Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F256 I1 R1
|
186 |
136.5 |
6958264 |
92.1% |
6408561 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC |
NC_000913 |
4,370,611 |
Δ5 bp |
intergenic (‑199/‑73) |
yjeH ← / → groS |
putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 4370610 | 5 (0.040) | 131 (0.980) |
88/194 |
0.2 |
96.4% |
intergenic (‑198/‑78) |
yjeH/groS |
putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| ? | NC_000913 |
4370616 = |
5 (0.040) | intergenic (‑204/‑72) |
yjeH/groS |
putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
Only 100 of 136 total aligned reads displayed.
ATGAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4370510‑4370610
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGC > NC_000913/4370616‑4370714
GAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCA < 1:2885521/100‑1
AAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTC > 2:1679083/1‑98
AATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACC < 2:232531/100‑1
ATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCA < 2:420298/100‑1
ATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACC < 1:1662352/99‑1
TGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCA > 1:2947731/1‑99
GTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGC > 1:2659284/1‑100
AGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGG > 1:2996926/1‑100
GGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGG > 1:2326755/1‑100
GGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGG < 1:2079623/100‑1
TGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAA > 1:1102964/1‑100
GAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAA > 2:2379398/1‑100
nATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCATCCTGCCCATTTCTCCCCAGCCGGGAAA > 1:1687423/2‑99
AATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAAC < 2:3165031/100‑1
AATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAAC > 1:355109/1‑100
TCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCA > 1:1218227/1‑100
AGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACG < 2:1143730/100‑1
AGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACG > 2:1628116/1‑100
AGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATACCCATTTCTCACCAGCCGGGAAACCACG < 2:1241218/100‑1
GGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTA > 1:1876451/1‑100
TTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAG < 1:3441699/100‑1
CACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCC > 2:1171994/1‑100
CACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCC < 2:2947778/100‑1
CCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGG > 2:2966688/1‑100
CGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCG > 2:34696/1‑100
GATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGT < 1:619963/100‑1
TTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACC < 1:2011599/100‑1
TTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACC < 1:1121879/100‑1
TGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGTGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACC > 2:2985477/1‑99
TGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCC > 2:657296/1‑100
TGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCC < 2:2996975/100‑1
TGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCC < 2:3383208/100‑1
TGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAATCTCCGGCGTCACCCAT > 2:3404233/1‑100
GCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATA < 1:3251843/100‑1
GCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATA < 2:562313/100‑1
GCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATA < 1:3136733/100‑1
CTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAA > 2:1414460/1‑100
GATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACA > 2:2613204/1‑100
GATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAAC < 1:1267068/99‑1
GATCAGAATTTTTTTTCTCTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACA < 1:3029051/100‑1
CAGAATTTTTTTTCTTTTTCCCCCTTGCAGGGCCGAAGCCTCATCCCCACTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAAC < 1:2922442/96‑1
GAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATAC < 2:2565033/100‑1
GAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATAC > 2:1251168/1‑100
AATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACG < 1:1000902/100‑1
TTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGAC < 2:322978/100‑1
TTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACT > 2:388396/1‑100
TTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTT > 1:3345252/1‑100
TTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTC < 1:3217/100‑1
TTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTC > 1:10689/1‑100
TTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCT > 2:2283918/1‑100
TTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCT > 1:1751157/1‑100
gcttcgCCCCTTCAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAA > 1:2770102/7‑100
TTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAA < 1:256564/100‑1
TTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAA < 1:1574604/100‑1
TTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAG < 1:1836800/100‑1
TTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAG < 1:2120612/100‑1
TTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGG > 1:3082889/1‑100
TTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGG > 1:3082239/1‑100
TCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGA > 2:2067556/1‑100
TCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGG > 2:1233525/1‑99
CCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAG > 1:1379357/1‑100
CCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAG < 1:1679060/100‑1
CCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAG < 1:1553833/100‑1
CCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGT < 2:720545/100‑1
CCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGT > 2:2678868/1‑100
TTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTA < 1:1149419/100‑1
TTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTA < 2:3066193/100‑1
TGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAT > 2:2968524/1‑100
TGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAT > 2:2043352/1‑100
TGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAT > 2:3103905/1‑100
GAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATC < 1:1041149/100‑1
GAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATC > 1:1399006/1‑100
AAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCA > 1:2498980/1‑100
AGGGGCGAAGCATCATCCCCATCTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAA > 2:3091367/1‑100
cttccgatctCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAAT < 1:3277700/90‑1
GGGGCGAAGCCTCATCCCCATTTCTCACCAGCCTGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAA > 1:2249886/1‑99
GGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAAT > 1:1278306/1‑100
GGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATG > 1:1391674/1‑100
GGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGA > 2:2853356/1‑100
CGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAAT < 1:2050991/100‑1
GAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATA < 2:2764135/100‑1
GCCTCATCCCCCTTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAATGAGAGTTATCAATGAATATT < 1:2123631/99‑1
GCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTC > 2:1083132/1‑100
GCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTC > 2:543035/1‑100
CCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCG < 1:2413504/100‑1
CTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATagatcggaag > 2:3277751/1‑90
CTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGT > 2:686429/1‑100
CATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGNTCCGGCGTCACCCATAACAGNTACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCC < 2:869506/100‑1
CATCCCCATTTATCACCAGCCGGGAACCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTC < 1:393148/99‑1
TCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCA < 2:3351282/99‑1
CCCCATTTCTCACCAGCCTGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATT < 2:1641634/100‑1
CCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTG > 2:1442836/1‑100
CATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCA < 2:2244717/100‑1
TTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATG < 2:1330517/100‑1
TCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGAT > 2:2335146/1‑100
CTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATC > 2:2196343/1‑100
CTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATC < 1:2180534/100‑1
TCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCG < 1:2913698/100‑1
TCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCG < 2:871404/100‑1
CACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGC > 2:313042/1‑100
ATGAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4370510‑4370610
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGC > NC_000913/4370616‑4370714
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
