑M2/36‑100 (MQ=255)
CTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTg > 1:1472945‑M1/1‑100 (MQ=255)
CTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTg > 2:1396518‑M1/1‑100 (MQ=255)
tttccctgcaatgggttccgtagcagggaaagagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGc > 1:1057785‑M2/35‑100 (MQ=255)
tttccctgcaatgggttccgtagcagggaaagagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGc > 1:1057754‑M2/35‑100 (MQ=255)
TTTCCCTGCTACGTAACTCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTg > 1:300132‑M1/1‑99 (MQ=255)
TTTCCCTGCTACGGAACCCATTGAAGGGAAAGAGTATAACACGATTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTTGCAAGCCACACTGc < 2:2051979‑M1/100‑1 (MQ=255)
ttccctgcaatgggttccgtagcagggaaagagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGcc > 1:2015628‑M2/34‑100 (MQ=255)
ttccctgcaatgggttccgtagcagggaaagagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGcc > 1:1677245‑M2/34‑100 (MQ=255)
ttccctgcaatgggttccgtagcagggaaagagTATAACACACTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGcc > 2:1222402‑M2/34‑100 (MQ=255)
TTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGcc < 1:1824673‑M1/100‑1 (MQ=255)
tccctgcaatgggttacgtagcagggaaagagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCa > 2:952972‑M2/33‑100 (MQ=255)
CCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCAc > 2:79514‑M1/1‑100 (MQ=255)
CCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCAc > 1:81976‑M1/1‑100 (MQ=255)
CCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCAcc > 1:2063905‑M1/1‑100 (MQ=255)
GCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAg < 1:933572‑M1/100‑1 (MQ=255)
GCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAg > 1:441901‑M1/1‑100 (MQ=255)
GCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAg < 2:260733‑M1/100‑1 (MQ=255)
CTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGc > 2:882363‑M1/1‑100 (MQ=255)
tACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGcc < 1:866626/100‑1 (MQ=255)
tACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGcc > 2:95647/1‑100 (MQ=255)
aCGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCa > 1:780987/1‑100 (MQ=255)
cGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCaa < 2:133640/100‑1 (MQ=255)
gAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAatc > 2:1645855/1‑100 (MQ=255)
gAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAatc > 2:1565545/1‑100 (MQ=255)
aaCCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAatca < 1:643187/100‑1 (MQ=255)
ncccATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAatcat > 1:929656/2‑100 (MQ=255)
cccATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAatcatc < 1:1673533/100‑1 (MQ=255)
aTTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAg < 2:2187272/100‑1 (MQ=255)
aTTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAg < 2:619905/100‑1 (MQ=255)
aTTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAg > 2:821621/1‑100 (MQ=255)
ttGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGc < 1:1878147/100‑1 (MQ=255)
ttGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGc < 2:1591884/100‑1 (MQ=255)
cagggaaagagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACTGTGGCAAGCCACGCCGCCAACCAGCCAATCATCGAGCATa > 2:1582747‑M2/12‑100 (MQ=255)
gggaaagagTATAACACGCTTTTATTCTTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATAcc > 1:1362012‑M2/10‑100 (MQ=255)
gggaaagagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATAcc > 2:2225502‑M2/10‑100 (MQ=255)
gggaaagagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATAcc < 1:2031066‑M2/91‑1 (MQ=255)
agagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACcagcag > 2:429941‑M2/5‑100 (MQ=255)
agagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACcagcag > 1:1602814‑M2/5‑100 (MQ=255)
gagTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCagcagc < 1:1449613‑M2/97‑1 (MQ=255)
tataACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAAt < 2:1938715/100‑1 (MQ=255)
ataACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATa > 1:2220534/1‑100 (MQ=255)
taACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAg < 1:334467/100‑1 (MQ=255)
taACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAAAGTTGTACCGTGCCCAGCCCCGCTGCCACCCAGCCAATCATCGAGCATACAAGCAGCAAtcg < 2:661278/100‑3 (MQ=255)
acacGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCa > 2:2149765/1‑100 (MQ=255)
cacGCTTTTATTATTCAGGCGTAAAGTGGCTTAAAGGTTTAACCGTGGCAAGCCACGCCGCCACGCTGCCAATCATCTAGCATTCCAGCAGCAATAGc < 2:1641800/98‑1 (MQ=255)
cGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGc < 2:106867/100‑1 (MQ=255)
ttttATTATTCAGGCGTAAAGTGACGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGGATACCAACAGCAATAGCAGGCa > 2:1415410/1‑98 (MQ=255)
tttATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTc > 2:2194185/1‑100 (MQ=255)
ttattaTTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCa < 1:1141862/100‑1 (MQ=255)
tattatTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCAt > 2:2222042/1‑100 (MQ=255)
tattCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGa < 2:840298/100‑1 (MQ=255)
attCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGaa < 2:49292/100‑1 (MQ=255)
ttCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAAt > 1:1190887/1‑100 (MQ=255)
ttCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAAt < 2:2089126/100‑1 (MQ=255)
ttCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAAt < 2:1495948/100‑1 (MQ=255)
ttCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAAt < 1:2177865/100‑1 (MQ=255)
tCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATg < 1:1625385/100‑1 (MQ=255)
tCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATg < 2:1483076/100‑1 (MQ=255)
tCAGGCATAGAGTGGCGTAAATGTTGGGCCGTTGCAAGCCACGCTGCTCTCCAGCCAATCATCGAGCATACCAGCTGCAATATCAGGCATTCATCGAATg < 2:1481142/100‑1 (MQ=255)
ggCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATa > 1:1626585/1‑100 (MQ=255)
ggCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATa < 1:1214601/100‑1 (MQ=255)
ggCGTAAAGTGGCGTAAATGTTGTACAGTGGCAAGCAACGCGGCCACACAGCCAATCATCGAGCATACCCGCAGCAATAGCAGGCATTCATCgca > 2:2207676/1‑93 (MQ=255)
cGTAAAGTGGCGT‑AATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGc < 2:2126232/100‑1 (MQ=255)
gTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGc < 1:2225517/100‑1 (MQ=255)
aGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCAtt < 1:926368/100‑1 (MQ=255)
tGGCGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAACCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGa < 1:1872530/100‑1 (MQ=255)
ggCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGat > 2:729741/1‑100 (MQ=255)
gCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACGCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGata < 2:447355/100‑1 (MQ=255)
gCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGata > 2:1105325/1‑100 (MQ=255)
gCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGata < 1:548042/100‑1 (MQ=255)
cGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGatat < 1:2236351/100‑1 (MQ=255)
cGTAAATGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGatat > 1:1719532/1‑100 (MQ=255)
gTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATc > 1:1138873/1‑100 (MQ=255)
tAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCa < 2:1677234/100‑1 (MQ=255)
aaaTGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCaa < 1:95647/100‑1 (MQ=255)
aaaTGTTGTACCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCaa > 2:64801/1‑100 (MQ=255)
aTGTTGTACCGTGGCAAGCCACGCTGCCCCCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAAc < 2:214657/100‑1 (MQ=255)
tgttgtACCGTGGCAAGTCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACt > 2:543783/1‑100 (MQ=255)
gttgtACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACtt > 2:811536/1‑100 (MQ=255)
gtACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGt < 1:1972308/100‑1 (MQ=255)
gtACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGt > 1:1331872/1‑100 (MQ=255)
caCCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGtt > 2:1890899/2‑100 (MQ=255)
aCCGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTc > 1:1803606/1‑96 (MQ=255)
ccGTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTcc < 1:589014/100‑1 (MQ=255)
gTGGCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGa > 1:2217523/1‑100 (MQ=255)
tggcttgCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGaa > 1:1701240/7‑100 (MQ=255)
gCAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGaaaa > 2:1641802/1‑100 (MQ=255)
cAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAAc < 1:1864313/100‑1 (MQ=255)
cAAGCCACGCCGCGACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAAc > 2:1387624/1‑100 (MQ=255)
cAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCATCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAAc < 2:950721/100‑1 (MQ=255)
cAAGCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAAc < 1:429293/100‑1 (MQ=255)
gcgaCGCTGCCACCGAGCCAATCATCGAGCATACCACCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAAcc < 2:922440/95‑1 (MQ=255)
gCCACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAACCt > 1:869816/1‑99 (MQ=255)
cACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAACCtgtg < 2:2015614/100‑1 (MQ=255)
cACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAACCtgtg < 2:949061/100‑1 (MQ=255)
cACGCCGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAACCtgtg > 1:2190512/1‑100 (MQ=255)
cGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAACCTGTGcc < 1:416606/100‑1 (MQ=255)
cTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAACCTGTGCCAc < 1:1645866/100‑1 (MQ=255)
tGCCACCCCGCCAATCATCGAGCATACAAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATCGATATAAAACTTCGATCCGAAAACCTGTGCCACt > 2:92577/1‑100 (MQ=255)
|
CTTTCCCTGCTACGGAACCCATTGCAGGGAAAGAGTATAACACGCTTTTATTATTCAGGCGTAAAGTGGCGTAAATGTTGTACCGTGGCAAGCCACGCTGCCACCCAGCCAATCATCGAGCATACCAGCAGCAATAGCAGGCATTCATCGAATGATAAGCCATTGATATCAAACTTCGTTCCGAAAACCTGTGCCACT > NC_000913/3600978‑3601175
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
