Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,892,514 |
T→C |
intergenic (+58/+62) |
b1810 → / ← b1811 |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,892,514 | 0 | T | C | 99.0%
| 598.5
/ ‑3.7
| 195 | intergenic (+58/+62) | b1810/b1811 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (128/64); total (131/64) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
Only 100 of 207 total aligned reads displayed.
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC > NC_000913/1892424‑1892603
|
tatatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGccc < 1:6350137/93‑1 (MQ=255)
tatatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGccc < 1:7752404/93‑1 (MQ=255)
atatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCt > 1:4466592/1‑93 (MQ=255)
atatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCt < 2:4426568/93‑1 (MQ=255)
atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttt > 2:1478745/1‑93 (MQ=255)
atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttt > 2:2381203/1‑93 (MQ=255)
atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttt > 2:539179/1‑93 (MQ=255)
gCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttttt > 2:3149151/1‑93 (MQ=255)
cAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtc < 1:965169/93‑1 (MQ=255)
aGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtct < 2:7391278/93‑1 (MQ=255)
ggAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtctc < 2:3237544/93‑1 (MQ=255)
ggAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtctc > 1:2956061/1‑93 (MQ=255)
gaaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACaa < 1:593278/93‑1 (MQ=255)
aaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAAt < 1:3148129/93‑1 (MQ=255)
tAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCaa > 2:1619955/1‑93 (MQ=255)
aaaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAt > 1:4099948/1‑93 (MQ=255)
aaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATg > 2:4567825/1‑93 (MQ=255)
aaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATg < 1:7296089/93‑1 (MQ=255)
tGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAATCGCCCTTTTTCTCACAATCAAATGatcatc > 1:7801197/1‑93 (MQ=255)
tGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGatcatc > 2:769742/1‑93 (MQ=255)
ggTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCg > 1:1752120/1‑93 (MQ=255)
tCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGc > 1:2023370/1‑93 (MQ=255)
tCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGc > 2:3025268/1‑93 (MQ=255)
tGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCtt > 1:5275013/1‑93 (MQ=255)
gAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTc > 2:5940112/1‑93 (MQ=255)
gAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTc < 1:3203790/93‑1 (MQ=255)
aGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCt < 1:4180144/93‑1 (MQ=255)
ttAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCtat > 2:1943946/1‑93 (MQ=255)
ttAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCtat > 1:4309486/1‑93 (MQ=255)
ttAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCtat > 1:186974/1‑93 (MQ=255)
tAAATTTATATCAGCATACATGGGTCAGGACGATTTTAATCACATATAACATTCGCCCTTTTTCTCACCATCCACTGATCATCGGCTTCtata > 1:4009521/1‑93 (MQ=255)
aaaTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATaa < 1:5484324/93‑1 (MQ=255)
aaaTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATaa < 2:4767757/93‑1 (MQ=255)
aaaTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATaa > 2:6669422/1‑93 (MQ=255)
aaaTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATaa > 2:6338749/1‑93 (MQ=255)
aaaTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATaa < 2:331122/93‑1 (MQ=255)
aaTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAAc < 2:7290938/93‑1 (MQ=255)
aTTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACg > 2:5811125/1‑93 (MQ=255)
tttATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGa < 2:2521120/93‑1 (MQ=255)
ttATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGaa > 2:797022/1‑93 (MQ=255)
tatCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATc > 1:4992256/1‑93 (MQ=255)
tCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGa < 2:7931770/93‑1 (MQ=255)
tCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGa < 2:2223479/93‑1 (MQ=255)
aGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATa > 1:2834702/1‑93 (MQ=255)
aGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATa > 1:2449245/1‑93 (MQ=255)
aGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATa > 1:3305756/1‑93 (MQ=255)
aGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATa > 1:1925638/1‑93 (MQ=255)
aGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATa > 1:1460883/1‑93 (MQ=255)
gCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAc < 2:7455240/93‑1 (MQ=255)
gCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAc < 2:1277522/93‑1 (MQ=255)
aTAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACgg > 2:2777667/1‑93 (MQ=255)
aTAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACgg > 2:6529246/1‑93 (MQ=255)
aTAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACgg > 2:6786348/1‑93 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa > 1:5588656/1‑93 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa < 1:2309700/93‑1 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa < 2:1859663/93‑1 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa < 2:7624739/93‑1 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa > 1:4574027/1‑93 (MQ=255)
aaTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAtt > 2:6938969/1‑93 (MQ=255)
aaTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAtt < 2:6858264/93‑1 (MQ=255)
tGGGTCAGGCCGCTTTTAATCACTTATAAAAACCGCCCTTTTTCTCACAATCAAATAATCATCGGCTTCTATAACGAAATCGATACGGATTAg > 2:1882483/1‑93 (MQ=255)
gggTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgt < 2:7537191/93‑1 (MQ=255)
gggTCAGGACGCTTTTAATCACATATAAAAAGCGACCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgt > 1:1547491/1‑93 (MQ=255)
gggTCAGGACGATTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgt > 1:2760906/1‑93 (MQ=255)
ggTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtg > 2:2676326/1‑93 (MQ=255)
ggTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtg < 1:851971/93‑1 (MQ=255)
gTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgt > 2:5733056/1‑93 (MQ=255)
gTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgt < 1:6668847/93‑1 (MQ=255)
aGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGtt < 2:4483210/93‑1 (MQ=255)
ggACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTa > 2:6990396/1‑93 (MQ=255)
ggACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTa > 1:6808299/1‑93 (MQ=255)
gACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAc > 1:3924690/1‑93 (MQ=255)
aCGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACt > 1:4116034/1‑93 (MQ=255)
gCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCg > 1:1178330/1‑93 (MQ=255)
gCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCg > 2:5554209/1‑93 (MQ=255)
gCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCg > 1:1112451/1‑93 (MQ=255)
gCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCg > 1:3465188/1‑93 (MQ=255)
cTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGt > 1:3374268/1‑93 (MQ=255)
ttttAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTc < 1:6089767/93‑1 (MQ=255)
ttttAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTc > 2:4070555/1‑93 (MQ=255)
ttAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCtt > 1:2616361/1‑93 (MQ=255)
aaTCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCa > 2:1608271/1‑93 (MQ=255)
aTCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCAt < 1:1356339/93‑1 (MQ=255)
tCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATc > 2:2042909/1‑93 (MQ=255)
tCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATc < 2:2357600/93‑1 (MQ=255)
acaTATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCt > 1:437428/1‑93 (MQ=255)
caTATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTc > 1:3636502/1‑93 (MQ=255)
tataAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaa > 2:1209554/1‑93 (MQ=255)
taAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaaaa > 1:2289164/1‑93 (MQ=255)
taAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaaaa > 1:4787141/1‑93 (MQ=255)
taAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaaaa > 1:5427682/1‑93 (MQ=255)
aaacaGCGCCCTTTTTCTCACAATCAAATGATCATCGTCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAc < 1:7381505/93‑1 (MQ=255)
aaaaaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAc > 1:5288769/1‑93 (MQ=255)
aaaaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAcg > 2:6054306/1‑93 (MQ=255)
aaaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAcgc < 1:3093689/93‑1 (MQ=255)
aaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAcgcg > 2:5964466/1‑93 (MQ=255)
aaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAcgcg > 2:517729/1‑93 (MQ=255)
aGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACgcgc < 1:3806114/93‑1 (MQ=255)
aGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACgcgc < 1:7747928/93‑1 (MQ=255)
gcgcCCTTTGTCGCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGcc < 1:6921414/93‑1 (MQ=255)
|
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC > NC_000913/1892424‑1892603
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCACGA > NC_000913/1892421‑1892607
|
ACATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGC > SRR4302543.3824383/1‑94 (MQ=60)
ACATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGC > SRR4302543.8003914/1‑94 (MQ=60)
CATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCC > SRR4302543.1614578/1‑94 (MQ=60)
ATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC > SRR4302543.3047988/1‑94 (MQ=60)
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCT > SRR4302543.4507078/1‑94 (MQ=60)
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCT < SRR4302543.6409846/94‑1 (MQ=60)
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCT < SRR4302543.7825606/94‑1 (MQ=60)
CAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCT < SRR4302543.973639/94‑1 (MQ=60)
AGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTC > SRR4302543.1237823/1‑94 (MQ=60)
AGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTC > SRR4302543.2982899/1‑94 (MQ=60)
AGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGCCGGGGCGCTTTTATTAACATATAAAACACGCCCTTTTTCTC > SRR4302543.1373198/1‑94 (MQ=60)
GGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCA > SRR4302543.7856032/1‑94 (MQ=60)
GGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCA < SRR4302543.455755/94‑1 (MQ=60)
GAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCAC > SRR4302543.959245/1‑94 (MQ=60)
GAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAAT < SRR4302543.598723/94‑1 (MQ=60)
AACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATC < SRR4302543.6682700/94‑1 (MQ=60)
AACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATC < SRR4302543.3176444/94‑1 (MQ=60)
ACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCA < SRR4302543.5388400/94‑1 (MQ=60)
AAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAT < SRR4302543.4262941/94‑1 (MQ=60)
AAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAT > SRR4302543.4136789/1‑94 (MQ=60)
AAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAT > SRR4302543.4136790/1‑94 (MQ=60)
AAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATG > SRR4302543.1971793/1‑94 (MQ=60)
AAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGA < SRR4302543.7366486/94‑1 (MQ=60)
ACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCAT > SRR4302543.4103159/1‑94 (MQ=60)
ACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCAT > SRR4302543.5299555/1‑94 (MQ=60)
CTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAATCGCCCTTTTTCTCACAATCAAATGATCATC > SRR4302543.7874730/1‑94 (MQ=60)
TGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCG > SRR4302543.1767772/1‑94 (MQ=60)
CGGTCTGAGTTAAATTTATATCAGCATAAATTGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCG < SRR4302543.2726440/94‑1 (MQ=60)
GTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGC > SRR4302543.2041556/1‑94 (MQ=60)
CTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTT > SRR4302543.5322604/1‑94 (MQ=60)
GAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCT < SRR4302543.3232692/94‑1 (MQ=60)
AGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTA < SRR4302543.4218022/94‑1 (MQ=60)
GTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTAT > SRR4302543.188563/1‑94 (MQ=60)
GTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTAT > SRR4302543.4348631/1‑94 (MQ=60)
TTAAATTTATATCAGCATACATGGGTCAGGACGATTTTAATCACATATAACATTCGCCCTTTTTCTCACCATCCACTGATCATCGGCTTCTATA > SRR4302543.4045319/1‑94 (MQ=53)
AAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAAC < SRR4302543.5534039/94‑1 (MQ=60)
AAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCGCACAATCAAAGGATCATCGGCTTCTATAAC < SRR4302543.5534040/94‑1 (MQ=60)
AAATTTATATCAGCATAAATGGGTCAGGACGATTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAAC > SRR4302543.4157479/1‑94 (MQ=60)
TTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAA < SRR4302543.6484264/94‑1 (MQ=60)
TTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAA > SRR4302543.7715084/1‑94 (MQ=60)
TATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAAT < SRR4302543.6125240/94‑1 (MQ=60)
ATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATC < SRR4302543.1933346/94‑1 (MQ=60)
ATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATC > SRR4302543.5037699/1‑94 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATA > SRR4302543.1942987/1‑94 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATA < SRR4302543.4352444/94‑1 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATA > SRR4302543.1474055/1‑94 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATA > SRR4302543.2471332/1‑94 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATA > SRR4302543.3335585/1‑94 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATA > SRR4302543.2860627/1‑94 (MQ=60)
AGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAC > SRR4302543.3550853/1‑94 (MQ=60)
AGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAC > SRR4302543.5010812/1‑94 (MQ=60)
GCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACG < SRR4302543.1881265/94‑1 (MQ=60)
CATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGG > SRR4302543.3367782/1‑94 (MQ=60)
CATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGG > SRR4302543.5701949/1‑94 (MQ=60)
ATAAATGGGTCAGGCCGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTTACAATCAAATGATCATCAGCTTCTATAACGAAATCaacacggt > SRR4302543.1536280/1‑86 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGT > SRR4302543.2459057/1‑94 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGA > SRR4302543.4615619/1‑94 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGA > SRR4302543.7381811/1‑94 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGA > SRR4302543.5639569/1‑94 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGA > SRR4302543.684143/1‑94 (MQ=60)
TAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAT < SRR4302543.2330723/94‑1 (MQ=60)
TAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAT > SRR4302543.2314159/1‑94 (MQ=60)
ATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAG > SRR4302543.3146638/1‑94 (MQ=60)
TGGGTCAGGACGCTTTTAATCACATATAAAAAGCGACCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGT > SRR4302543.1561340/1‑94 (MQ=60)
TGGGTCAGGACGATTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGT > SRR4302543.2786026/1‑94 (MQ=60)
GGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTG < SRR4302543.1690739/94‑1 (MQ=60)
GGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGT < SRR4302543.859535/94‑1 (MQ=60)
GTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTG < SRR4302543.6731810/94‑1 (MQ=60)
CAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTT > SRR4302543.2163009/1‑94 (MQ=60)
AGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTA > SRR4302543.6872583/1‑94 (MQ=60)
GGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAT > SRR4302543.3959327/1‑94 (MQ=60)
GGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAC > SRR4302543.5328663/1‑94 (MQ=60)
GGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAC > SRR4302543.3959328/1‑94 (MQ=60)
GACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACT > SRR4302543.4153111/1‑94 (MQ=60)
CGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCG > SRR4302543.1188992/1‑94 (MQ=60)
CGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCG > SRR4302543.3496226/1‑94 (MQ=60)
CGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCG > SRR4302543.1122504/1‑94 (MQ=60)
GCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGT > SRR4302543.3404563/1‑94 (MQ=60)
CTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTC > SRR4302543.3248866/1‑94 (MQ=60)
TTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCT < SRR4302543.6147487/94‑1 (MQ=60)
TTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTT > SRR4302543.2640091/1‑94 (MQ=60)
AATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCAT < SRR4302543.7957603/94‑1 (MQ=60)
AATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGCTACTCGTCTTCAT > SRR4302543.3490035/1‑94 (MQ=60)
ATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATC < SRR4302543.29745/94‑1 (MQ=60)
ATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATC < SRR4302543.1368471/94‑1 (MQ=60)
TCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCC > SRR4302543.5513277/1‑94 (MQ=60)
CACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCT < SRR4302543.2544800/94‑1 (MQ=60)
CACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCT > SRR4302543.441526/1‑94 (MQ=60)
CACATATAAAAAGCGCCCTTTTGCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCT < SRR4302543.3719758/94‑1 (MQ=60)
ACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTC < SRR4302543.2817977/94‑1 (MQ=60)
ACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTC > SRR4302543.321593/1‑94 (MQ=60)
ACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTC > SRR4302543.3668502/1‑94 (MQ=60)
CATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCA > SRR4302543.445597/1‑94 (MQ=60)
ATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAA < SRR4302543.6365447/94‑1 (MQ=60)
ATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAA > SRR4302543.2310063/1‑94 (MQ=60)
ATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAA > SRR4302543.5477006/1‑94 (MQ=60)
ATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAA > SRR4302543.4830898/1‑94 (MQ=60)
TAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAC > SRR4302543.5336513/1‑94 (MQ=60)
TAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAC < SRR4302543.425846/94‑1 (MQ=60)
AAACAGCGCCCTTTTTCTCACAATCAAATGATCATCGTCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACG < SRR4302543.7452448/94‑1 (MQ=60)
AAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGC > SRR4302543.4657014/1‑94 (MQ=60)
AAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGC > SRR4302543.3972998/1‑94 (MQ=60)
AAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCG > SRR4302543.1146724/1‑94 (MQ=60)
AAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCG < SRR4302543.3121517/94‑1 (MQ=60)
AGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC > SRR4302543.2873316/1‑94 (MQ=60)
AGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC < SRR4302543.7821098/94‑1 (MQ=60)
AGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC < SRR4302543.7821099/94‑1 (MQ=60)
AGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC < SRR4302543.3839660/94‑1 (MQ=60)
GCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCA < SRR4302543.6986488/94‑1 (MQ=60)
GCGCCCTTTGTCGCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCA < SRR4302543.6986489/94‑1 (MQ=60)
CGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAATCGTCTTCATCCTCAAAACGCGCCAC > SRR4302543.4744237/1‑94 (MQ=60)
GCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCACG > SRR4302543.6680838/1‑94 (MQ=60)
GCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCACG > SRR4302543.2513348/1‑94 (MQ=60)
GCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCACG > SRR4302543.6680837/1‑94 (MQ=60)
GCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCACG > SRR4302543.1755621/1‑94 (MQ=60)
GCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCACG > SRR4302543.4141127/1‑94 (MQ=60)
CCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCACGA < SRR4302543.7360040/94‑1 (MQ=60)
|
ACATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCACGA > NC_000913/1892421‑1892607
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
