Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,712,518 |
(C)6→5 |
100% |
intergenic (+360/‑251) |
nth → / → dtpA |
DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,712,513 | 0 | C | . | 99.0%
| 474.7
/ ‑2.1
| 103 | intergenic (+355/‑256) | nth/dtpA | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base . (58/44); total (58/45) |
| Fisher's exact test for biased strand distribution p-value = 4.37e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 |
Only 100 of 116 total aligned reads displayed.
TATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCACCCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCA > NC_000913/1712414‑1712608
|
tatTGAGCTACAAAACATTACACTGGCTATTTTTCAGAAACTGTACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAc < 2:2395192/100‑1 (MQ=255)
tatTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAc > 2:1148837/1‑100 (MQ=255)
gACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAccccc > 1:3987537/1‑100 (MQ=255)
gACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAccccc < 2:348347/100‑1 (MQ=255)
gACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAccccc < 2:3296618/100‑1 (MQ=255)
gACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAcccac > 2:3869918/1‑98 (MQ=255)
aCCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAccccct > 1:905572/1‑99 (MQ=255)
aCCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAcccccc < 1:3696070/100‑1 (MQ=255)
ccTACAAAACATTACACTGGCTATTTTTTTTTTTTTTTACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAccccc > 2:697512/1‑98 (MQ=255)
ccTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAccccctc < 1:1588989/100‑3 (MQ=255)
cTACAAAACATTACACTGGCTATTTTTTTTTTTTTTTTCTATCTCAATAGTAAAAACGCTAAATATCAGAACATATCGCCGTTAAGCGATCAccccctc > 2:3654428/1‑97 (MQ=255)
cTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCAccccctct < 1:2939720/100‑4 (MQ=255)
aCAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATATCAGAACATATCGCCATTAAGCCATTActccctctc > 2:2040698/1‑95 (MQ=255)
aCAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTca > 2:3890549/1‑100 (MQ=255)
aCAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTca > 1:3125122/1‑100 (MQ=255)
aCAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTca > 1:1440401/1‑100 (MQ=255)
aaaaCATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTcagt < 2:3960395/100‑1 (MQ=255)
aaaaCATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTcagt < 2:3369092/100‑1 (MQ=255)
aaaCATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTcagtg < 2:3791678/100‑1 (MQ=255)
aCATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTcagtgca < 2:358852/100‑1 (MQ=255)
aCATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTcagtgc < 2:513788/99‑1 (MQ=255)
cATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTcagtgcag < 2:3259317/100‑1 (MQ=255)
cATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTcagtgcag < 1:1689994/100‑1 (MQ=255)
aTTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTcagtgcagt > 1:881600/1‑100 (MQ=255)
acacTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑aa > 1:3009144/1‑100 (MQ=255)
cacTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑aaa < 1:2459279/100‑1 (MQ=255)
cTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATc < 2:3879040/99‑1 (MQ=255)
cTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCt > 1:3241995/1‑100 (MQ=255)
tATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTg < 2:4049751/100‑1 (MQ=255)
tttttCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGc > 2:2570863/1‑99 (MQ=255)
ttCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGtt > 1:1433449/1‑100 (MQ=255)
cAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTAc > 2:3639477/1‑100 (MQ=255)
cAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTAc > 2:271895/1‑100 (MQ=255)
cAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTAc > 1:1543454/1‑100 (MQ=255)
aGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACg > 2:2802865/1‑100 (MQ=255)
gAAACTGGACTATCTCACTAGTAAAAACGCGAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CACACACTCACTGCAGTG‑AAAAAATCTGCCGTTACg > 2:3779605/1‑99 (MQ=255)
aaCTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCCTCA‑CCCCCTCTCAATGCATTG‑AAAAAATCTGACGTTACAtt > 2:1139678/1‑99 (MQ=255)
cTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTGAAAAAAATCTGCCGTTACGtttt > 2:1448/1‑100 (MQ=255)
ggACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGtttttt > 1:53797/1‑99 (MQ=255)
ggACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTg < 1:1109514/100‑1 (MQ=255)
ggACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTg < 1:52978/100‑1 (MQ=255)
ggACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTg < 1:885747/100‑1 (MQ=255)
gACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTg < 2:3987511/99‑1 (MQ=255)
aCTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CACACTCTCAGTGCAGTG‑AAAAAATCTACCGTTAAGTTTTTTg < 2:623259/98‑1 (MQ=255)
cTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGaaa < 1:4098489/100‑1 (MQ=255)
aTCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGaaaa > 2:3423709/1‑99 (MQ=255)
ctcACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAATAAtt > 2:2615561/1‑100 (MQ=255)
ctcACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAAtt > 1:3298432/1‑100 (MQ=255)
tcACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGAAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAAttt > 2:2890426/1‑100 (MQ=255)
cACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTa > 1:3422072/1‑100 (MQ=255)
aatAGTAAAAACGCTAAATAGCAGAACATAGCGCCGTTAAGCCATCA‑CCCCCTCTAAAAACAGAA‑AAAAAATCTGCCGTTACGTTTTTTGAAAAAt < 2:838008/94‑1 (MQ=255)
tAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAAc > 2:1693214/1‑99 (MQ=255)
gTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCt > 2:1120708/1‑100 (MQ=255)
gTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCt < 2:790280/100‑1 (MQ=255)
aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTgg < 1:875783/100‑1 (MQ=255)
aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTgg > 1:1803441/1‑100 (MQ=255)
aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTgg < 2:1619412/100‑1 (MQ=255)
aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTgg > 1:3730906/1‑100 (MQ=255)
aaaaaCGCTAAATAGCAGAACATATCGCCGTTAAGACATCA‑CCCCCTCTCAGTGCAGTG‑CAAAAATCTGCCGTTACGTTTTTTGCAAAATTTAACGCTgg < 2:1219950/100‑1 (MQ=255)
aaaaCGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGa > 1:4106947/1‑100 (MQ=255)
aaaaCGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGa < 1:3402971/100‑1 (MQ=255)
aaCGCTAAATAGCAGAACATATCGCCGTTAAGCCATCACCCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGAt < 1:1148844/100‑1 (MQ=255)
cGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAAc < 1:2322071/100‑1 (MQ=255)
cGCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAAc > 1:3738092/1‑100 (MQ=255)
gCTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACa < 2:3749203/100‑1 (MQ=255)
cTAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAACTTTAACGCTGGATAACAt > 2:1592813/1‑100 (MQ=255)
tAAATAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACAtt > 1:3998499/1‑100 (MQ=255)
aaaTAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACAttt > 1:1050767/1‑100 (MQ=255)
aaaTAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACAttt > 1:2104364/1‑100 (MQ=255)
aaaTAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACAttt > 1:1947982/1‑100 (MQ=255)
aaaTAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACAttt > 2:3377826/1‑100 (MQ=255)
tAGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAAGCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTccc < 2:2295477/100‑1 (MQ=255)
aGCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCg > 1:595684/1‑100 (MQ=255)
gCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATATCATTTCCCgg > 2:2705784/1‑100 (MQ=255)
gCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCgg < 1:3377846/100‑1 (MQ=255)
gCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCgg > 1:2885229/1‑100 (MQ=255)
gCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCgg > 1:2356382/1‑100 (MQ=255)
gCAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCgg > 1:3819180/1‑100 (MQ=255)
cAGAACATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGa < 1:1184204/100‑1 (MQ=255)
gAACATATCGCCGTTAAGCCCTCA‑CCCCCTCTCCGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCgg < 2:2404173/97‑1 (MQ=255)
aaCATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATg > 2:1774220/1‑100 (MQ=255)
gatctCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGt < 2:3202248/96‑1 (MQ=255)
cATATCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGt > 1:2968401/1‑100 (MQ=255)
atatCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGtt < 1:1345458/100‑1 (MQ=255)
tatTGCCGTTAAGCCATCA‑ACCCCTGTCAGTGAAATG‑GAAAAATCTGCCGTTACGTTGTTTGAAAAATTGAACGCTGGATAACATTTCCCGGAATGGTTg < 2:77844/100‑1 (MQ=255)
tatCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTg < 2:1114760/100‑1 (MQ=255)
tatCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTg < 2:1114831/100‑1 (MQ=255)
tatCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTg < 1:577099/100‑1 (MQ=255)
tatCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTg > 1:3123619/1‑100 (MQ=255)
atCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTACCGCTGGATAACATTTCCCGGAATGGTTg > 2:1747230/1‑99 (MQ=255)
atCGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGa > 1:1242393/1‑100 (MQ=255)
ngCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAAt > 1:1709919/2‑100 (MQ=255)
caccattAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAAt < 2:1235797/95‑1 (MQ=255)
cGCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGtagatc > 1:3202267/1‑95 (MQ=255)
gCCGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAAtt > 2:2952267/1‑100 (MQ=255)
cGTTAAGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTcc < 1:531445/100‑1 (MQ=255)
aGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTTTTTTTTTTTACACTGGAAAACATTTCCCGGAATGGTTTAATTcc > 2:2342759/1‑95 (MQ=255)
aGCCATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGcc < 1:3260850/100‑1 (MQ=255)
cATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCa > 1:554152/1‑100 (MQ=255)
cATCA‑CCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCa > 1:1067578/1‑100 (MQ=255)
|
TATTGACCTACAAAACATTACACTGGCTATTTTTCAGAAACTGGACTATCTCACTAGTAAAAACGCTAAATAGCAGAACATATCGCCGTTAAGCCATCACCCCCCTCTCAGTGCAGTG‑AAAAAATCTGCCGTTACGTTTTTTGAAAAATTTAACGCTGGATAACATTTCCCGGAATGGTTGAATTCCCCGCCTCA > NC_000913/1712414‑1712608
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
