Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,923,720 |
T→C |
V86A (GTT→GCT) |
b1843 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,923,720 | 0 | T | C | 99.5%
| 693.7
/ NA
| 219 | V86A (GTT→GCT) | b1843 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (110/108); minor base A (1/0); total (111/108) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 222 total aligned reads displayed.
CCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCAT > NC_000913/1923630‑1923809
|
cccTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTg < 1:1348307/93‑1 (MQ=255)
cccTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTg > 1:5303910/1‑93 (MQ=255)
ccTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGa > 1:7869314/1‑93 (MQ=255)
ccTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGa < 1:6533416/93‑1 (MQ=255)
cTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGaa < 2:247084/93‑1 (MQ=255)
ttCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAat > 1:7441645/1‑93 (MQ=255)
ttCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAat > 1:1949347/1‑93 (MQ=255)
tCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAata > 1:2460555/1‑93 (MQ=255)
ccTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAatat > 1:1116920/1‑93 (MQ=255)
cccACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGa > 2:4052616/1‑93 (MQ=255)
ccACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGAt < 1:6507642/93‑1 (MQ=255)
cACCCGGTCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATc < 1:1304982/93‑1 (MQ=255)
cccGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGc < 2:1761615/93‑1 (MQ=255)
cGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACTATCGCtt > 1:6991774/1‑93 (MQ=255)
cGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCtt > 2:2178280/1‑93 (MQ=255)
aTCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTa > 2:7127437/1‑93 (MQ=255)
tctctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTAt > 2:6137045/1‑93 (MQ=255)
tctctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCGTCCCGCTGAATATAACGATCCCTTTAt > 2:4045818/1‑93 (MQ=255)
ctctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTAtt < 2:4187671/93‑1 (MQ=255)
ctctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTAtt < 1:3130365/93‑1 (MQ=255)
tctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTc > 1:576489/1‑93 (MQ=255)
tctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTGCCCGCTGAATATAACGATCGCTTTATTc < 1:277201/93‑1 (MQ=255)
ctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCg < 1:769854/93‑1 (MQ=255)
tcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGt > 2:4941709/1‑93 (MQ=255)
aCTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTgg < 2:3613782/93‑1 (MQ=255)
aCTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTgg < 2:722514/93‑1 (MQ=255)
cTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGTCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGa > 2:5999450/1‑93 (MQ=255)
cTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGa > 2:6328766/1‑93 (MQ=255)
cTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGa > 2:5241113/1‑93 (MQ=255)
cTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGa < 2:2371715/93‑1 (MQ=255)
tGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGaa < 2:5778359/93‑1 (MQ=255)
tGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGaa < 1:6631929/93‑1 (MQ=255)
tGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGaa < 1:1011870/93‑1 (MQ=255)
tGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGaa > 1:5819262/1‑93 (MQ=255)
tGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGaa > 2:3000822/1‑93 (MQ=255)
gTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAAt > 2:5948394/1‑93 (MQ=255)
gTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAAt < 2:1977836/93‑1 (MQ=255)
ttAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAAtt < 2:5450304/93‑1 (MQ=255)
tAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTg > 2:7683084/1‑93 (MQ=255)
cccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt < 2:3124235/93‑1 (MQ=255)
cccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt < 2:2293180/93‑1 (MQ=255)
cccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt < 1:6010061/93‑1 (MQ=255)
cccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt > 1:7148140/1‑93 (MQ=255)
cccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt > 1:7265327/1‑93 (MQ=255)
cccGCTTTGTTATGCCGCAACGAACTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt < 2:4343890/93‑1 (MQ=255)
ccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgtg > 2:6811418/1‑93 (MQ=255)
gCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGtt > 1:7578244/1‑93 (MQ=255)
tttGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCg > 1:3802442/1‑93 (MQ=255)
tttGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCg > 2:3913317/1‑93 (MQ=255)
ttggTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCg < 1:887515/90‑1 (MQ=255)
tGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCa < 2:3425774/93‑1 (MQ=255)
gTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCAc > 1:2063424/1‑93 (MQ=255)
gTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCAc < 2:1180285/93‑1 (MQ=255)
gTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCAc < 2:5098729/93‑1 (MQ=255)
aTGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGt < 2:638140/93‑1 (MQ=255)
tGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTg < 2:5601117/93‑1 (MQ=255)
tGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTg > 1:4680997/1‑93 (MQ=255)
gCCGCAACGACCTGGCGAATGACCATCATTGCCGTCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTgg < 2:7895754/93‑1 (MQ=255)
cAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaa > 2:1600381/1‑93 (MQ=255)
cAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaa > 2:4559985/1‑93 (MQ=255)
aCGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaaaa < 1:4813098/93‑1 (MQ=255)
aCGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaaaa > 1:944882/1‑93 (MQ=255)
cGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaaaaa > 2:786610/1‑93 (MQ=255)
cGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaaaaa < 1:387253/93‑1 (MQ=255)
cTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGTATTGCGGTGTTCGCACCGTGGCGAAAAACGcc > 1:1908829/1‑93 (MQ=255)
cTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGcc > 2:1233279/1‑93 (MQ=255)
tGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCt > 2:6268091/1‑93 (MQ=255)
tGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCt < 1:2227485/93‑1 (MQ=255)
tGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCt < 2:5208761/93‑1 (MQ=255)
cggCGAATGACCATCTGTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTTGCCAAAAACGCCt < 2:2420032/92‑1 (MQ=255)
ggCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTg < 2:4915890/93‑1 (MQ=255)
ggCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTg > 2:6905574/1‑93 (MQ=255)
ggCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTg < 1:4204880/93‑1 (MQ=255)
ggCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTg < 2:3951873/93‑1 (MQ=255)
gAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGa < 1:547737/93‑1 (MQ=255)
aaTGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGAt > 1:3686955/1‑93 (MQ=255)
aaTGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGAt > 1:819341/1‑93 (MQ=255)
aaTGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGAt > 1:5149893/1‑93 (MQ=255)
tGACCATCATTGCCGGCCTTCCCGATGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAACCGCCTGGGATcc > 2:6899214/1‑92 (MQ=255)
gACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTa > 2:5462288/1‑93 (MQ=255)
aCCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTAc < 2:7816462/93‑1 (MQ=255)
cctcatTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCa < 1:1538008/91‑1 (MQ=255)
catcatTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCa < 2:1693817/93‑1 (MQ=255)
catcatTACCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCa < 1:7656617/93‑1 (MQ=255)
tcatTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATc > 2:7476114/1‑93 (MQ=255)
catTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCa > 1:6460332/1‑93 (MQ=255)
ttGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCaga < 2:2669367/93‑1 (MQ=255)
tGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCagag > 1:2323082/1‑93 (MQ=255)
tccGGCCTGCCCGCTGAATATAACGATCGCTTTATTCGTGGAATGGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGt < 2:4741702/92‑1 (MQ=255)
cGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCa < 2:3584809/93‑1 (MQ=255)
ggCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCAt > 1:7388619/1‑93 (MQ=255)
gCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATg < 2:6960902/93‑1 (MQ=255)
ccTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATgg < 1:3227957/93‑1 (MQ=255)
ccTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATgg < 2:5846195/93‑1 (MQ=255)
ccTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATgg > 1:4840015/1‑93 (MQ=255)
ttCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTg > 1:7615762/1‑93 (MQ=255)
ttCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTg > 1:4514979/1‑93 (MQ=255)
tCCCGCTGAATATAACGATCGCTTTATTCGTGGGATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATAGTGc > 2:7124991/1‑93 (MQ=255)
cccGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCa < 2:7306461/93‑1 (MQ=255)
cccGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCa < 2:284606/93‑1 (MQ=255)
|
CCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCAT > NC_000913/1923630‑1923809
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCATGTCT > NC_000913/1923627‑1923813
|
GTGCCCTTCCTGCCCCCCCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGC < SRR4302543.1319156/94‑1 (MQ=60)
TGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCT < SRR4302543.6649672/94‑1 (MQ=60)
TGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCT < SRR4302543.5793921/94‑1 (MQ=60)
GCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTG > SRR4302543.5351797/1‑94 (MQ=60)
GCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTG > SRR4302543.5351798/1‑94 (MQ=60)
CCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGA < SRR4302543.1360362/94‑1 (MQ=60)
CCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGA > SRR4302543.7943411/1‑94 (MQ=60)
CCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAA < SRR4302543.6594924/94‑1 (MQ=60)
CTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGTCCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAAT > SRR4302543.3782576/1‑94 (MQ=60)
CTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAAT > SRR4302543.7500931/1‑94 (MQ=60)
CTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAAT > SRR4302543.7512969/1‑94 (MQ=60)
CTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAAT > SRR4302543.1966834/1‑94 (MQ=60)
TTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATA > SRR4302543.2482736/1‑94 (MQ=60)
TCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATAT > SRR4302543.1127033/1‑94 (MQ=60)
CTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAA < SRR4302543.6690275/94‑1 (MQ=60)
TGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAAC < SRR4302543.7789544/94‑1 (MQ=60)
CGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAAC < SRR4302543.5313932/94‑1 (MQ=60)
GCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACG > SRR4302543.1729835/1‑94 (MQ=60)
CCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATC < SRR4302543.6568944/94‑1 (MQ=60)
CACCCGGTCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCG < SRR4302543.1316571/94‑1 (MQ=60)
ACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGC > SRR4302543.7764430/1‑94 (MQ=60)
CCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCT > SRR4302543.7923322/1‑94 (MQ=60)
CCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACTATCGCTT > SRR4302543.7057575/1‑94 (MQ=60)
CGATGTCTCACTGTTAGACCCGCTTTGTTATGACGCAAATACCTGGCGAATGACCATCATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTT < SRR4302543.6072408/94‑1 (MQ=60)
CGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTT < SRR4302543.6072409/94‑1 (MQ=60)
TCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATT > SRR4302543.3301436/1‑94 (MQ=60)
CTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTC > SRR4302543.581757/1‑94 (MQ=60)
CTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTC < SRR4302543.3158521/94‑1 (MQ=60)
TCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCG < SRR4302543.268719/94‑1 (MQ=60)
TCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCG < SRR4302543.279652/94‑1 (MQ=60)
TCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCG < SRR4302543.1825575/94‑1 (MQ=60)
TCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTGCCCGCTGAATATAACGATCGCTTTATTCG < SRR4302543.279651/94‑1 (MQ=60)
CTCACTTTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGT < SRR4302543.2424548/94‑1 (MQ=60)
CTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGT < SRR4302543.776610/94‑1 (MQ=60)
CTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGT > SRR4302543.4290224/1‑94 (MQ=60)
CACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGG < SRR4302543.231455/94‑1 (MQ=60)
CACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGG > SRR4302543.3844717/1‑94 (MQ=60)
CTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAA > SRR4302543.5872175/1‑94 (MQ=60)
TGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAAT < SRR4302543.1020820/94‑1 (MQ=60)
TGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAAT < SRR4302543.6694504/94‑1 (MQ=60)
GTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATT < SRR4302543.3991217/94‑1 (MQ=60)
TTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTG < SRR4302543.6756000/94‑1 (MQ=60)
TAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGC > SRR4302543.1315860/1‑94 (MQ=60)
AGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGGATTGCG > SRR4302543.3218681/1‑94 (MQ=60)
ACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGT > SRR4302543.7217620/1‑94 (MQ=60)
ACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGT > SRR4302543.7335522/1‑94 (MQ=60)
ACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGT < SRR4302543.6528323/94‑1 (MQ=60)
CCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTG < SRR4302543.6065480/94‑1 (MQ=60)
CCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTG < SRR4302543.213587/94‑1 (MQ=60)
CGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTT > SRR4302543.7650302/1‑94 (MQ=60)
CGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTT > SRR4302543.7650304/1‑94 (MQ=60)
CTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCG > SRR4302543.3835946/1‑94 (MQ=60)
TTGGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGC < SRR4302543.895374/94‑1 (MQ=60)
TGTTATGCCGCAACGCCCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCAC < SRR4302543.52068/94‑1 (MQ=60)
TGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCAC > SRR4302543.4635210/1‑94 (MQ=60)
TGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCAC > SRR4302543.2081879/1‑94 (MQ=60)
GTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACC < SRR4302543.5853117/94‑1 (MQ=60)
TATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGT > SRR4302543.7692322/1‑94 (MQ=60)
ATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTG > SRR4302543.4723682/1‑94 (MQ=60)
GCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGC < SRR4302543.5636993/94‑1 (MQ=60)
GCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGC > SRR4302543.826727/1‑94 (MQ=60)
AACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAA > SRR4302543.7661252/1‑94 (MQ=60)
AACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAA > SRR4302543.953142/1‑94 (MQ=60)
ACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAA < SRR4302543.4857050/94‑1 (MQ=60)
CGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAAC < SRR4302543.1100525/94‑1 (MQ=60)
CGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAAC < SRR4302543.390836/94‑1 (MQ=60)
CGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAAC > SRR4302543.719281/1‑94 (MQ=60)
GACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACG > SRR4302543.3626193/1‑94 (MQ=60)
GACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACG < SRR4302543.1321482/94‑1 (MQ=60)
CCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGTATTGCGGTGTTCGCACCGTGGCGAAAAACGCC > SRR4302543.1926025/1‑94 (MQ=60)
CTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCT < SRR4302543.815244/94‑1 (MQ=60)
CTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCT < SRR4302543.7381150/94‑1 (MQ=60)
TGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTG < SRR4302543.4883809/94‑1 (MQ=60)
TGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTG < SRR4302543.2247600/94‑1 (MQ=60)
TGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTG < SRR4302543.7533268/94‑1 (MQ=60)
TGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTG < SRR4302543.4789320/94‑1 (MQ=60)
GGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGG < SRR4302543.4243009/94‑1 (MQ=60)
GGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGG < SRR4302543.7330434/94‑1 (MQ=60)
CGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGA > SRR4302543.1927268/1‑94 (MQ=60)
GAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGAT > SRR4302543.826553/1‑94 (MQ=60)
GAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGAT > SRR4302543.5196441/1‑94 (MQ=60)
GAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGAT > SRR4302543.3719349/1‑94 (MQ=60)
GAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGAT < SRR4302543.552788/94‑1 (MQ=60)
AATGACCATCATTGCGGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATC < SRR4302543.6704797/94‑1 (MQ=60)
GACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTAC > SRR4302543.5109950/1‑94 (MQ=60)
CCTCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCAT < SRR4302543.1551784/94‑1 (MQ=60)
CATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCAT > SRR4302543.626097/1‑94 (MQ=60)
CATCATTACCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCAT < SRR4302543.7729200/94‑1 (MQ=60)
TCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCA > SRR4302543.6521202/1‑94 (MQ=60)
CATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAG < SRR4302543.4669399/94‑1 (MQ=60)
CATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAG < SRR4302543.2031718/94‑1 (MQ=60)
TTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAG > SRR4302543.2344193/1‑94 (MQ=60)
TTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAG < SRR4302543.925534/94‑1 (MQ=60)
CGGCCTTCCCGCTGAATATAACGGTCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCAT < SRR4302543.5939348/94‑1 (MQ=60)
CGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCAT > SRR4302543.7459605/1‑94 (MQ=60)
GCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGG > SRR4302543.4884151/1‑94 (MQ=60)
CCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGT < SRR4302543.3257143/94‑1 (MQ=60)
CTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTG > SRR4302543.7688060/1‑94 (MQ=60)
CTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTG > SRR4302543.4556044/1‑94 (MQ=60)
TCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCA > SRR4302543.2420061/1‑94 (MQ=60)
CCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCAT > SRR4302543.6592324/1‑94 (MQ=60)
CCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGTTGAATG > SRR4302543.6859105/1‑94 (MQ=60)
CCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCATG < SRR4302543.136840/94‑1 (MQ=60)
CCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCATG > SRR4302543.6015095/1‑94 (MQ=60)
CGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCATGT > SRR4302543.7664133/1‑94 (MQ=60)
CTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCATGTCT > SRR4302543.3557393/1‑94 (MQ=60)
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GTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCATGTCT > NC_000913/1923627‑1923813
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
