Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I1 R1
|
165 |
53.8 |
2611523 |
96.4% |
2517508 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
4,242,942 |
Δ66 bp |
coding (510‑575/891 nt) |
malG ← |
maltose transporter subunit |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
4242942 |
4243007 |
66 |
45 [0] |
[0] 45 |
malG |
maltose transporter subunit |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 4242941 | 0 (0.000) | 41 (0.820) |
34/184 |
0.6 |
100% |
coding (576/891 nt) |
malG |
maltose transporter subunit |
| ? | NC_000913 |
4243008 = |
0 (0.000) | coding (509/891 nt) |
malG |
maltose transporter subunit |
GATK/CNVnator alignment
N/A
