Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F204 I0 R1
|
247 |
174.3 |
8556966 |
94.2% |
8060661 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,466,858 |
G→C |
52.6% |
A45G (GCC→GGC) |
bfd ← |
bacterioferritin‑associated ferredoxin |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,466,858 | 0 | G | C | 52.6%
| 24.2
/ 246.5
| 156 | A45G (GCC→GGC) | bfd | bacterioferritin‑associated ferredoxin |
| Reads supporting (aligned to +/- strand): ref base G (44/30); new base C (51/31); total (95/61) |
| Fisher's exact test for biased strand distribution p-value = 7.45e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.27e-01 |
Only 100 of 158 total aligned reads displayed.
AGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTT > NC_000913/3466760‑3466956
|
aaCGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGcccc > 1:3929685/1‑100 (MQ=255)
cGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCgg < 2:656818/100‑1 (MQ=255)
cGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCgg < 2:1927973/100‑1 (MQ=255)
gCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGac > 2:1294431/1‑100 (MQ=255)
gCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGac > 2:3873684/1‑100 (MQ=255)
gCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGac > 2:2184632/1‑100 (MQ=255)
gCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGac < 1:2669641/100‑1 (MQ=255)
cTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTACTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGaca > 1:2330016/1‑100 (MQ=255)
tACGAGTAAGTCAAAAAACACACTGCGTTTATGCGGGCTCCTCACACTCCGGCAGCTGCATTAATTCATCCTCCATCTCTTCACGCGCGCCCCGGAcaca < 1:3931065/100‑1 (MQ=255)
tACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGAcaca > 2:1794424/1‑100 (MQ=255)
tACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGAcaca < 2:1685501/100‑1 (MQ=255)
tACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGAcaca > 2:257945/1‑100 (MQ=255)
gtcaGTCAAAAAACACACTCCGTATATGCGGACTCCTTAAACTCCGCCACCTGCATAACTCCATCCTCCATCACTTCCCGCGCGGCCCGGACACCttt > 1:2592488/4‑98 (MQ=255)
gTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTa > 1:828313/1‑99 (MQ=255)
tAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTAcc < 2:3375596/100‑1 (MQ=255)
gTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCa > 1:1873989/1‑100 (MQ=255)
gTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCa > 1:2254739/1‑100 (MQ=255)
gTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCa > 1:1735433/1‑100 (MQ=255)
tCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCAc > 1:2770194/1‑100 (MQ=255)
tCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCAc > 1:171398/1‑100 (MQ=255)
tCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCAc > 1:3182305/1‑100 (MQ=255)
cAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACt > 1:2757872/1‑100 (MQ=255)
aaaaaaCACACTCCGTTTATGCGGACTCCTTAACCTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTg < 2:1362762/100‑1 (MQ=255)
aaaaaaCACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTg > 2:2849502/1‑100 (MQ=255)
aaaaaCACACTCCGTTTATGCGGACTCCTTAAACTCAGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGa > 1:951766/1‑100 (MQ=255)
cacacTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGcc < 1:1918436/100‑1 (MQ=255)
acTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGAc < 1:3238952/100‑1 (MQ=255)
cTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGAcc > 1:2851749/1‑100 (MQ=255)
cTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGAc > 1:1327673/1‑99 (MQ=255)
ccGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCgg > 2:1405010/1‑100 (MQ=255)
tATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATaa > 2:1643294/1‑100 (MQ=255)
tATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATaa > 2:2709903/1‑100 (MQ=255)
tGCGGCCTCCTTAAACTCCCGCAGCTGCATTAATTCATCCTCCCTCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGACGACAGGaaagtt > 1:1248639/1‑95 (MQ=255)
tGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACCCATTTCCCGCACTGACTGCCGACCGGaacca > 1:3752443/1‑95 (MQ=255)
ggACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAtttt > 2:582045/1‑100 (MQ=255)
ggACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAtttt < 2:1758958/100‑1 (MQ=255)
gACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAttttt < 2:1693044/100‑1 (MQ=255)
aCTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAtttttt < 2:519539/100‑1 (MQ=255)
cTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAttttttt > 1:2923296/1‑100 (MQ=255)
tCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTa < 1:1387608/100‑1 (MQ=255)
tCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGAAACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTa < 1:2927341/100‑1 (MQ=255)
tCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTa < 1:25941/100‑1 (MQ=255)
ccTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTaa > 2:3538204/1‑100 (MQ=255)
ccTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTaa > 2:363189/1‑100 (MQ=255)
ccTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTaa > 2:138064/1‑100 (MQ=255)
ccTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTaa > 1:4177470/1‑100 (MQ=255)
cTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAAt > 1:4197858/1‑100 (MQ=255)
cTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAAt > 1:3295057/1‑100 (MQ=255)
cTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTaag > 1:1673209/1‑99 (MQ=255)
cTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAAt > 1:773929/1‑100 (MQ=255)
cTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAAt > 1:148131/1‑100 (MQ=255)
ttAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTTAtt > 1:294680/1‑100 (MQ=255)
ttAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAAtt < 2:4118502/100‑1 (MQ=255)
gatctcGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCt < 2:3891965/95‑1 (MQ=255)
aCTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTg < 2:1826063/100‑1 (MQ=255)
cTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTgg > 1:2496879/1‑100 (MQ=255)
tCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGa < 1:2967012/100‑1 (MQ=255)
cGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCtagatc > 1:3891947/1‑95 (MQ=255)
ggCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGaatg > 2:21497/1‑98 (MQ=255)
gCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTg > 1:2671634/1‑100 (MQ=255)
tGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAg > 2:2783847/1‑100 (MQ=255)
tGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGCAATAAATTTTTTTAATTGCTGGAACGAGTGAg > 1:3743573/1‑100 (MQ=255)
tGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAg > 1:1355259/1‑100 (MQ=255)
gCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAgg > 2:1512706/1‑100 (MQ=255)
gCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAgg < 2:2036393/100‑1 (MQ=255)
cATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAggg < 2:3777451/100‑1 (MQ=255)
cATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAggg < 1:958419/100‑1 (MQ=255)
cATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAggg < 2:2911594/100‑1 (MQ=255)
aTTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAgggg < 2:3253638/100‑1 (MQ=255)
aTTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAgggg > 1:1414921/1‑100 (MQ=255)
aTTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAgggg > 2:1444807/1‑100 (MQ=255)
aaTTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGaaa > 1:830407/1‑100 (MQ=255)
aaTTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTATTTGCTGGAATGAATCAGGGGaaa > 1:2167177/1‑100 (MQ=255)
aaTTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGaaa > 2:3385976/1‑100 (MQ=255)
aaTTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGaaa > 2:878666/1‑100 (MQ=255)
aaTTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGaaa > 2:14431/1‑100 (MQ=255)
aTTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGaaaa > 2:272006/1‑100 (MQ=255)
aTTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGaaaa > 2:1568714/1‑100 (MQ=255)
aTTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGaaaa > 1:2004848/1‑100 (MQ=255)
ttCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAAc < 2:2923308/100‑1 (MQ=255)
tcctccATCACTTCGCGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTAAGGGGAAAACTGgc < 1:724009/100‑1 (MQ=255)
tcctccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgc < 2:2657086/100‑1 (MQ=255)
cctccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgcg < 2:1603630/100‑1 (MQ=255)
cctccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgcg < 2:3356173/100‑1 (MQ=255)
cctccATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgcg < 1:1566885/100‑1 (MQ=255)
ctccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgcgc < 1:4095435/100‑1 (MQ=255)
ctccATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGCGAGGGGAAAACTGgcgc > 1:148770/1‑100 (MQ=255)
ccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGcac > 2:3605758/1‑100 (MQ=255)
ccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGcac > 1:839569/1‑100 (MQ=255)
cATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGcaca > 2:3631969/1‑100 (MQ=255)
aTCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAg > 2:434272/1‑100 (MQ=255)
cACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGcc > 1:445623/1‑100 (MQ=255)
cACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGcc < 1:3091900/100‑1 (MQ=255)
aCTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCt > 1:3369751/1‑100 (MQ=255)
cTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTTCTTGAACGAGTAAAGGCAACACTGCAGCACAGc > 1:4072579/1‑97 (MQ=255)
tCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGAc < 2:3926246/100‑1 (MQ=255)
tCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGAc < 2:1290364/100‑1 (MQ=255)
cACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACg > 1:1582241/1‑100 (MQ=255)
cACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGAc < 2:1503/99‑1 (MQ=255)
ggCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAAttttt < 2:2496886/100‑1 (MQ=255)
|
AGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTT > NC_000913/3466760‑3466956
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
