Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,420,727 |
G→A |
100% |
G36D (GGC→GAC) |
yfcG → |
GSH‑dependent disulfide bond oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,420,727 | 0 | G | A | 96.7%
| 280.4
/ ‑0.1
| 91 | G36D (GGC→GAC) | yfcG | GSH‑dependent disulfide bond oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base A (42/46); total (44/47) |
| Fisher's exact test for biased strand distribution p-value = 6.08e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.63e-01 |
TCTATTTCGCCCCGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGGCGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATGGCGGCGAACCGC > NC_000913/2420631‑2420819
|
tctATTTCGCCCCGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACgg < 2:250273/100‑1 (MQ=255)
tATTTCGCCCCGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTc > 2:620531/1‑100 (MQ=255)
aTTTCGCCCCGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCa < 1:2206693/100‑1 (MQ=255)
aTTTCGCCACGACACCCAATGGTAACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACgg < 2:275552/97‑1 (MQ=255)
cGCCCCGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGttt < 2:2832089/100‑1 (MQ=255)
ccccGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCg > 2:2468386/1‑100 (MQ=255)
ccccGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCg > 2:1337691/1‑100 (MQ=255)
cccGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGACCTGGATTATCGCTTGATTAAGATAGACCTGAGGAAAGACGATAAGTTTCg > 1:1111168/1‑99 (MQ=255)
ccGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTc > 2:1558917/1‑100 (MQ=255)
ccGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTc > 1:2746694/1‑100 (MQ=255)
ccGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTc < 2:456506/100‑1 (MQ=255)
gACACCCAATGGTCACAAAATTTCGCTGTTTTTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCg < 1:909945/100‑1 (MQ=255)
gACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCg < 1:19436/100‑1 (MQ=255)
acacCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCgg > 1:2502684/1‑100 (MQ=255)
acacCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCgg < 1:2228894/100‑1 (MQ=255)
cacCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGa > 2:2557307/1‑100 (MQ=255)
cacCCAATGATCACAAAATTACGCTTTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCgg < 2:2308769/99‑1 (MQ=255)
acCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGaa > 2:2238328/1‑100 (MQ=255)
cccAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAAt > 1:2801173/1‑100 (MQ=255)
cccAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGAGAAAAACGATCAGTTTCGTCCGGAAt > 1:2632534/1‑100 (MQ=255)
cAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAAtt > 1:107394/1‑99 (MQ=255)
aTGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAAttttt < 2:2090324/100‑1 (MQ=255)
ggTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTgc < 2:2859375/100‑1 (MQ=255)
ntCACAAACTTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTCGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAAGTTTTgc > 2:529913/2‑99 (MQ=255)
gTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTgcg < 1:1542878/100‑1 (MQ=255)
gTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTgcg < 2:1748046/100‑1 (MQ=255)
gTCACAAAATTACGCTGTTTCTAGAAGAAGCAGAGCTAGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTgcg > 2:1613519/1‑100 (MQ=255)
tCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTgcgc < 1:309111/100‑1 (MQ=255)
tCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTgcgc < 2:698903/100‑1 (MQ=255)
cacaAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCa > 2:2502165/1‑100 (MQ=255)
cacaAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCa > 2:3011282/1‑100 (MQ=255)
cacaAAATTACGCTGTTTCTAGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCa > 2:740283/1‑100 (MQ=255)
acaAAGTTACGCTGTTTCTCGAAGAAGCAGAGCTGGTTTATCGCTTGATTAAGTTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTgc < 2:2479711/96‑1 (MQ=255)
acaAAATTACGCTGTTTCAAGAAGAAGCAGAGCTGGATAATCGCTTGATTAAGGTAAACCTGGGGAAAGACGATCAGTTTCGTCCGGAATTTTTGCGCAt > 2:64005/1‑100 (MQ=255)
aaTTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTCAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCg > 2:920735/1‑100 (MQ=255)
ttACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGcc < 2:470567/100‑1 (MQ=255)
ttACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGcc < 1:1256969/100‑1 (MQ=255)
aCGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCca < 2:2247436/100‑1 (MQ=255)
cGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCcaa > 2:2770032/1‑100 (MQ=255)
cGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCcaa > 1:1928213/1‑100 (MQ=255)
gTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCcaacaac < 1:661841/100‑1 (MQ=255)
gTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAAACGTTCAATTTCGTCCAAAATATTTGAGCATTTCgacaaaaaa > 1:343635/1‑91 (MQ=255)
gTTTCTCGAAGAAACAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCcaacaac > 1:2060178/1‑100 (MQ=255)
ttCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAATGTATTCCTTGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCcaacaacaa < 1:285863/100‑1 (MQ=255)
ttCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCcaacaacaa < 1:2115167/100‑1 (MQ=255)
ttCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCcaacaacaa > 1:2101779/1‑100 (MQ=255)
ttCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACATGGGGAAAGGCGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCcaacaacaa > 2:1488425/1‑100 (MQ=255)
tctcGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACaaa > 1:2531330/1‑100 (MQ=255)
ctcGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACaaaa > 2:726861/1‑100 (MQ=255)
cGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAAtt > 2:1258370/1‑100 (MQ=255)
aagaagCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTcc > 2:1076669/1‑100 (MQ=255)
agaagCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGGCGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCg > 1:2335462/1‑100 (MQ=255)
gaagCAGAGCTGGATTATCGCTTGATTAAGGTATACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGTATTTCGCCCAACAACAAAATTCCgg < 2:1180046/100‑1 (MQ=255)
aagCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGTGGAAAGGCGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGc < 1:1488441/100‑1 (MQ=255)
aagCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGc > 1:1196583/1‑100 (MQ=255)
agCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCa > 1:2837562/1‑100 (MQ=255)
gCATAGCTGTATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCgg < 1:1595948/97‑1 (MQ=255)
cAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAAt > 2:1241333/1‑100 (MQ=255)
cAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAAt < 1:2805427/100‑1 (MQ=255)
cAGAGCTGGATTATAGCTTGATTAAGGTAGACCTGGGGAAAGAAGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATCCCGGCaa > 2:2374365/1‑99 (MQ=255)
agagCTGGATTATCGCTTGATTAAGGTAGTTCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAAt < 1:396319/99‑1 (MQ=255)
gagCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAAttg > 1:1500252/1‑100 (MQ=255)
gCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAAttgtt < 1:1548245/100‑1 (MQ=255)
cTGGATTATCTCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAAttgttg < 1:483562/100‑1 (MQ=255)
tGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGa < 1:2662082/100‑1 (MQ=255)
ggATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGAt < 1:2068599/100‑1 (MQ=255)
ggATTATCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGAt < 2:2060155/100‑1 (MQ=255)
tCGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATtct > 1:503644/1‑100 (MQ=255)
cGCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATtctc > 2:1659620/1‑100 (MQ=255)
gCTTGATTAAGTTAGTCCTGGGGAAATACGTTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTcc < 1:2994381/100‑1 (MQ=255)
gCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTcc > 1:1182559/1‑100 (MQ=255)
gCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTcc < 1:608072/100‑1 (MQ=255)
gCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTcc > 1:2034141/1‑100 (MQ=255)
gCTTGATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTcc < 1:1857180/100‑1 (MQ=255)
cTTGATTAAGGTAGACCTGGGGAAAGACAGTCTGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCt < 1:806865/100‑1 (MQ=255)
gATTAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGcc < 1:734171/100‑1 (MQ=255)
tAAGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGAt < 2:1713639/100‑1 (MQ=255)
aaGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATg < 2:2314129/100‑1 (MQ=255)
aaGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATg < 2:1724367/100‑1 (MQ=255)
aaGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGACTTTCGCCCCACAACAAAATTCCGGCCCTTGTTGCTCCTTCTCCTACCGa > 2:3026548/1‑98 (MQ=255)
aGGTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATgg > 2:1018987/1‑100 (MQ=255)
ggTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATggc < 1:1558935/100‑1 (MQ=255)
ggTAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAAAAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATggc > 1:110198/1‑100 (MQ=255)
tAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATggcgg < 2:419599/100‑1 (MQ=255)
tAGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATggcgg < 1:355795/100‑1 (MQ=255)
aGACCTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATggcggc < 1:1978704/100‑1 (MQ=255)
ccTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATGGCGGCGa < 2:2994042/99‑1 (MQ=255)
ccTGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTACCGATAGCAGCGaa > 1:472637/1‑100 (MQ=255)
tGGGGAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATGGCGGCGAAcc < 2:2837530/100‑1 (MQ=255)
nggAAAGACGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATGGCGGCGAACCGc > 2:1083516/2‑100 (MQ=255)
gggAAAGACGGTCATTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATGGCGGCGAACCGc < 2:1884708/100‑1 (MQ=255)
|
TCTATTTCGCCCCGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGGCGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATGGCGGCGAACCGC > NC_000913/2420631‑2420819
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
