Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9101112 F55 I0 R1
|
156 |
414.6 |
11700970 |
99.6% |
11654166 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| JC |
CP006881 |
1,662,121 |
(AGCTGAAAGCC)2→1 |
9.1% |
coding (806‑816/1464 nt) |
U712_08545 → |
putative flagellar hook‑length control protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
CP006881 |
= 1662120 | 345 (0.920) | 32 (0.090) |
28/256 |
NT |
9.1% |
coding (805/1464 nt) |
U712_08545 |
putative flagellar hook‑length control protein |
| ? | CP006881 |
1662132 = |
325 (0.940) | coding (817/1464 nt) |
U712_08545 |
putative flagellar hook‑length control protein |
Only 100 of 102 total aligned reads displayed.
ACTAATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP006881/1661960‑1662120
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgaaagccTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATGCTGTT > CP006881/1662132‑1662280
ACTAATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTC‑AAAAGGGACCAAAGAATGGAGTTTA > 1:1397811/1‑150
CTAATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTA > 1:3636337/1‑150
CTAATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTA < 2:5116314/150‑1
TAATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAG > 1:4008761/1‑150
TAATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAG < 2:5777623/150‑1
AATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGTTTAATGGTTCAAATGTCTATGCTTCCTCAAAAAGGGACGAAAGAATGGAGTTTAGC < 2:2282981/150‑1
AATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGTTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGC < 2:2282979/150‑1
AATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGC > 1:2409167/1‑150
AATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGC > 2:489325/1‑150
atcCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGCCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCT < 1:1200504/147‑1
ATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGGGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCT > 1:4925624/1‑150
ATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTTAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCT < 1:2064785/150‑1
ATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCT > 2:4633316/1‑150
ATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCT > 2:4234446/1‑150
ATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCT > 1:3996701/1‑150
ATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATAACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCT < 1:2832530/150‑1
TTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTG > 1:852460/1‑150
TTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGAGACCAAAGAATGGAGTTTAGCTG > 2:4270611/1‑150
TTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACACGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTG < 1:229991/150‑1
TCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGA < 1:996782/150‑1
TCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGA > 1:5242995/1‑150
TCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGAAACCAAAGAATGGAGTTTAGCTGA > 1:313206/1‑150
CAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAA > 1:1398975/1‑150
agcATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAA > 1:2007619/4‑150
AGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAA > 1:796273/1‑150
AGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAA < 1:883307/150‑1
AGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAA > 2:4356303/1‑150
AGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTACAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTACAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGGTGAAA < 1:883292/150‑1
GGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAG > 1:5831044/1‑150
GGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAG > 2:163925/1‑150
GGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAG < 2:2386361/150‑1
cATCTTGCACAGCAAAGATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGC > 1:5459441/2‑150
ATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCC < 1:1694526/150‑1
ATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCC > 2:4689630/1‑150
TTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTC < 2:1907737/150‑1
AAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTT < 1:1191715/150‑1
ACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGT > 2:5777845/1‑150
CAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTTGCTGAAAGCCTTCTTGTT > 1:4585956/1‑150
AGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTA < 2:4278161/150‑1
AGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTA < 1:2040666/150‑1
GCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTAT < 2:4509068/150‑1
TCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCA > 2:3741268/1‑150
TCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCA < 2:5317856/150‑1
TCACTAAAGCTGAGCCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCA > 1:418097/1‑150
ACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATC > 2:5214231/1‑150
TAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAAACATCCG < 2:5261729/150‑1
AGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAAT > 2:3115243/1‑150
AAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGG < 2:418097/150‑1
ACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGA < 2:568001/150‑1
TGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTC > 2:483578/1‑150
GAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTC > 1:4874158/1‑150
AAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGT > 2:2907737/1‑150
GTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCA > 1:5591122/1‑150
ATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGC > 1:3744894/1‑150
TCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGG > 1:2098463/1‑150
AAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGAT > 2:167347/1‑150
ATGTCTATGCTTCCTC‑AAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTT < 2:1397811/150‑1
TTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGT > 1:1966508/1‑150
TTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGT > 2:5621943/1‑150
CTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATT < 2:4776491/150‑1
AAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAG > 2:5346118/1‑150
AAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCCTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAG > 1:5781898/1‑150
AAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGC < 1:5777845/150‑1
ACCAAAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGA > 1:2830202/1‑150
CCAAAGATTGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATTCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGAT < 1:2963717/150‑1
AAGAATGGAGTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGT > 2:3877914/1‑150
AATGGACTTTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAA > 1:3216771/1‑150
TTAGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACT < 2:4217030/150‑1
AGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCC > 2:5335786/1‑150
AGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCC < 2:852460/150‑1
AGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCC > 1:4356291/1‑150
AGCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCC > 2:3002948/1‑150
GCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCA > 2:4268320/1‑150
GCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCA > 1:2917951/1‑150
GCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCA < 2:5692347/150‑1
GCTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCA > 2:1051415/1‑150
CTGTAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAA > 2:4438449/1‑150
CTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAA < 2:158827/150‑1
CTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAA > 1:5152937/1‑150
CTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAA > 1:5161433/1‑150
CTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAA < 2:10402/150‑1
CTGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAA > 1:1490535/1‑150
TGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAA > 1:3815388/1‑150
TGAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAA > 2:492240/1‑150
GAAAGCCTTCTTTCTATCGAAACCATCCTAATCAACACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAAT < 2:2952079/150‑1
GAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAANNTGCATCGGATGTTTCTGGAAGGATTCAGCCTGTAGATAGTAAATCAGGACTCCAAAT > 1:800196/1‑150
GAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGGTAGTAAATCAGGACTCCAAAT > 2:4335873/1‑150
GAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAAT > 1:3026877/1‑150
GAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAAT < 1:5702345/150‑1
GAAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAAT < 2:4263122/150‑1
AAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATG > 1:1328607/1‑150
AAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATG > 1:2962545/1‑150
AAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATG > 2:1719480/1‑150
AAAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATG > 2:3788122/1‑150
AAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATGC < 2:4407803/150‑1
AAGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATGC > 2:1791263/1‑150
AGCCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGTGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGTAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATGCT > 1:4890689/1‑150
CCTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATGCTGT < 2:4739296/150‑1
CTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATGCTGTT < 1:5732510/150‑1
CTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATGCTGTT < 2:3996701/150‑1
ACTAATTCAGGATCTTAAACAGCAAATATTCACTAAAGCTGAGTCAAGTTCAAAACTTTACTCGATGACAGCGTCAGAGCTGAAAAGTTTTCAAAGCTTAATGGATCAAATGTCTATGCTTCCTCAAAAAGGGACCAAAGAATGGAGTTTAGCTGAAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP006881/1661960‑1662120
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgaaagccTTCTTGTTATCGAAATCATCCGAATCATCACAAGACTTTGGGAAGAGTGTTCTCACACCGCTCTCGCAGAGTTCATCCAGCAAAAATGCATCGGATGTTTCTGGAAGTATTCAGCCTGTAGATAGTAAATCAGGACTCCAAATGCTGTT > CP006881/1662132‑1662280
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
