Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F28 I0 R1
|
67 |
124.6 |
2504412 |
97.6% |
2444306 |
226.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,206,438 |
G→A |
18.1% |
intergenic (‑182/‑25) |
ttdR ← / → ttdA |
transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,206,438 | 0 | G | A | 18.1%
| 205.6
/ 16.7
| 112 | intergenic (‑182/‑25) | ttdR/ttdA | transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (30/57); new base A (11/9); total (45/67) |
| Fisher's exact test for biased strand distribution p-value = 1.25e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 113 total aligned reads displayed.
CCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTC > NC_000913/3206214‑3206676
|
ccAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAAc < 2:872787/239‑1 (MQ=255)
tACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGGCT‑CAATTTTT‑CAGACCAATACAAAAACTCGa > 1:314969/1‑239 (MQ=255)
tACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑TGGATTTTTTCCATAAAAAAACaaaaatagt > 2:555187/1‑235 (MQ=255)
tACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GGATTTTTTCAGACCAATAaaaaaaattgg > 1:975127/1‑234 (MQ=255)
aCCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTTAGACAAATACAAAAAATGAA‑g > 1:599583/1‑239 (MQ=255)
aCCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAGACAAATACAAAAAATaga‑g > 1:480813/1‑239 (MQ=255)
aCCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑g < 1:213386/239‑1 (MQ=255)
tGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTTATACAAATAAAAAAACATGA‑GTTg > 1:311670/1‑239 (MQ=255)
tGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTTAGACACATACaaaaaatcgggtt > 1:613454/1‑230 (MQ=255)
gCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGc < 1:908141/239‑1 (MQ=255)
cTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCg < 1:81087/238‑1 (MQ=255)
tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGa < 2:1153003/238‑1 (MQ=255)
tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGa < 2:206757/238‑1 (MQ=255)
tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGa < 1:460665/238‑1 (MQ=255)
aaGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACa < 2:856585/204‑1 (MQ=255)
cAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGtaat < 2:363801/238‑1 (MQ=255)
aGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAGACAAAAACAAAAAATTGG‑GTTGTCA‑TTGTGTGGGGAAGgaataa > 1:522800/1‑239 (MQ=255)
ttCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AAc < 2:864547/239‑1 (MQ=255)
aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAgg < 1:75802/236‑1 (MQ=255)
aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAgg < 2:1186004/236‑1 (MQ=255)
aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAgg < 1:220231/236‑1 (MQ=255)
cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTg < 2:118861/239‑1 (MQ=255)
cGTTAATTATCCGCAGTTGGGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑A‑GAATTTTTTCAGGCAAAAACAAAAACTTGA‑GGTGGCA‑TTGTGTGGGAAAGGAATAAGC‑AAAAggacggg > 1:975497/1‑234 (MQ=255)
ttAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAAAACAATACAAAAACATGA‑GTTGCCC‑TGATGAGCGGAAAGAACAAGC‑cacaagaaaggaa > 1:194187/1‑230 (MQ=255)
tAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGaa < 1:986923/238‑1 (MQ=255)
tAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGaa < 2:142378/238‑1 (MQ=255)
aaTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACGGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATa < 1:390139/239‑1 (MQ=255)
tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAgaga < 2:297507/238‑1 (MQ=255)
tgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑G‑GAATTTTTTCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAATAATAAAC‑AAAAGGCAGTGAATAAGTTGACAGAGATTg > 1:487376/1‑239 (MQ=255)
cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCTTACAAAAACAAAAAACGGG‑GTTGGCA‑TGGTAGGCGAAAAGAATAAAG‑AAAAAGAAGTGCATAAATTGACAAAGAGTGTTGCT‑aa > 1:985118/1‑239 (MQ=255)
cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCCCATAAATACAAAAAATGGA‑GTTGGCA‑TGATGTGGGGAAGATATAAAC‑AACAAGCCGGGGATAAATTTATACAGATTTTTGCT‑aa > 1:43561/1‑239 (MQ=255)
tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAAACAAAAACAAAAAAAAGA‑GGTGTCA‑TGATGAGAGGAAAGAATAAAC‑AAAAGGAAAGGGATAAAATGACAGAGAATGGTGCT‑acaatttt > 1:433037/1‑231 (MQ=255)
tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGa < 1:1149144/184‑1 (MQ=255)
tCGAAAAACATTGCCATTCCCGGCTCTGGCGAAATTTTCATTCTTATTTTCGCGTTGATTCACAAACTGTTAATTACATATTCACGGTGGAAAAAAATAAAAAACCAC‑ATTTTTAGTGG‑TAGTTTGGGGGGG‑T‑AAATTTTTCCAGAAAAATAAAAAAACGGGA‑GTTGCCA‑TGATGAGCAAAATTAAAAAGC‑AACAGGCAGTAAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCa < 2:277728/239‑1 (MQ=255)
aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAGACAAAAAAAAAAACATGA‑GTTGGCA‑TGATGAGCGGAAGAAAAAAAA‑AAAAAGCAAGGAAAAAAATGACAGAGAATGTTGCT‑AAATTTACCCCCATGAt > 1:987055/1‑239 (MQ=255)
aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑‑AGTTTGTGGCGG‑T‑GAATTTTTTTCAACAAATACAAAAAATGGA‑GGTGTCA‑AGATGAGGGGAAGTAATAAGA‑AACAAGCAGTGAATAAATTGACAGAGATTGTCGCT‑AACTTTACCGCCATGAtt > 1:1217691/1‑237 (MQ=255)
tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑TAATTTTTTCTGACAAATAAAAAAAATTGA‑GTTGCCC‑CGTTGAGCGAAAGGAATAAGA‑AACAGGCACTGAATAAAATGACAAAGATTTTCGCT‑ACCTTTACCCCCATGCTTTCTTCCCGGATTccct > 1:73837/1‑237 (MQ=255)
tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTTAGACAAAAAAAAAAAATGGAGGTTGCCT‑TG‑TGGGGGGAAGGAAAAAAA‑AAAAGGCAATGAATAAGTTGATAAAGAGTTTCGCT‑TAATTTACCGCCATGATTTTTACACGacaggctc > 2:624652/1‑232 (MQ=255)
tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAg < 1:590123/187‑1 (MQ=255)
ctttGGCGCAATATTCATTCTTATTTTCGCGTTAATTCACGACCTGTTAATTACATATTCACGGTGACAAAAAATAAAAAACCAC‑ATTTTAAGTGG‑‑AGTTTGTGGCGG‑T‑AAATTTTTCCAAAAAAATAAAAAAACTGGA‑GTTGCCA‑TGATGAGAGAAAGTAATAACC‑AACAGGCAGTAAATAAGTTGACAGAGATGGCCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCtgatg < 2:1217691/236‑1 (MQ=255)
ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAGAAAAAAACAAAAAATGGA‑GTTGCCA‑TGATGAGGGGAAGAAATAAAA‑AAAAAGCAAGGAAAAAAAAGAGAGAGAATGGCGCG‑AAAATTACAGCGATGAATTTTACCCGaaagacagag > 2:1183843/1‑231 (MQ=255)
tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCAAAAGAAATAAGC‑AACAGGCAGTGAATAATTTGACAGAGATTGTCGTT‑AACTTTACCGCCATGATTTCTACCCGAATGCCtgatg < 1:826841/239‑1 (MQ=255)
tGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GGAAATTTCCCGTAAAATACAAAAAATTGT‑GGTGGTC‑AGATGAGGAAAAGAAATAAAC‑AAAAGGCAGTGAATTAGATGACAGAAAATGTCCCT‑AACTTTTTCGCCCTGCTTTCTTACCGTATACCttattaa > 1:800471/1‑236 (MQ=255)
gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GTAATTTTTCAGACAAATAAAAAAACTGGA‑GTGGCCA‑TGATGAGGGGAAGTAATAAGA‑AACAGGAAGAGCATAAAATGATAGAGATTGTCGCT‑AACTTTACCGCCCAGAATTCTACCCTAATGCCtgatggagt > 1:408108/1‑235 (MQ=255)
gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAGAAAAAAAAAAAAAATGGA‑GTTGCCA‑TGGTGGGCGGAAATAATAAAA‑AAAAAGCAGTTAATAAGTTGGCAGAGAATGTTGCT‑AAATTTTACCCCATAATTTTTAACCCAAATCCtggtggagg > 1:431741/1‑235 (MQ=255)
gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAAAAAAAAAAAAAAACTGGA‑GTTGCCC‑ATATGGGCGGAAGGAATAAAA‑AACAAGAAAGGAAAAAAGTTAAAAAAATTGTTGGTAAACTTTCCGCCCAGGATTTTTACCCGATTGccgatagagg > 1:581942/1‑231 (MQ=255)
gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑A‑GGATTTTTTCAGACAAAAAAAAAAAATGGA‑GTTGGCA‑TGTTGAGCGAAAGTAATAAAC‑AACCAGCAGGGAATAAATTGACAGAGAATGTCGCT‑AAATTTAACGCCCTGATTTCTAACCGAATGCCtgattgagt > 1:102849/1‑234 (MQ=255)
cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTTTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGGGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTAc < 1:572396/205‑1 (MQ=255)
cacAATATTCATTCTTATTTTCGCGTTGATACACGAACTTTTAATTACATATTCACGGTGGAAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGGGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACGGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgt < 2:863678/236‑1 (MQ=255)
cacAAAATTCATTCTTATTTTGGCGTTAATTCACGAACTGTTAATTACATAGTCAGGGGGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑AAGTTGGGGGGGG‑T‑GAATTTTTCCACAAAAATACAAAATCTGGT‑GTTCAGA‑AAGAGACGGAAAAAAACAAGC‑AACAGGTGGAGAATAAGAAGAAAAAGATTGTGGCA‑ATATTTACCGCCATGATTTCTACCCGAATGCCTGATGACgt < 2:796575/236‑1 (MQ=255)
caaaaTATCCATGCTTATTTCGACTTTGATGCAGCAATTGTAAATGACATTTTCACAGTGAAAAAAAAAATAAAACCAC‑ATTGAGAGTGG‑TAGTTGTGGGCGG‑T‑AAATTTTTCAAAACAAAAAAAAAAAAAGGA‑TTTGCGA‑TGATGATAAAAAGAAATAAGA‑AACAGGCGGTAAATAATTGGACAGGGTTTGTCCCA‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgt < 2:680323/235‑1 (MQ=255)
gcAATATTCATTCTTATTTTCGCTTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑AAATTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCAAAAGTAATAAGC‑AACAGGCAGTAAATAAGTTGACAGAGATTGTCGCT‑AATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg < 1:292805/238‑1 (MQ=255)
aaaaTATTAATTCTTATTTTGGCGTTGATTCACGATTTGTTAATTACAGATCCAGGGTGGAAAAAAATAAAAAACAAC‑ATTTTGAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTCCCAGACAAATACAAAAACAGGA‑GTTGCTA‑TGAGGAGCGAAATAAATAAGC‑ACCGGGAAGAGAATAAGTTGACAGATATTGTCGTT‑AACTTTCCCGCCATGATTTCTACCCGAATGCCTGATGACgtg < 1:904719/236‑1 (MQ=255)
tatttattTTTTTTTTCGCATTAATTCACTAAATTTTAATAACATATACAGGGTGGAAAAAAATAAAAATCCAG‑ATTATAGATGG‑GTTTTGGGGGGAG‑T‑GATTTTTTGCAGAGAAATAAAAATAGGGGG‑GTTGCGT‑AGAGGAGTAAAAGTAATAAGA‑AACGGGGTGTAGATAGGTAGAAAAGAATTGTCGGT‑AGCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa < 2:880155/239‑1 (MQ=255)
tatTCATTTTTAGTTTCGCGTTGATTCACGAACTGTAAATTACATATTCGCGGGGGCAAAAAATATAAAACCAC‑ATTTTTAGTGT‑TGGTTTGGGGCGG‑T‑AAATTTTCCCAGACAAAAACAAAAACTGGA‑GTTGCCA‑TAATGGGGGAAAATAATAAGA‑AACGGGCAGTAAATAAGTTGACAGAGTTTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa < 1:1115247/239‑1 (MQ=255)
aattcattcTTATTTTCGCGTGGATTCATGAACTGTTAAGTACAGATTCACGGGGGCAAAAAATATAAACCCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑AAATTTTTCCAGACAAAGACAAAAACTGGA‑GTTGCCT‑TGATGAGCGAAAGTAATAAGC‑ACCAGGCAGTGAATAAGTTGACAGAGATTGTCGTT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa < 1:911028/238‑1 (MQ=255)
attcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAgg < 1:872637/162‑1 (MQ=255)
ttcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAGACAAATACAAAAAATGGA‑GTTTCCA‑TGATTGACGAAAGTAATAAAG‑AACAGGCAATGAATAAGTTGACAGAGATTGTCCCT‑AACTTTACCCCCCTGATTTTTTTCCGCAAGCATTCTGACGGGGTGGATa > 1:769192/1‑239 (MQ=255)
ttATTTTCGCGTTGATTCACGAACTTTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaa < 1:939662/239‑1 (MQ=255)
tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTTAAAAAAAAAAAAAAAATGGA‑GTTGTTA‑TTATTAGCGGAAATAAAAAAC‑AAAAAGGAGTGAAAAAATTGACAGAGATTGTCGCT‑AAAATTACACACATCATTTTTAAACGAATGCCTGATGACATGTGGGGTAAAACaaaa > 2:461981/1‑239 (MQ=255)
tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCCAACAAAAACAAAAAATTGA‑GGTGTCC‑TTGTGAGGGGAAAGAATAAAA‑CACAAGCAGTGGATAAATTGACAGAGATTGTCGCT‑AAATTTACCGCCACGATTTCTTCCCCAATGCCTGATGGCGTGGGGGATTAACTaaaa > 2:680575/1‑239 (MQ=255)
ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAAATTTTTTCGACAAAAACAAAAAATGGA‑GTTGCCA‑TGATGAGCGAAAGGAATAAAC‑AAAAGGCAATGAATAAATTGACAGAGAATGTCGCT‑AACTTTACCGCCATGATTTTTTCCCGAAAGCCTGATGACGAGGTGGGtaaaataaaaaa > 1:1095181/1‑237 (MQ=255)
ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAAATTTTTCAGACAAATAAAAAAAATGGA‑GGTGCCC‑TGATGAGCGGGAGTAATAAGC‑AACACGCAGTGAATAAAGTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTTTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaaaa > 1:866702/1‑237 (MQ=255)
gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAAACAAAAACAAAAAATGGA‑GTTTGCA‑TGATGAGGGGAAGTAATAAAC‑AAAAGGCAGGGAAAAAGATGACAGAGATTGTCGGC‑AAATTTTCCGCCCTGAATTTTACCCCAAAACCTTGTGTCGTGGGGGGTAAACTTAAACAACTAAAg > 2:939662/1‑239 (MQ=255)
cGAACTTTAAATAACATATTCGCGGTGGAAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TATTTTGTGGCGG‑T‑AAATTTTTCCAGAAAAATAAAAAAACGGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGaa < 2:307624/239‑1 (MQ=255)
ttttATTTAAATATGCACGTTAGCAAAAAATATAAACCCAC‑A‑TTTTGGTGGTTAGTTTGTGGGGG‑T‑AATTTTTTCCAGAAAAATACAAAACCTGGT‑GTTGCCA‑TGATGAGCAAAAGTAAAAAGC‑AAGAGACAGTAAATAAGTTGACAGGAATTGTCGCT‑ATCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAAcgtc < 2:54715/237‑1 (MQ=255)
tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAAACAAATAAAAAAAAATGA‑GGTTCCA‑TGATGTGCGAAAGAAAAAAAC‑AACAAGCAGTGAAAAAGTTGGCAAAGATTTTCGCT‑AACTTTATCCCCATGATTTTTACCCGAAAGCCTGATGTAGTGGTGGGTAAAAAAAAACAGCTAAAAAAT‑GCCGcaaact > 2:70247/1‑235 (MQ=255)
ttAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑G‑GAAATTTTTCAAACAAATAAAAAAACTGGA‑GTTTGCC‑TGGTGGGCGACAGTAATAAGC‑AACAGGCAATGAATAAGTTGACAGAGATTGTCGCC‑CACTTTAACACCACTAATTTTACCCGAACACCTGATTTCGTGGTGGGTAAACTAAAAAAGCCCACAGAT‑GCCGAAAcgccc > 2:113577/1‑235 (MQ=255)
ttAATTACATATTCACGGTGGAAAAAAAAAAAAAACAAC‑ATTTTTAGTGG‑TAGTTGGTGGGGG‑G‑GAATTTTTCAAAAAAAATAAAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTAAATAAGTTAACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCtgatg < 2:511277/194‑1 (MQ=255)
aaTTACATATTCAGGGTGACAAAAAATAAAAAACCAA‑ATTTTTAGTGG‑TAGTTTGTGGGGG‑T‑GAATTTTTCCAGAAAAATACAAAAACGGGA‑GTTGCCA‑TGATGAGCGAAAGTAAAAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGtcgtcg < 2:522800/239‑1 (MQ=255)
aaTTACATATGCACGGTGGCAAAAAATAAAAAACCAC‑ATTTTTAGTGG‑TATTTTGGGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTGGCCA‑TGATGAGCAAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGtcgtcg < 1:1006830/239‑1 (MQ=255)
aatatTCACGGGGGAAAAAAATATAAAACAAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGAAAAAAAAAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATggg < 2:480813/238‑1 (MQ=255)
atatTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGGGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCAAAAGTAATAAGC‑AACGGGCAGTGAATAGTTTGACAGAAATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa < 1:799563/196‑1 (MQ=255)
tatTCAGGGTGGAAAAAAATATAAAACACA‑ATTTTTAGGGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATAAAAAAACTGGA‑GTTGCCA‑TGATGAGCAAAAGTAAAAAGC‑AACAGGCATTGAATAAGTTGACAGAGATTGTCGAT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGa < 1:425040/239‑1 (MQ=255)
tatTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTAATGGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGa < 1:1130141/239‑1 (MQ=255)
tatTCACGGGGGAAAAAAATAAAAACCCAC‑ATTTTTAGTGG‑TATTTTGTGGCGG‑T‑GAATTTTTCCAGAAAAAAACAAAAACTGGA‑GTTGCCA‑TGATGAGCAAAAGTAATAAGC‑AACAGGAAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGa < 1:532241/239‑1 (MQ=255)
atTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCCGACAAAAACAAAAACTGGG‑GTTTCCC‑TGATGAGCGAAAGTAATAAAC‑AACAGGAAGAGAATAAGTTGACAGAGATTGTCGCT‑AACTTTAACGCCCTGATTTTTACCCCAATGCCTGATGACGGGGGGGATAAACTAAAAAAAATAAAGGATGGCCGAAA‑ATCGTCGGTggggga > 1:262041/1‑237 (MQ=255)
atTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAGACAAAAAAAAAAAATGGG‑GGTGCCA‑TGGTGAGCGAAAGGAATAAGC‑AACAGGCAGTGAATAAATTGACAGAGATTTTCGCT‑TACTTTTCCCCCCTGATTTCTTACCCAAAGCCTGATGACGTGGGGGGTAAACTAAAACAACTAAAAGAA‑TCCCGAACAGCGTCGGTggggga > 1:232164/1‑237 (MQ=255)
atTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAAACAAAAACAAAAAATGGA‑GTTGGCC‑TGATGTGGGAAATGAATAAAA‑AACAAGCAGTGAAAAAGATGACAGAGAGTTTCGCT‑AACTTTTACGCCCTGATTTCTACCCGAATTCCTGATGACGGGGGGGGTTAAATAAAACAGATAAAAGAA‑GCCGCAACGTCCTCGCTgggggc > 2:1006830/1‑237 (MQ=255)
caggTGGAAAAAAATAAAAAACCAA‑ATTGTTATTGT‑TGGTTGGTGGCGG‑T‑AAATTTTTCAAAAAAAATACAAAAACTGGA‑GTTCCAA‑TGATGAGCGAAAGAAAAAAGC‑AACAGGCGGTGAATAAGTGGAAAGAGATTTCCGTT‑AATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAAtt < 2:1095181/237‑1 (MQ=255)
ggTGACAAAAAAAATAAACCCAC‑ATTTTTAGTGG‑TAGTGTGTGGCGG‑T‑GAATTTTTCCAGAAAAATAAAAAAACGGGA‑GTGGCCA‑TTAGAGGCAAAAGTAATAAGC‑AACAGGCAGTAATTAAGTTAAAAGAGATTGTCGTT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTAt < 1:506847/239‑1 (MQ=255)
tgggCAAAAAATATAAACCCAC‑ATTTTTAGGGG‑TAGTTTGTGGCGG‑A‑GAATTTTTCAAGAAAAATAAAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTAAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTAt < 2:190656/236‑1 (MQ=255)
gtgaaaaaaaaTAAAAAACCAA‑ATTTGTAGTGG‑TAGGTTGTGGCGG‑T‑GAATTTTACCAAAAAAAAACAAAAAGTGGA‑GTTGCCA‑TGATGAGCGAAAGAAATAAGC‑AACAGGCAGTGAATAAGTGGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTAt < 2:194187/233‑1 (MQ=255)
tGGCAAAAATAATAAAACCAC‑ATTTTTATTGT‑TAGTTTGTGGCGG‑T‑AAATTTTTCCAGACAAATAAAAAAACGGGA‑GTTGCCT‑TGATGAGCAAAATAAATAAGC‑AACAGGCAGTAAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATc < 1:1036074/238‑1 (MQ=255)
gCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAGACAAATAAAAAAACTGGA‑GTTGCCA‑TGATGAGCGGAAGGAATAAAC‑AACAAGCAGGGAAAAAGTTGACAGAGATTGTCGCT‑AACTTTAACGCCAAGATTTTTAACCGAATGCCTGATGACGTGGGGGGTAAAATAAAAAAGCTAAAGGAT‑GCCGAAAACTCGGCGATGGGGGAAAATATCTa > 1:608616/1‑238 (MQ=255)
gCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAAAAAAAAAAAAAAAATGGG‑GGTGGCA‑TGGTGAGCGGAAGGAAAAAAA‑AAAAGGCAGGGAATAAAATGAAAAAGAATGTTGCT‑AACATTAACCCCACGGTTTTTTCCCCAAATCCCGATGGCGCGGGGGGTAAAATCAAAAAACCAAAAAAT‑GCCGAAAAGAGGTCGCGGGGGGGAAATATCTa > 2:1048868/1‑238 (MQ=255)
aaaaaaTAAAGCGAC‑ATTTTTAGTGG‑TATTTTGTGGCGG‑T‑TAATTTTTCAAAAAAAAAACAAAAACGGGA‑GTTGCCA‑TGATGACGGAAAGAAAAAAGC‑AACAGGCAGTGAATAATTTCACATAGATTGCCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa < 2:1199158/239‑1 (MQ=255)
aaaaaaTAAAACCAC‑ATTTGTAGGGG‑TAGTTTGTGGCGT‑T‑AAATTTTTCCAGAAAAATACAAAAACGGGA‑GTTGCCA‑TGATGACGAAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGTTTGTCGCT‑AATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa < 1:555187/239‑1 (MQ=255)
aaaaTAAAAAACCAC‑ATTTTTAGGGG‑TAGTTTGTGGCGG‑T‑AAATTTTCCCAGAAAAAAACAAAAACGGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGTTTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa < 1:680575/239‑1 (MQ=255)
aaaaaaaaACACAATTTTTAGTGG‑TATTTTGTGGGGT‑T‑AAATTTTTCAAAAAAAATAAAAAAACTGGA‑GTTGCCA‑TGAGGAGCAAAAGTAATAAGC‑AACAGGCAGTGAATAAGTGGACAGAGATGGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg < 2:262041/235‑1 (MQ=255)
taAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTTCAGACAAATACAAAAAAAGGG‑GTTGCCA‑TGATGAGCGAAAGTAATAAAC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCCTGATTTCTTCCCGAATGCCTGATGAc > 1:478258/1‑166 (MQ=255)
ccgaaTTTTTAGTGG‑TAGTTTGTGGCGG‑T‑AAATTTTTCAAGACAAATACAACAACTGGA‑GTTGCCA‑TGATGAGCAAAAGTAATAGGC‑ACAAGGCAGTGAATAATGTGACAGAAATGTCCGTT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGac < 1:1177898/235‑1 (MQ=255)
cac‑aTTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAgg < 2:725546/92‑1 (MQ=255)
ac‑aTTTTAAGTGG‑TAGTTTGGGGCGG‑A‑AAAGTTGTCAAGAAAAATAAAAAAACGGGA‑GGTGCAA‑TGATGAGC‑AAAGAAAAAAACAAAGAGGTAGAAAAGAAGGTGACCAGGATAGTCGCT‑AACTTAACCGCCATGATTTCTACCCGAATGCCTGATGGCGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCAGACGATGTTCGacaa < 2:73837/239‑1 (MQ=255)
g‑TAGTTTGTGGCGG‑T‑GAATTTTTTCCGACAAATACAAAAAATGGA‑GTTTCCC‑TGATTAGCGGAAGTAATAAAC‑AACAAGCAGTGAATAAGTTGGCAGAGATTTTCGCT‑AACTTTACCGCCCTGATTTTTTCCCCAATGCCTGATGACGTGGTGGATAAACTAAAAAAACTAAAGGAT‑GCCGCAACGTCGTCGATGGGGGAAATTATCTACCATACGATGTTCGACAACATGCcaaaaac > 1:76032/1‑237 (MQ=255)
attttGTGGCGG‑T‑GAATTTTCCAAGACAAAAAAAAAACCTGGA‑TTTGCAA‑GGATGAGGGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTGGACAGAGATTGTCCCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa < 1:898436/237‑1 (MQ=255)
tgGGGG‑T‑AAATTTATCAAGAAAAAAAAAAAAACGGGG‑GATGCAA‑TGATGAGAAAAAGTAATAAGC‑AAAAGGCAGTGAATAAGTTAGAGGGGATTGCCGTA‑AACTTGACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc < 2:339576/238‑1 (MQ=255)
aattttCCAAAAAAAAAAAAAAACTGGG‑GTTGGCATTAAGGGGCGAAAGAAAAAAGC‑AAAGGGCAGTGAAAAAGTGGAAGGGGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCg < 2:987055/236‑1 (MQ=255)
acaaGACAAATAAAAAAACTGGT‑GTTGCCA‑TTATGAGCAAAAGTAATAAGC‑ACCAGGCGGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcc < 1:1231645/236‑1 (MQ=255)
gACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcatggc > 2:939611/1‑237 (MQ=255)
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CCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTTTAGTGG‑TAGTTTGTGGCGG‑T‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCA‑TGATGAGCGAAAGTAATAAGC‑AACAGGCAGTGAATAAGTTGACAGAGATTGTCGCT‑AACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGAT‑GCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTC > NC_000913/3206214‑3206676
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
