Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F133 I0 R1
|
200 |
171.4 |
8351354 |
94.3% |
7875326 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,466,858 |
G→C |
16.1% |
A45G (GCC→GGC) |
bfd ← |
bacterioferritin‑associated ferredoxin |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,466,858 | 0 | G | C | 16.1%
| 521.7
/ 76.1
| 190 | A45G (GCC→GGC) | bfd | bacterioferritin‑associated ferredoxin |
| Reads supporting (aligned to +/- strand): ref base G (74/85); new base C (15/16); total (89/101) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 199 total aligned reads displayed.
TAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTTT > NC_000913/3466759‑3466957
|
ggAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGc > 1:1680478/2‑100 (MQ=255)
aGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATTCTGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGc < 2:2618704/100‑1 (MQ=255)
aGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGc > 2:2711666/1‑100 (MQ=255)
aGAACGGCTTACGAGTAAGTCAAAAAACACACTCAGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCgg > 2:1442405/1‑99 (MQ=255)
aCGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCg < 1:503015/100‑1 (MQ=255)
cGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCgg < 1:2843091/100‑1 (MQ=255)
cGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCgg < 1:3260284/100‑1 (MQ=255)
cGGCGTACGAGTAAGTCAAAACACACACTCCGTTTATGCGGACTCCTTGAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCgg < 2:1671874/100‑1 (MQ=255)
ggCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGa > 2:3162331/1‑100 (MQ=255)
gCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAGCTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGac < 2:1097576/100‑1 (MQ=255)
gCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGac < 1:1110362/100‑1 (MQ=255)
tACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGAcaca > 2:2133927/1‑100 (MQ=255)
cGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACAtt > 1:1373726/1‑100 (MQ=255)
cGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACAtt > 1:1911965/1‑100 (MQ=255)
cGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCCCGGCCCGGACACAtt > 2:3509885/1‑100 (MQ=255)
gAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACAttt < 1:1406120/100‑1 (MQ=255)
gAGTAAGTCAAAAAACACACTCCGTTTATGCCGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACAtt < 2:488672/99‑1 (MQ=255)
aGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTCATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGc > 1:3768912/1‑100 (MQ=255)
gTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCa > 1:980730/1‑100 (MQ=255)
tCAAAAAACACACTCGGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCAc > 2:975734/1‑100 (MQ=255)
tCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCAc > 2:928059/1‑100 (MQ=255)
tCAAAAAACACACTCCGTTTATGCGGACTCCTTAAAATCCGGCAGCTGCATTAATACATCCTCCATCACTTCAAGCGCGGCCCGGACACATTTCCCGCa > 2:3924443/1‑99 (MQ=255)
gaaaaaaCACACACCGTGTCTGCGGACCCATTAAACTCCGGCAGCCGCCTTAATTCAGCCTCCATCACCTCACGCGCGCCCCGGACACCTTTACCGCAc > 2:747644/2‑99 (MQ=255)
aaaaaaCACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTg < 1:2521982/100‑1 (MQ=255)
aaaaaaCACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTg > 1:3837781/1‑100 (MQ=255)
aaaaaaCACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTg < 2:4111016/100‑1 (MQ=255)
acacacTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGc > 1:3679154/1‑100 (MQ=255)
cacacTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGcc < 2:233345/100‑1 (MQ=255)
cacacTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGcc < 1:3208873/100‑1 (MQ=255)
acacTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCg < 1:264625/100‑1 (MQ=255)
acTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGAc < 2:73803/100‑1 (MQ=255)
cTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGAc > 2:1185312/1‑99 (MQ=255)
tCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCg > 1:1057732/1‑100 (MQ=255)
cGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGa > 1:1350373/1‑100 (MQ=255)
tttATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAAt < 1:792470/100‑1 (MQ=255)
tATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATaa > 2:2051614/1‑100 (MQ=255)
tATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATaa > 1:275883/1‑100 (MQ=255)
gCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAtt < 2:2961231/100‑1 (MQ=255)
gCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAtt < 2:125702/100‑1 (MQ=255)
cGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAttt > 1:3568162/1‑100 (MQ=255)
ggACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAtttt < 1:2336169/100‑1 (MQ=255)
aCTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAtttttt < 1:1470315/100‑1 (MQ=255)
aCTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAtttttt < 2:2451049/100‑1 (MQ=255)
aCTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAtttttt < 1:3092563/100‑1 (MQ=255)
cTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAAttttttt < 2:653246/100‑1 (MQ=255)
ccTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTaa > 2:2197668/1‑100 (MQ=255)
ccTTAAACTCCGGCAGCTGCATTAATTCAACCTCCATCACTACACGCGCGGCCCGGACACATTCACCGCACTGATTGCCGACCGGAATAAATTTTTTTaa > 1:1194892/1‑100 (MQ=255)
cTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAAt > 2:1595733/1‑100 (MQ=255)
cTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAAt < 2:103449/100‑1 (MQ=255)
tAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTg > 1:1544064/1‑100 (MQ=255)
aaaCTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGc < 1:562050/100‑1 (MQ=255)
aaaCTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGc < 1:2167718/100‑1 (MQ=255)
aaaCTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGc > 1:2311644/1‑100 (MQ=255)
cTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTgg > 1:2320443/1‑100 (MQ=255)
tCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGa > 1:1592253/1‑100 (MQ=255)
tCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGa > 1:704417/1‑100 (MQ=255)
aGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGt < 2:1723292/100‑1 (MQ=255)
cTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTGTTTAATTGCTGGAACGAGTg < 2:2537978/99‑1 (MQ=255)
tGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAg < 1:4106247/100‑1 (MQ=255)
tGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAg > 1:1222869/1‑100 (MQ=255)
tGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAg < 1:3871030/100‑1 (MQ=255)
gCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAgg > 1:3510139/1‑100 (MQ=255)
gCATTAATTCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAg > 2:2481227/1‑99 (MQ=255)
cATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAggg > 1:1972192/1‑100 (MQ=255)
cATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAggg < 2:3331459/100‑1 (MQ=255)
aTTAATTCATCCGCCATCACTTCACGCGCGCCCCGGACACAGTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAgggg < 1:278155/100‑1 (MQ=255)
ttAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGa < 2:3739976/100‑1 (MQ=255)
ttAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGa > 1:2241690/1‑100 (MQ=255)
aaTTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGaaa < 1:1178871/100‑1 (MQ=255)
aTTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGaaaa > 1:653943/1‑100 (MQ=255)
tCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACt > 2:1882718/1‑100 (MQ=255)
tCATCCTCCATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACt > 1:2103384/1‑100 (MQ=255)
cATCCTCCATCACGTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTg > 2:2571777/1‑100 (MQ=255)
aTCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACt > 2:3371707/1‑98 (MQ=255)
tcctccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgc < 2:2807486/100‑1 (MQ=255)
tcctccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgc < 1:1836745/100‑1 (MQ=255)
tcctccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgc < 2:2109470/100‑1 (MQ=255)
cctccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgcg < 1:4169711/100‑1 (MQ=255)
cctccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgcg < 2:813411/100‑1 (MQ=255)
cctccATCACTTCACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGgcg < 2:250977/100‑1 (MQ=255)
tccATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGca < 2:511197/100‑1 (MQ=255)
cATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGcaca > 1:3995646/1‑100 (MQ=255)
tCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAGTTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGc < 1:2942586/100‑1 (MQ=255)
cACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGcc < 1:3182673/100‑1 (MQ=255)
aCTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCt < 1:1928141/100‑1 (MQ=255)
ttCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTgn < 2:3053671/100‑2 (MQ=255)
tCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGAc < 1:2988187/100‑1 (MQ=255)
tCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGAc < 2:768177/100‑1 (MQ=255)
cACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACg < 2:1902915/100‑1 (MQ=255)
cACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACg > 2:3184545/1‑100 (MQ=255)
cACGCGCGCCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACg < 2:182763/100‑1 (MQ=255)
cgcgGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAAtt > 1:646618/1‑100 (MQ=255)
gcgGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAAttt < 1:1062528/100‑1 (MQ=255)
cgGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAAtttt < 2:2775606/100‑1 (MQ=255)
gCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAAtttttt < 1:45088/100‑1 (MQ=255)
gCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAAtttttt < 1:3410022/100‑1 (MQ=255)
gCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAAtttttt < 1:2593201/100‑1 (MQ=255)
gCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAAtttttt < 1:2565039/100‑1 (MQ=255)
gCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAAtttttt > 1:2398238/1‑100 (MQ=255)
gCCCCGACACATTTACCGCACTGATTATCGTCCGGAATAAATTTTTTTTATTGCTGGAACTAGTGTGGCGAAAAATGGCGCACTGCCTGACGAAtgttt > 2:3850284/1‑99 (MQ=255)
|
TAGAACGGCTTACGAGTAAGTCAAAAAACACACTCCGTTTATGCGGACTCCTTAAACTCCGGCAGCTGCATTAATTCATCCTCCATCACTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTTT > NC_000913/3466759‑3466957
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
