Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F113 I2 R1	19	51.3	1830242	91.7%	1678331	142.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,196,305	C→T	R395C (CGT→TGT)	icd →	isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,196,305	0	C	T	98.3%	150.7 / NA	59	R395C (CGT→TGT)	icd	isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase
Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (38/19); minor base G (0/1); total (39/20)
Fisher's exact test for biased strand distribution p-value = 3.45e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GACAAAGTAAATCCTGGCTCTATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGCGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACGGGAGCGTAACGCTCCCGTTGTTTTTTGTTAGGCTGCTAACGGTT  >  NC_000913/1196167‑1196444

gACAAAGTAAATCCTGGCTCTATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACCTAATTGTTAAAGGTATGGAAGGCGCACTCAACGCGAAAACCGTACCCTATGACTCCGAGCGCCt                                                                                                                                         >  2:533535/1‑143 (MQ=25)

 acgaaGTAAATCCTGGCTCTATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTGGAGTGCCTg                                                                                                                                        >  2:388633/4‑143 (MQ=255)

   aaaGTATTTCCTGGCTCTATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAATGCGAAAACCGTAACCTATGACTTCGAGTGTCTgat                                                                                                                                      <  2:153903/143‑1 (MQ=255)

   aaaGTAAATCCTGGCTCTATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACGTCGAGTGTCTgat                                                                                                                                      >  1:699829/1‑143 (MQ=255)

   aaaGTAAATCCTGGCTCAATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGCCCGAAGCAGCCACCAAAACTGATAACGGAATGCATGGCGCAATCCACGCGAAAACCGTCACCTCTGACTTCGAGTGTCTgac                                                                                                                                      >  2:192873/1‑142 (MQ=255)

       tAAATCCTGGCTCTATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAGGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTgatggat                                                                                                                                  >  1:91875/1‑143 (MQ=255)

          aTCCTGGCTCTATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAGAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGgc                                                                                                                               >  1:539664/1‑143 (MQ=255)

                  nctATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACAGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAAACAACGCGAANACCGTAACCTAGGACGTCGAGTGACTGAGGGGTGGCGCTaaaaa                                                                                                                       >  2:104849/2‑141 (MQ=21)

                       tattCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAAGTATTGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGa                                                                                                                  <  1:816817/143‑1 (MQ=255)

                        attCTCTCCGCTTGGATGATGCTGCGCCATATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAGCGGTCTCGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGaa                                                                                                                 <  2:795283/143‑1 (MQ=18)

                            tctcCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGCTGGCGCTACACTGCTGAACTGt                                                                                                             >  1:410930/1‑143 (MQ=255)

                            tctcCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGt                                                                                                             >  1:250175/1‑143 (MQ=255)

                                 gCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCaga                                                                                                        <  2:388074/143‑1 (MQ=255)

                                  cTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAAGGTTCagag                                                                                                       >  2:230854/1‑143 (MQ=255)

                                     agaTGATGCTGCGGCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGttt                                                                                                    <  1:554736/143‑1 (MQ=255)

                                         gatgCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTg                                                                                                >  1:229318/1‑143 (MQ=255)

                                              tgcGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGAcgcg                                                                                           >  1:810387/1‑143 (MQ=255)

                                                cgcCACACGGTGTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCGGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGat                                                                                         <  2:363108/143‑1 (MQ=18)

                                                 gcCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGCAATGTTCAGAGTTTGGTGACGCGatc                                                                                        >  1:239585/1‑143 (MQ=255)

                                                  ccACATGCGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGatca                                                                                       <  1:468032/143‑1 (MQ=255)

                                                   cataTGGATTGGACCGAAGCGGCTGACTTAATTGGTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGatcat                                                                                      <  1:143918/140‑1 (MQ=255)

                                                       tGGGTTGGACCGAAGCGGCTGACTTAATTGTTCAATGTATGGAAGGCGCAAGCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCGAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGaa                                                                                  <  2:265157/143‑1 (MQ=18)

                                                        gggTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCggag                                                                                 >  1:132564/1‑140 (MQ=255)

                                                            tGGACCGAAGCGGCAGACTTAATTGTTGGAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACAt                                                                             <  1:164054/143‑1 (MQ=255)

                                                                gcGAAGCAGCTAGCTTAATGGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGGATTCTAGTGTGTGATGGATGGCGCGAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTaa                                                                         <  1:522852/142‑1 (MQ=17)

                                                                 cGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTCAACTGCTGCACTGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAAt                                                                        >  2:199923/1‑143 (MQ=255)

                                                                 cGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAGTGTTCAGAGTTTGGTGACGCGATGATCGCAAATATGTatt                                                                        >  2:637781/1‑141 (MQ=18)

                                                                 cGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAAt                                                                        <  1:848329/143‑1 (MQ=255)

                                                                 cGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGAAGGCGCTACCCCGCAGCATGGGTCAGAGGGTGGTGACGCGATCATCGAACCCATGTact                                                                        >  2:402751/1‑141 (MQ=17)

                                                                   aaGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGc                                                                      >  1:445552/1‑143 (MQ=255)

                                                                        gCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACGTGTAATGCCGTAg                                                                 >  1:85108/1‑143 (MQ=255)

                                                                            aCTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGCTGGATGGCGCTAAACTGCTGAACTGTTGTGTGCCAAGTCACGCGAAAGTCGTAGACGTGTAATGCCGTAGTTTg                                                             >  1:205145/1‑143 (MQ=18)

                                                                              ttAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGACACGTTCCGAGTTTGGTGACGCGATCATCGAAAACGTGTAATGCCGTAGGGTGtt                                                           >  1:249893/1‑143 (MQ=18)

                                                                              ttAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGCAAACATGTAATGCCGTAGTTGGtt                                                           >  2:338720/1‑143 (MQ=255)

                                                                              ttAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGtt                                                           >  1:677727/1‑143 (MQ=255)

                                                                                 aTTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGACATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTCATGCCGTAGGTTGCTaca                                                        >  2:368066/1‑141 (MQ=18)

                                                                                   tGTTACAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAAtt                                                      <  1:354782/143‑1 (MQ=255)

                                                                                   tGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCCAAAACATGTAATGCCGTAGTTTGTTAAAtt                                                      >  1:861908/1‑143 (MQ=255)

                                                                                     ttAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATtta                                                    >  1:378966/1‑143 (MQ=255)

                                                                                      tAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATttat                                                   <  2:250175/143‑1 (MQ=255)

                                                                                       aaaGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATttatt                                                  >  2:460435/1‑143 (MQ=255)

                                                                                            tATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACgg                                             >  1:127571/1‑143 (MQ=255)

                                                                                                gAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGCAATGTTCAGAGTTTGGTGACGCGATAATCGCAAACATGTAATGCCGTAGTTGGTTAAATTTATTAACGGGAGc                                         >  2:44427/1‑143 (MQ=255)

                                                                                                gAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTACCGGGGGc                                         >  1:162621/1‑143 (MQ=255)

                                                                                                      gcAATCAACGCGAAAACCGTAACCTATGACATCGAGTGTCTGATAGATGGCGCTAAACTGCTGAAATATTCAGAGGTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTGGTTACAATTATGAACGGGAGACTAACg                                   >  2:342264/1‑143 (MQ=21)

                                                                                                        aaTCAACGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGGTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTCGATTTATTAACGGGAGCGCAACGCt                                 >  2:836103/1‑143 (MQ=25)

                                                                                                          tCAACGCGAGAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACGTGATCGGAACGCTcc                               >  1:809442/1‑143 (MQ=25)

                                                                                                            aaCGCGAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAACCATGTAATGCCGTAGTTTGTTAAATTTATTAACGGTAGCGTGACGCTCCCg                             >  1:506463/1‑143 (MQ=255)

                                                                                                                cgAAAACCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACGGGAGCGTAACGCTCCCgttgt                         <  1:509767/143‑1 (MQ=255)

                                                                                                                     aCCGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACGGGAGCGTAACGCTCCCGTTGtttttt                    <  2:425752/143‑1 (MQ=255)

                                                                                                                     aCCGTAACCTATGACTGCGGGTGGCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACGGGAGCGTAACGCTCCCGTTGtttttt                    <  2:436594/143‑1 (MQ=255)

                                                                                                                      ccGTAACCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGACATGTTCAGAGTTTGGTGCCGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAAAGGGAGCGTAACGCTCCGCTTGTTTTTTg                   >  1:762650/1‑143 (MQ=25)

                                                                                                                           aCCTATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACGGGAGCGTAACGCTCCCGTTGTTTTTTGTTAgg              <  1:484716/143‑1 (MQ=255)

                                                                                                                              tATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCGGTAGTTTGTTAAATTCCTCAAAGGTAGCGTCACGCTCCCGTTGTTTTTTGTTAGgctg           >  2:189637/1‑143 (MQ=21)

                                                                                                                              tATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACGGGAGCGTAACGCTCGCGTTGTTTTTTGTTAGgctg           >  1:550751/1‑143 (MQ=255)

                                                                                                                              tATGACTTCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACGGGAGCGTAACGCTCCCGTTGTTTTTTGTTAGgctg           >  2:297090/1‑143 (MQ=255)

                                                                                                                                    ttCGAGTGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACGGGAGCGTAACGCTCCCGTTGTTTTTTGTTAGGCTGCTAACg     >  1:727369/1‑143 (MQ=255)

                                                                                                                                       gAGTGTCTGATGGATGGCGCTAAACTGCGGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTCACGGGAGCGTAACGCTCCCGTTGTTTTTTGTTAGGCTGCTAACGGtt  <  1:716979/143‑1 (MQ=255)

                                                                                                                                       gAGGGTCGGATGCAGGGCGCTAAACCGCTGAAATGTTCAGAGTGTGGTTACGCGTTCATCGAGCTCCTGTAATGCCGTAGTTTGTTAAATTTATTAACGGGAGCGTAACGCTCCCGTTGTTTTTTGTTAGGCTGCTAACGGtt  <  2:684921/143‑1 (MQ=255)

GACAAAGTAAATCCTGGCTCTATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGCGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAATGCCGTAGTTTGTTAAATTTATTAACGGGAGCGTAACGCTCCCGTTGTTTTTTGTTAGGCTGCTAACGGTT  >  NC_000913/1196167‑1196444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A