Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,258,247 |
A→G |
F41L (TTC→CTC) |
psuG ← |
pseudouridine 5'‑phosphate glycosidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,258,247 | 0 | A | G | 99.3%
| 467.3
/ NA
| 137 | F41L (TTC→CTC) | psuG | pseudouridine 5'‑phosphate glycosidase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (62/73); minor base T (0/1); total (63/74) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 |
Only 100 of 137 total aligned reads displayed.
TTATGCCCTTCACGACCCAGTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAACGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTCCACTAACGATATAACG > NC_000913/2258099‑2258394
|
tATGCCCTTCACGACCCAGTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCgg > 1:605229/1‑151 (MQ=255)
gCCCTTCACGACCCAGTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGc > 2:381698/1‑149 (MQ=255)
ttCACGACCCAGTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATccc > 2:714277/1‑150 (MQ=255)
aCGACCCAGTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTga < 2:1501541/151‑1 (MQ=255)
aCGACCCAGTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTga < 1:923240/151‑1 (MQ=255)
cGACCCAGTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTga < 1:548439/150‑1 (MQ=255)
aCCCAGTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTTTTCAACTTCAATTGCGGTCTGGGCATTTTTTGGGAGCGGCATCCCGTgaga > 1:1015806/1‑150 (MQ=255)
aCCCAGTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGaa < 2:711087/151‑1 (MQ=255)
gTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAaataat < 1:772669/151‑1 (MQ=255)
tCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTc < 2:30948/150‑1 (MQ=255)
cAATTTCTTCTTTGCTGAACCCCGCTTGCATCCCGCCGCCAATAATGGCGATCGTGTCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACGTCAATTGCGGTCTGGGCATTTTGTGGGATCGGCATCCCGTGAGAAATAATGGTCgt < 1:1578597/151‑2 (MQ=255)
ttcttcTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAGTAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGGGAGAAATAATGGTCGAtt > 1:701126/1‑149 (MQ=255)
tcttctTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTcc > 2:1083492/1‑150 (MQ=255)
tcttctTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTcc > 2:567850/1‑150 (MQ=255)
tcttTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAgcg > 2:289842/1‑151 (MQ=255)
tcttTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTACGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCa < 2:1396100/148‑1 (MQ=255)
tttGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGcc > 2:467564/1‑151 (MQ=255)
tttGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAACGCCCTGTTTTAGAAAAGGTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGGGCGGCATCCCGTGAGAAATAATTGTCGGTTCCAGCGcc > 1:1315808/1‑151 (MQ=255)
tGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCcac > 3:281058/1‑151 (MQ=255)
gCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCcaca < 3:592590/151‑1 (MQ=255)
ttAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGGAAAGCGCCCTGTTTATGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCCGCGCCACAAc > 2:1287121/1‑151 (MQ=255)
tAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACaa < 3:192226/149‑1 (MQ=255)
aCCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGGCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCCCCACCgg > 4:584227/1‑151 (MQ=255)
cccACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTTTTCAAATTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCCCAACCGgtt > 3:510351/1‑151 (MQ=255)
ccACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGgttt < 2:1684240/151‑1 (MQ=255)
ccACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGgttt < 1:984309/151‑1 (MQ=255)
aCTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGgttttt > 2:332420/1‑151 (MQ=255)
ttCCTCCCGGCGGCAATTATGGCCATTGTTGGAAGTTCCGCGGCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGgttttttg < 2:324661/150‑1 (MQ=255)
ttCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTCTTTACGGATAGATTCTTCGACTTCAATTGCGGTCTGGGCATTTTTTGGGAGCGGCATCCCCTGAAGAATAATGGTCGGTTCCAGCGCCACGACCGgtttttttt > 2:156651/1‑149 (MQ=255)
atcaCGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGgttttttgtttt < 2:1543272/151‑1 (MQ=255)
atcaCGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGgttttttgttt < 1:1302702/150‑1 (MQ=255)
caCGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGgttttttgttttt < 1:251423/150‑1 (MQ=255)
caCGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGgttttttgttttt < 1:1250259/150‑1 (MQ=255)
caCGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGgttttttgttttt < 4:300468/150‑1 (MQ=255)
caCGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGgttttttgttttt < 2:226532/150‑1 (MQ=255)
caCGCCGCCAATAATGGCGATCGTGGCAGGCAAAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCCCAACCGgttttttgtttttt > 1:398455/1‑151 (MQ=255)
cgccgcCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTaa < 2:988505/151‑1 (MQ=255)
ataatGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCt < 1:544387/151‑1 (MQ=255)
atGGCGATCGTGGCAGGCCCAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGGGGTCTGGGGCTTTTGTGGGAGCGGCATCCCGGGAGAAATAATGGTCGATTGCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGt > 1:1391736/1‑145 (MQ=255)
tGGCGATCGTGGCAGGGACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGGGCCACAACCGGCTTTTTGTTTTTTAAAGCGTCCTGCAc > 2:389784/1‑151 (MQ=255)
ggCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCAc < 2:106282/150‑1 (MQ=255)
gCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCAc < 1:1610197/149‑1 (MQ=255)
cGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTc < 3:6321/151‑1 (MQ=255)
gATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTcc < 2:1297011/151‑1 (MQ=255)
ggCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGa < 1:664302/150‑1 (MQ=255)
ggCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGa < 4:281040/150‑1 (MQ=255)
aGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAAtt < 2:605313/151‑1 (MQ=255)
ggTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAAttt < 3:135218/151‑1 (MQ=255)
aGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGtaat < 2:1705893/151‑1 (MQ=255)
aGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGtaat < 1:935923/151‑1 (MQ=255)
aGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGtaat < 2:134001/151‑1 (MQ=255)
cgcCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCt < 3:350543/126‑1 (MQ=255)
cgcCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGtaataa < 1:1033304/151‑1 (MQ=255)
gcCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTaataat > 2:631642/1‑151 (MQ=255)
cccTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTaataat < 3:117043/150‑1 (MQ=255)
cccTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAAtt > 1:1343229/1‑151 (MQ=255)
cccTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAAtt < 1:531592/151‑1 (MQ=255)
ccTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTc > 1:461860/1‑151 (MQ=255)
cTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTc > 1:60325/1‑150 (MQ=255)
gTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCa < 4:538599/149‑1 (MQ=255)
gTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAgg > 1:64568/1‑151 (MQ=255)
tttACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAggg > 2:972215/1‑151 (MQ=255)
tttACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAgg < 1:105514/150‑1 (MQ=255)
ttACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAggg < 1:379111/150‑1 (MQ=255)
tACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAgggg > 2:1591779/1‑150 (MQ=255)
aCGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGa < 2:1250845/150‑1 (MQ=255)
cGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGaaa < 2:1327717/151‑1 (MQ=255)
aTAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAAttt < 2:770777/151‑1 (MQ=255)
tAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAAtttt > 2:614281/1‑151 (MQ=255)
aGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAAttttt < 1:1726603/151‑1 (MQ=255)
aGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAAtttt < 2:198303/150‑1 (MQ=255)
tttCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTa > 4:512780/1‑150 (MQ=255)
ttcaacttcaaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTc > 1:682682/1‑150 (MQ=255)
caacttcaaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAg < 1:151120/150‑1 (MQ=255)
caacttcaaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAg < 4:287870/150‑1 (MQ=255)
caacttcaaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGa < 2:1626518/151‑1 (MQ=255)
aacttcaaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGAc < 2:173264/151‑1 (MQ=255)
acttcaaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACa < 2:1070760/151‑1 (MQ=255)
aattcacTGGCGGTCTGGGCCGTTGTTGGGAGCGGCATCACGTTAGAAATAATGGTCGATTCCAGAGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTc < 1:1164486/144‑1 (MQ=255)
tcaaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACAtt < 2:904246/150‑1 (MQ=255)
tcaaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACAt < 1:1680060/149‑1 (MQ=255)
caaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTc > 1:487562/1‑150 (MQ=255)
caaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCt < 1:1532141/151‑1 (MQ=255)
caaTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCt > 1:44934/1‑151 (MQ=255)
aTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGc < 2:1681803/151‑1 (MQ=255)
aTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGc > 3:23939/1‑151 (MQ=255)
aTTGCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGc < 2:281258/151‑1 (MQ=255)
gCGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGtt < 1:628766/151‑1 (MQ=255)
cGGTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGtt < 2:191913/150‑1 (MQ=255)
ggTCTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTtct > 1:852066/1‑151 (MQ=255)
cTGGGCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTcc > 1:840027/1‑150 (MQ=255)
cTGGGCATTTTGTGGGACCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACATCCGGTTTTTTGCTTTTTAAAGTGTCCTGCACTTCCGGGGAACTTTGTCATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTtctc > 1:778206/1‑149 (MQ=255)
gggCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTcc < 4:7603/148‑1 (MQ=255)
gggCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTCCa < 1:72681/149‑1 (MQ=255)
gCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTCCACTaa < 4:466475/151‑1 (MQ=255)
gCATTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTCCACTa > 1:799477/1‑150 (MQ=255)
aTTTTGTGGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTCCACTAACg < 1:1582669/151‑1 (MQ=255)
tgtgGGAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTCCACTAACGatat > 3:523178/1‑151 (MQ=255)
gggAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTCCACTAACGATATAAc > 2:1192973/1‑151 (MQ=255)
ggAGCGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTCCACTAACGATATAACg < 2:1186375/151‑1 (MQ=255)
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TTATGCCCTTCACGACCCAGTAATTCAATTTCTTCTTTGCTTAACCCCACTTTCATCACGCCGCCAATAATGGCGATCGTGGCAGGTACAGCGCCCTGTTTACGAATAGTTTCTTCAACTTCAATTGCGGTCTGGGCATTTTGTGGGAACGGCATCCCGTGAGAAATAATGGTCGATTCCAGCGCCACAACCGGTTTTTTGTTTTTTAAAGCGTCCTGCACTTCCGGGGAAATTTGTAATAATTCAGGGGAAATTTTTAATTCAGACATTCTGCGTTCTCCACTAACGATATAACG > NC_000913/2258099‑2258394
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
