Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,950,024 |
T→C |
G202G (GGT→GGC) |
yecE → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,950,024 | 0 | T | C | 99.1%
| 668.1
/ ‑4.0
| 214 | G202G (GGT→GGC) | yecE | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (99/113); total (100/114) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 217 total aligned reads displayed.
TGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGTAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTT > NC_000913/1949934‑1950113
|
tGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAg > 1:7547631/1‑93 (MQ=255)
gAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGt < 2:4263492/93‑1 (MQ=255)
aaGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGtg < 1:3114551/93‑1 (MQ=255)
aGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGATGGCGACAAATCCGCTGATCCGTTTTATCGGCAGtga < 1:2499556/93‑1 (MQ=255)
aGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGtga < 2:2070012/93‑1 (MQ=255)
gCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGtgat > 2:4503002/1‑93 (MQ=255)
gCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGtgat > 2:6627632/1‑93 (MQ=255)
cTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGtgatg > 2:2157502/1‑93 (MQ=255)
tATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGtgatga > 2:3448791/1‑93 (MQ=255)
tATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGtgatga < 2:3244467/93‑1 (MQ=255)
ttCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGata < 2:147370/93‑1 (MQ=255)
tCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGatat > 2:4115903/1‑93 (MQ=255)
gcgACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGa > 2:7712546/1‑93 (MQ=255)
cgACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGAc < 2:33686/93‑1 (MQ=255)
gACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACg > 1:6546661/1‑93 (MQ=255)
gACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACg < 2:4544529/93‑1 (MQ=255)
aCGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGc > 1:7318932/1‑93 (MQ=255)
aCGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGc < 1:1333382/93‑1 (MQ=255)
aCGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGc > 2:4999738/1‑93 (MQ=255)
cTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCaaa > 1:1146741/1‑93 (MQ=255)
tCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCaaaa > 2:3692971/1‑93 (MQ=255)
cAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAAc < 2:7445299/93‑1 (MQ=255)
cAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAAc < 1:3755834/93‑1 (MQ=255)
cAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAAc > 2:6953999/1‑93 (MQ=255)
aaCGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAAcc > 2:7080260/1‑93 (MQ=255)
aaCGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAAcc > 1:4826308/1‑93 (MQ=255)
aCGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCg > 1:6969853/1‑93 (MQ=255)
aCGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCg > 1:24179/1‑93 (MQ=255)
aaaaaaCCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGaa > 2:4441427/1‑93 (MQ=255)
aaaaCCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAatt > 1:4385109/1‑93 (MQ=255)
aaaCCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAatta < 1:7494404/93‑1 (MQ=255)
aaaCCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAatta < 1:6408813/93‑1 (MQ=255)
aaCCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAattat < 2:2783605/93‑1 (MQ=255)
aaCCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAattat > 1:2164053/1‑93 (MQ=255)
ccTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTAttt > 1:3490286/1‑93 (MQ=255)
ccTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTAttt < 2:1832042/93‑1 (MQ=255)
ccTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTAttt < 1:965853/93‑1 (MQ=255)
cTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGTTCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTc < 2:6670978/93‑1 (MQ=255)
cTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTc < 2:7765048/93‑1 (MQ=255)
cTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTc < 2:2930181/93‑1 (MQ=255)
tAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCa > 1:942914/1‑93 (MQ=255)
tAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCa > 1:3212891/1‑93 (MQ=255)
caaaGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCa < 1:1891653/92‑1 (MQ=255)
aaaGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAg < 2:5977978/93‑1 (MQ=255)
aGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGt > 2:1829325/1‑93 (MQ=255)
ttCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCt > 2:4936705/1‑93 (MQ=255)
tCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTg > 1:707103/1‑93 (MQ=255)
tCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTg > 1:1909215/1‑93 (MQ=255)
tCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTg < 1:1918164/93‑1 (MQ=255)
ccGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTgg < 2:608132/93‑1 (MQ=255)
ccGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTgg < 2:824730/93‑1 (MQ=255)
ggTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGtt < 2:4816781/93‑1 (MQ=255)
ggTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGtt < 1:4225619/93‑1 (MQ=255)
gTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTa < 2:6273703/93‑1 (MQ=255)
tACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTAc > 1:6634854/1‑93 (MQ=255)
tACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTAc < 2:3732576/93‑1 (MQ=255)
aCATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACa < 2:2436112/93‑1 (MQ=255)
cATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACaa > 1:3032907/1‑93 (MQ=255)
aTGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTAATGATGTGACGCAAAACCGGGAATTATTTAAGGACTGTTTACaca > 1:2648330/1‑91 (MQ=255)
tGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACaaaa > 1:6265926/1‑93 (MQ=255)
tGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACaaaa > 2:6661009/1‑93 (MQ=255)
gCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACaaaaa < 2:7225135/93‑1 (MQ=255)
cTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAAt > 2:4360613/1‑93 (MQ=255)
gTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTa < 2:5652542/93‑1 (MQ=255)
tGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAgcgc > 1:1032159/1‑93 (MQ=255)
tGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAgcgc > 1:148551/1‑93 (MQ=255)
gACGGCGACAAATCTGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCa < 1:1201741/93‑1 (MQ=255)
aCGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAg < 1:2133226/93‑1 (MQ=255)
gCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTgg > 2:6404708/1‑93 (MQ=255)
gACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCa < 2:7614312/93‑1 (MQ=255)
gACAAATCCGCTGATCCGCTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATCTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCa < 1:4505587/93‑1 (MQ=255)
aCAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCAt < 1:1660433/93‑1 (MQ=255)
aaaTCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCa < 2:2292018/93‑1 (MQ=255)
aTCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGa < 1:2503886/93‑1 (MQ=255)
aTCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGa > 2:1994198/1‑93 (MQ=255)
tCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGAc > 2:5522129/1‑93 (MQ=255)
tCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGAc < 2:1030180/93‑1 (MQ=255)
ccGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGAcc > 1:3680299/1‑93 (MQ=255)
cGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCa > 1:3539656/1‑93 (MQ=255)
cTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACt > 1:5401221/1‑93 (MQ=255)
tGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTa < 1:2932460/93‑1 (MQ=255)
tGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTa < 2:2515338/93‑1 (MQ=255)
tGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTa < 1:1581052/93‑1 (MQ=255)
tGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTa < 2:2666404/93‑1 (MQ=255)
tGATCCGTTGTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTa < 1:1873712/93‑1 (MQ=255)
gATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTAc > 2:706221/1‑93 (MQ=255)
gATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTAc < 1:5719366/93‑1 (MQ=255)
tCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGc > 1:5095812/1‑93 (MQ=255)
tCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGc < 1:1252844/93‑1 (MQ=255)
ccGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGcc > 1:4685812/1‑93 (MQ=255)
cGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCt < 2:317881/93‑1 (MQ=255)
gTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCtt > 1:3975667/1‑93 (MQ=255)
gTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCtt > 1:3300147/1‑93 (MQ=255)
gTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCtt > 1:761572/1‑93 (MQ=255)
ttttATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTa > 2:5137403/1‑93 (MQ=255)
ttttATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTa < 2:7285926/93‑1 (MQ=255)
ttttATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTa < 2:1088951/93‑1 (MQ=255)
cGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCtttt < 1:1841222/93‑1 (MQ=255)
cGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCtttt < 2:2144791/93‑1 (MQ=255)
cGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTAAGCCTTATCtttt < 1:4831136/93‑1 (MQ=255)
|
TGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGTAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTT > NC_000913/1949934‑1950113
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGTGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGTAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTTTTA > NC_000913/1949931‑1950117
|
CAGTGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTGCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGC < SRR4302543.408127/94‑1 (MQ=60)
GTGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAG < SRR4302543.6033448/94‑1 (MQ=60)
GTGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAG < SRR4302543.7051349/94‑1 (MQ=60)
GTGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAG > SRR4302543.7619531/1‑94 (MQ=60)
GTGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAG > SRR4302543.7619532/1‑94 (MQ=60)
TGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGT > SRR4302543.3083609/1‑94 (MQ=60)
GAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTG < SRR4302543.999023/94‑1 (MQ=60)
GAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTG > SRR4302543.1190608/1‑94 (MQ=60)
AAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGA < SRR4302543.3142564/94‑1 (MQ=60)
AGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGATGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGAT < SRR4302543.2522240/94‑1 (MQ=60)
AGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGAT < SRR4302543.2522241/94‑1 (MQ=60)
ATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATA > SRR4302543.3896203/1‑94 (MQ=60)
TTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATAT < SRR4302543.1554262/94‑1 (MQ=60)
CGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGGTATGA > SRR4302543.179646/1‑94 (MQ=60)
CGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGA < SRR4302543.5089173/94‑1 (MQ=60)
GCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGAC < SRR4302543.7841161/94‑1 (MQ=60)
CGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACG > SRR4302543.6608280/1‑94 (MQ=60)
GACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGC > SRR4302543.7389436/1‑94 (MQ=60)
GACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGC > SRR4302543.7895835/1‑94 (MQ=60)
GACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGC < SRR4302543.672444/94‑1 (MQ=60)
ACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCA < SRR4302543.1345266/94‑1 (MQ=60)
CGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAA > SRR4302543.5825232/1‑94 (MQ=60)
GCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAA > SRR4302543.1157191/1‑94 (MQ=60)
GCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAA > SRR4302543.1611816/1‑94 (MQ=60)
GCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAA > SRR4302543.4872074/1‑94 (MQ=60)
CAACGAAAAAACCCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAACTCCGCTGAGCCGTTTTATCGGCAGTGATGATATGACGCAAAACC < SRR4302543.3003953/94‑1 (MQ=60)
CAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACC < SRR4302543.4361545/94‑1 (MQ=60)
CAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACC > SRR4302543.4870351/1‑94 (MQ=60)
CAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACC < SRR4302543.3788877/94‑1 (MQ=60)
CAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACC < SRR4302543.3788876/94‑1 (MQ=60)
AACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCG > SRR4302543.24397/1‑94 (MQ=60)
AACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCG > SRR4302543.7035440/1‑94 (MQ=60)
CGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGG > SRR4302543.5526606/1‑94 (MQ=60)
GAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGA > SRR4302543.1901710/1‑94 (MQ=60)
AAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAA > SRR4302543.5396632/1‑94 (MQ=60)
AAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAAT < SRR4302543.1934263/94‑1 (MQ=60)
AAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATT > SRR4302543.4424868/1‑94 (MQ=60)
AAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATT > SRR4302543.1148105/1‑94 (MQ=60)
AAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTAT > SRR4302543.2634086/1‑94 (MQ=60)
AAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTAT < SRR4302543.6469170/94‑1 (MQ=60)
AAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTAT > SRR4302543.2183445/1‑94 (MQ=60)
AAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTAT < SRR4302543.7566089/94‑1 (MQ=60)
AAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTAT < SRR4302543.7566090/94‑1 (MQ=60)
AAACCTAAACTTCCGGTACATGCTGTCGTGACGGCGACAAACTCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTAT < SRR4302543.6469172/94‑1 (MQ=60)
AACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATT > SRR4302543.352499/1‑94 (MQ=60)
ACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTT > SRR4302543.3521529/1‑94 (MQ=60)
CCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTC < SRR4302543.974333/94‑1 (MQ=60)
CTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCA > SRR4302543.951152/1‑94 (MQ=60)
CTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCA > SRR4302543.3241904/1‑94 (MQ=60)
CTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCA < SRR4302543.4335858/94‑1 (MQ=60)
TAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAG < SRR4302543.2622166/94‑1 (MQ=60)
CAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAG < SRR4302543.1908663/94‑1 (MQ=60)
CAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAG < SRR4302543.1908662/94‑1 (MQ=60)
AAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGG < SRR4302543.3289093/94‑1 (MQ=60)
AGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTC < SRR4302543.1928795/94‑1 (MQ=60)
AGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTC < SRR4302543.2154444/94‑1 (MQ=60)
TTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTG > SRR4302543.1926419/1‑94 (MQ=60)
TTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTG > SRR4302543.713537/1‑94 (MQ=60)
TCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGG < SRR4302543.1935458/94‑1 (MQ=60)
CGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTT > SRR4302543.2875153/1‑94 (MQ=60)
GGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTA < SRR4302543.4263939/94‑1 (MQ=60)
GTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTAC > SRR4302543.6697462/1‑94 (MQ=60)
GTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTAC > SRR4302543.4229043/1‑94 (MQ=60)
GTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTAC > SRR4302543.2069150/1‑94 (MQ=60)
GTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTAC > SRR4302543.6697461/1‑94 (MQ=60)
ACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAA > SRR4302543.2372891/1‑94 (MQ=60)
ACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAA > SRR4302543.3060290/1‑94 (MQ=60)
CATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTAATGATGTGACGCAAAACCGGGAATTATTTAAGGACTGTTTACACA > SRR4302543.2672333/1‑94 (MQ=60)
ATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAA > SRR4302543.6325006/1‑94 (MQ=60)
TGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAA > SRR4302543.246832/1‑94 (MQ=60)
GTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAG < SRR4302543.1406776/94‑1 (MQ=60)
GTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGATTACAAAAATTAG < SRR4302543.1231636/94‑1 (MQ=60)
ACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCG < SRR4302543.4517229/94‑1 (MQ=60)
CTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGC > SRR4302543.1041324/1‑94 (MQ=60)
CTGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGC > SRR4302543.149840/1‑94 (MQ=60)
TGACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCA < SRR4302543.7110935/94‑1 (MQ=60)
GACGGCGACAAATCTGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAG < SRR4302543.1212561/94‑1 (MQ=60)
ACGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGT < SRR4302543.2152324/94‑1 (MQ=60)
CGGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTG > SRR4302543.732617/1‑94 (MQ=60)
GGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGG < SRR4302543.525454/94‑1 (MQ=60)
GGCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGG < SRR4302543.1560017/94‑1 (MQ=60)
GCGACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGC > SRR4302543.6967383/1‑94 (MQ=60)
GACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCAT < SRR4302543.4546555/94‑1 (MQ=60)
GACAAATCCGCTGATCCGCTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATCTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCAT < SRR4302543.4546554/94‑1 (MQ=60)
ACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATC < SRR4302543.1675308/94‑1 (MQ=60)
ACAAATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAAATAGCGCAGTGGCATC > SRR4302543.6463205/1‑94 (MQ=60)
ATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGAC > SRR4302543.95933/1‑94 (MQ=60)
ATCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGAC < SRR4302543.2526619/94‑1 (MQ=60)
TCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACC < SRR4302543.3163529/94‑1 (MQ=60)
TCCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACC > SRR4302543.3712634/1‑94 (MQ=60)
CCGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCA > SRR4302543.3571120/1‑94 (MQ=60)
CGCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCAC < SRR4302543.3516395/94‑1 (MQ=60)
GCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACT < SRR4302543.7490795/94‑1 (MQ=60)
GCTGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACT > SRR4302543.5450329/1‑94 (MQ=60)
TGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTAC < SRR4302543.1595159/94‑1 (MQ=60)
TGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTAC < SRR4302543.2959089/94‑1 (MQ=60)
TGATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTAC > SRR4302543.4761939/1‑94 (MQ=60)
TGATCCGTTGTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTAC < SRR4302543.1890543/94‑1 (MQ=60)
GATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACG < SRR4302543.5771554/94‑1 (MQ=60)
GATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACG < SRR4302543.3367153/94‑1 (MQ=60)
ATCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGC > SRR4302543.5141962/1‑94 (MQ=60)
TCCGTTTTATCGGCAGTGATGATATGTCGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGCGGCATCAGACCACTACGCC > SRR4302543.357572/1‑94 (MQ=60)
TCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCC < SRR4302543.1264078/94‑1 (MQ=60)
TCCGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCC > SRR4302543.4728564/1‑94 (MQ=60)
CGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTT > SRR4302543.3329928/1‑94 (MQ=60)
CGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTT > SRR4302543.4010914/1‑94 (MQ=60)
CGTTTTATCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTT > SRR4302543.768288/1‑94 (MQ=60)
TCGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTT < SRR4302543.1304908/94‑1 (MQ=60)
CGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTT < SRR4302543.1857785/94‑1 (MQ=60)
CGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTT < SRR4302543.1857786/94‑1 (MQ=60)
CGGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTAAGCCTTATCTTTTT < SRR4302543.4875207/94‑1 (MQ=60)
GGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTTT < SRR4302543.7152255/94‑1 (MQ=60)
GGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTTT < SRR4302543.1178178/94‑1 (MQ=60)
GGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTTT > SRR4302543.2719105/1‑94 (MQ=60)
GGCAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTTT > SRR4302543.2719103/1‑94 (MQ=60)
CAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTTTTA > SRR4302543.523616/1‑94 (MQ=60)
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CAGTGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGTAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTTTTA > NC_000913/1949931‑1950117
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
