Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| JC |
NC_000913 |
4,370,611 |
Δ5 bp |
100% |
intergenic (‑199/‑73) |
yjeH ← / → groS |
putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 4370610 | 8 (0.070) | 113 (1.070) |
76/174 |
NT |
93.5% |
intergenic (‑198/‑78) |
yjeH/groS |
putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| ? | NC_000913 |
4370616 = |
8 (0.080) | intergenic (‑204/‑72) |
yjeH/groS |
putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
Only 100 of 126 total aligned reads displayed.
TGAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4370511‑4370610
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGC > NC_000913/4370616‑4370714
TGAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTTTTTCTTTAAGGGGCAAAGCCTCATCCCCATTTCT > 1:999657/1‑99
AAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCAC > 2:2913317/1‑100
AATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACC < 2:1556769/100‑1
AATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACC < 1:2261344/100‑1
ATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTTCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCAC < 1:1020472/98‑1
ATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCA < 2:1928373/100‑1
TGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAG > 1:1612322/1‑100
GTGATGTGAATAAGGGTTTTCACCCGATTTTGTGTTTATCAGAATTTTTTTACGTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAG < 1:1312945/99‑1
atGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGG < 2:2083601/98‑1
GGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGG > 2:1927800/1‑100
GGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGG < 1:2913349/100‑1
GGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGG > 1:1664701/1‑100
GAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCTCCTTTTCTCACCAGCCGGGAAA < 2:2921472/100‑1
AATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAAC < 1:675684/100‑1
ATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACC > 1:1844030/1‑100
ATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACC < 2:2259031/100‑1
ATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACC > 1:1597145/1‑100
CAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATACCCATTTCTCACCAGCCGGGAAACaa > 1:895193/1‑97
AGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACG < 2:2085675/100‑1
AGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACG < 2:2086357/100‑1
GGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGT > 1:906772/1‑100
GGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCATCATCCCCATTTCTCACCAGCCGGGAAACCACG > 2:2562190/1‑99
TTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAG < 1:2006903/100‑1
TTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCCCGTAAGC > 2:1017468/1‑100
TTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGC < 1:2936909/100‑1
TTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGC < 1:2208184/100‑1
TCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTC > 2:902888/1‑100
CACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTTCCCTTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCC > 2:127451/1‑100
CCGATTTTGTGCTGATCAGAATTTTTTTTTTTTTTTTTCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCCGC > 2:2667683/1‑100
GATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCG < 1:2438817/99‑1
TTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAC < 1:2857579/100‑1
TTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACC < 1:2139221/100‑1
TTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACC < 2:1145287/100‑1
TGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCC < 2:2367467/100‑1
GTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCA > 1:1683922/1‑100
GATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACA < 2:906766/100‑1
ATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCATCATCCCCATTTCTCACCAGCCGCGAAACCACGTAAGCTCCGGCGTCACCCATAACAG > 2:724071/1‑100
CAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAACTACGACGTCACCCATAACAG > 1:1419915/1‑98
AGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCTAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGAT < 2:2563846/99‑1
AGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATA < 1:1806500/100‑1
AGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGAT < 1:403673/99‑1
GAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATAC > 1:1000069/1‑100
GAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATAC > 1:756617/1‑100
ATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGG < 2:291881/100‑1
ATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACG < 2:203898/99‑1
TTTTTTTCTTTTTCTCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGA > 2:1198932/1‑99
TTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGAC < 1:2629472/100‑1
TTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGAC < 2:2510282/100‑1
TCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTC < 2:78760/100‑1
TCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTC > 1:2084993/1‑100
CTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATATGGACTTTCTCA > 1:698714/1‑100
CTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCA > 1:788579/1‑100
CTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCA < 2:823588/100‑1
CTTTTTCCCCCTTGAAGGGGCGAAGAATCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTAACCCACAACAGATACGGACTTTacca > 2:1366340/1‑96
TTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAA < 1:2038526/100‑1
TTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAA < 2:1337840/100‑1
TTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAG < 1:1678321/100‑1
TTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAG < 1:127452/100‑1
CCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAG < 1:1932486/100‑1
CCCCTTGAAGGGGCTAAGCCTCATCCCCATTTCTCACCAGCCGGGAATCCACGTAAGCTCTGGCGTCACCCATATCATTTACGGACTTTCTCAAAGG < 2:2719739/97‑1
CCCCTTGAAGGGGCGAGGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGAGTAACAAATAACAGATACAGACTTTCTCAAAGGAG > 1:1066787/1‑99
CCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGA > 1:1572187/1‑100
CCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTACGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGA > 1:122124/1‑100
CCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAG < 1:2838120/100‑1
CCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAG < 1:276172/100‑1
CCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATATGGACTTTCTCAAAGGAGAGT < 2:698710/100‑1
CCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAG > 2:236108/1‑99
CTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTT < 2:1304846/100‑1
TTGAAGTGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACTGACTTTCTCAAAGGAGAGTTA < 2:684335/100‑1
TTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTA > 1:578907/1‑100
TTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTA < 2:606029/100‑1
GAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATC < 1:999215/100‑1
GAAGGGGCGAAGCCTCATCCCCAGTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATC > 2:1839394/1‑100
AAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCA < 2:805405/100‑1
AAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTACGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCA < 1:751150/100‑1
AGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAA > 2:1962888/1‑100
AGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAA > 2:2889786/1‑100
AGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGACGTCACCCATAACAGATACGGACTTTCTAAAAGGAGAGTTATCAA > 1:528211/1‑100
GGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATG < 1:2667715/100‑1
GGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAAT < 2:1269143/99‑1
GGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGA > 1:2679694/1‑100
GGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACAGACTTTCTCAAAGGAGAGTTATCAATGA > 1:856287/1‑100
GGCGAAGCCTCATCCCCATTTCTAACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAAT > 2:1496838/1‑98
GCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAA < 2:961840/100‑1
CGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAAT < 1:2189698/100‑1
GAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATA > 1:1187337/1‑100
GAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATA < 1:1623140/100‑1
AAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCACAAAGGAGAGTTATCAATTAATAT > 1:1232543/1‑100
AGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATT < 2:168048/100‑1
CCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCG < 2:2633715/100‑1
CTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGT > 1:1254460/1‑100
CATCCGCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTC < 2:2821039/99‑1
ATCCCCATTTCTCATCAGCCGGGAAACTACGTAAGTTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCA < 1:1068558/100‑1
TCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGAACATTCTCAAAGGAGAGTTATAAATGAATATTCGTC > 2:479514/1‑97
CCCATTTCTCACCAGCCGGTAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAACGGAGAGTTATCAATGAATATTCGTCCATTG > 2:2852984/1‑100
CCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTG < 2:1572692/100‑1
CCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGC < 1:162104/100‑1
CCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGC < 2:1353853/100‑1
TCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCG > 1:1827533/1‑100
CACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGC > 2:1218827/1‑100
TGAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4370511‑4370610
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGC > NC_000913/4370616‑4370714
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
