Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,010,514 |
T→C |
intergenic (‑141/‑10) |
yedM ← / → b1936 |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,010,514 | 0 | T | C | 99.6%
| 725.8
/ NA
| 230 | intergenic (‑141/‑10) | yedM/b1936 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (122/107); total (123/107) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 233 total aligned reads displayed.
ATAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACTGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATC > NC_000913/2010425‑2010603
|
tAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTg > 2:2626100/1‑93 (MQ=255)
tAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTg < 1:2271306/93‑1 (MQ=255)
aaaaTTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGc < 2:7856135/93‑1 (MQ=255)
aaaaTTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGc < 2:4527456/93‑1 (MQ=255)
aaaaTTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGc < 2:3770532/93‑1 (MQ=255)
aaaaTTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGc > 1:532128/1‑93 (MQ=255)
aTTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTc < 2:4680905/93‑1 (MQ=255)
aTTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTc > 1:6078382/1‑93 (MQ=255)
aTTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTc < 1:2212185/93‑1 (MQ=255)
aCCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCtgt < 1:5359357/93‑1 (MQ=255)
aCCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCtgt < 1:4822285/93‑1 (MQ=255)
ccACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCtgtg < 1:287657/93‑1 (MQ=255)
ccACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCtgtg < 1:3002393/93‑1 (MQ=255)
aCTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGt > 2:5062058/1‑93 (MQ=255)
aCTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGt > 2:675053/1‑93 (MQ=255)
aCTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGt < 1:7519551/93‑1 (MQ=255)
cAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTaa > 2:5504980/1‑93 (MQ=255)
aaaaaTCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTaac > 1:1148916/1‑93 (MQ=255)
aaaTCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTaacaa < 2:5975931/93‑1 (MQ=255)
aTCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAacaaca > 1:1045609/1‑93 (MQ=255)
aTCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAacaaca < 1:5099816/93‑1 (MQ=255)
cGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATc > 2:2082142/1‑93 (MQ=255)
cGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATc < 1:175529/93‑1 (MQ=255)
cGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATc < 1:4386198/93‑1 (MQ=255)
cGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATc < 2:4387575/93‑1 (MQ=255)
cGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATc > 2:7214714/1‑93 (MQ=255)
gcacATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATcc < 1:3042260/90‑1 (MQ=255)
cTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCg < 1:7026916/93‑1 (MQ=255)
tCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGa > 1:4639174/1‑93 (MQ=255)
cATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGTTCGTAACAACATCCGAc < 2:7759802/93‑1 (MQ=255)
atatCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACg > 1:206680/1‑93 (MQ=255)
atCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACgtg < 1:2145984/93‑1 (MQ=255)
tCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACgtgg > 2:6963741/1‑93 (MQ=255)
ccATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACgtggt < 1:3072781/93‑1 (MQ=255)
aTCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGa > 1:540648/1‑93 (MQ=255)
aTCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGa > 1:726919/1‑93 (MQ=255)
tCGCCCGGAATATGAATAAAAACATCAACAACGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGAGAt > 1:4587855/1‑93 (MQ=255)
tCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGAt > 1:3530119/1‑93 (MQ=255)
tCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGAt > 1:4046416/1‑93 (MQ=255)
cGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGAtg < 1:4872939/93‑1 (MQ=255)
gCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGAtgt < 1:7423861/93‑1 (MQ=255)
gCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGAtgt > 2:1639823/1‑93 (MQ=255)
cccGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGAtgtg > 2:2539215/1‑93 (MQ=255)
ccGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATgtgt > 2:5924405/1‑93 (MQ=255)
ggAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCa > 1:7712550/1‑93 (MQ=255)
aaTATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCaaa < 2:1804860/93‑1 (MQ=255)
tatGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATg > 2:3716228/1‑93 (MQ=255)
gAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATgaga < 1:6566331/93‑1 (MQ=255)
aaTAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGAc < 1:6944171/93‑1 (MQ=255)
aTAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACg > 2:6920339/1‑93 (MQ=255)
tAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGc > 2:6086030/1‑93 (MQ=255)
tAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGc < 2:7330664/93‑1 (MQ=255)
aaaaCATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGctc > 2:2897344/1‑93 (MQ=255)
aaaCATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGctct < 2:5019175/93‑1 (MQ=255)
aaaCATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGctct > 1:1698057/1‑93 (MQ=255)
aTCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATg < 1:395942/93‑1 (MQ=255)
aacaaAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTc > 1:5474301/1‑93 (MQ=255)
acaaAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCa < 2:4222062/93‑1 (MQ=255)
acaaAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCa < 2:4943108/93‑1 (MQ=255)
acaaAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCa < 2:2924742/93‑1 (MQ=255)
caaAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAg < 2:1533983/93‑1 (MQ=255)
caaAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAg > 1:311326/1‑93 (MQ=255)
caaAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAg < 1:4495448/93‑1 (MQ=255)
aaaGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAgg < 2:4373946/93‑1 (MQ=255)
aaaGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAgg < 1:3462152/93‑1 (MQ=255)
aaGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGAGGCTCTGATGTTCAggg > 1:6226682/1‑93 (MQ=255)
aaGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAggg < 2:2514646/93‑1 (MQ=255)
aaGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAggg > 1:5224986/1‑93 (MQ=255)
aGATTAAATTATCCAGAGGTTACTGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAgggg > 2:4352633/1‑93 (MQ=255)
gATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAggggg < 2:1016201/93‑1 (MQ=255)
ttAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGt > 2:7096554/1‑93 (MQ=255)
ttAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGt > 1:59601/1‑93 (MQ=255)
tAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGtt > 1:652107/1‑93 (MQ=255)
tAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGtt > 2:6017921/1‑93 (MQ=255)
tAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGtt < 1:7146039/93‑1 (MQ=255)
aaaTTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGGCGCTCTGATGTTCAGGGGGGTTa < 2:3970154/93‑1 (MQ=255)
aaTTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTAt > 1:4141303/1‑93 (MQ=255)
aTTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATc < 1:992125/93‑1 (MQ=255)
ttATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATcg > 2:3369545/1‑93 (MQ=255)
tATCCAGAGGTTACCGCTGCGTCTGTGGCCGGAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATcgg > 2:5712319/1‑92 (MQ=255)
tCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGt > 2:4055922/1‑93 (MQ=255)
tCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGt > 2:7458695/1‑93 (MQ=255)
tCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGt < 1:1918727/93‑1 (MQ=255)
tCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGt > 2:5297808/1‑93 (MQ=255)
cAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGtat > 2:7412217/1‑93 (MQ=255)
cAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGtat > 1:37746/1‑93 (MQ=255)
agagGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGtata < 2:1963137/93‑1 (MQ=255)
agagGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGtata < 1:786664/93‑1 (MQ=255)
gagGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATAc < 2:6828668/93‑1 (MQ=255)
gagGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATAc > 1:590918/1‑93 (MQ=255)
gagGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATAc > 2:6282143/1‑93 (MQ=255)
gagGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATAc > 2:1310403/1‑93 (MQ=255)
gagGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTAATGTTCAGGGGGGTTATCGCGTATAc < 2:6452484/93‑1 (MQ=255)
gacgTTACCGTTGCGTCTGTGGTCGTAACAGCATCCGACGTGGTGATGTGTCAAATGAGACGGTCTGATGTTCAGGGGGGTTATCGCGTATAc < 1:7804371/90‑1 (MQ=255)
agGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACg < 2:5778833/93‑1 (MQ=255)
gTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGa > 1:7772430/1‑93 (MQ=255)
gTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGa < 1:1485210/93‑1 (MQ=255)
ttACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGAt < 2:3527732/93‑1 (MQ=255)
ttACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGAt < 2:7643117/93‑1 (MQ=255)
tACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATc > 1:1086999/1‑93 (MQ=255)
|
ATAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACTGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATC > NC_000913/2010425‑2010603
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAATAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACTGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGTGG > NC_000913/2010423‑2010607
|
CGATAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGT > SRR4302543.6590748/1‑94 (MQ=60)
CAATAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGT < SRR4302543.3824671/94‑1 (MQ=60)
TAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGC < SRR4302543.7966034/94‑1 (MQ=60)
TAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGC < SRR4302543.2292062/94‑1 (MQ=60)
TAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGC > SRR4302543.537058/1‑94 (MQ=60)
TAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGC > SRR4302543.1503364/1‑94 (MQ=60)
AATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTC > SRR4302543.5003315/1‑94 (MQ=60)
AATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTC > SRR4302543.2103949/1‑94 (MQ=60)
AATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTC > SRR4302543.6135992/1‑94 (MQ=60)
ATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCT > SRR4302543.463347/1‑94 (MQ=60)
ATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCT < SRR4302543.2232113/94‑1 (MQ=60)
TACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGT < SRR4302543.769671/94‑1 (MQ=60)
CCCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTG < SRR4302543.5407860/94‑1 (MQ=60)
ACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTG < SRR4302543.5407859/94‑1 (MQ=60)
ACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTG < SRR4302543.4866300/94‑1 (MQ=60)
CCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGG < SRR4302543.290224/94‑1 (MQ=60)
CCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGG < SRR4302543.3029607/94‑1 (MQ=60)
CACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGT > SRR4302543.7228141/1‑94 (MQ=60)
CACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGT > SRR4302543.3277714/1‑94 (MQ=60)
ACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTC < SRR4302543.7591327/94‑1 (MQ=60)
TCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAA < SRR4302543.7912390/94‑1 (MQ=60)
CAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAAC > SRR4302543.4071093/1‑94 (MQ=60)
CAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAAC > SRR4302543.1159382/1‑94 (MQ=60)
AAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAAAAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACA < SRR4302543.107781/94‑1 (MQ=60)
AAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAA > SRR4302543.2278410/1‑94 (MQ=60)
AAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAAC > SRR4302543.3927275/1‑94 (MQ=60)
AAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAAC < SRR4302543.4276164/94‑1 (MQ=60)
AATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACA > SRR4302543.1054957/1‑94 (MQ=60)
ATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACAT < SRR4302543.5145988/94‑1 (MQ=60)
CGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCC < SRR4302543.177034/94‑1 (MQ=60)
CGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCC < SRR4302543.1723819/94‑1 (MQ=60)
CGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCC < SRR4302543.4425966/94‑1 (MQ=60)
CGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCC < SRR4302543.4425965/94‑1 (MQ=60)
CGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCC < SRR4302543.4425964/94‑1 (MQ=60)
GCACATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCG < SRR4302543.3069693/94‑1 (MQ=60)
CTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGA > SRR4302543.4681366/1‑94 (MQ=60)
CTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGA < SRR4302543.7094360/94‑1 (MQ=60)
CATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACG > SRR4302543.208432/1‑94 (MQ=60)
ATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCGGACGT > SRR4302543.1920730/1‑94 (MQ=60)
ATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGG > SRR4302543.3540686/1‑94 (MQ=60)
ATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGG < SRR4302543.2165197/94‑1 (MQ=60)
CCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTG < SRR4302543.3100416/94‑1 (MQ=60)
CCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTG < SRR4302543.7124426/94‑1 (MQ=60)
CATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGT > SRR4302543.5386421/1‑94 (MQ=60)
CATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGA > SRR4302543.733454/1‑94 (MQ=60)
CATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGA > SRR4302543.545648/1‑94 (MQ=60)
ATCGCCCGGAATATGAATAAAAACATCAACAACGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGAGAT > SRR4302543.4629530/1‑94 (MQ=60)
ATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGAT < SRR4302543.5330654/94‑1 (MQ=60)
ATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGAT > SRR4302543.4082628/1‑94 (MQ=60)
ATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGAT < SRR4302543.7850164/94‑1 (MQ=60)
ATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGAT > SRR4302543.3561562/1‑94 (MQ=60)
CGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGT < SRR4302543.4917358/94‑1 (MQ=60)
CGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGT < SRR4302543.4917359/94‑1 (MQ=60)
CGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGT > SRR4302543.6205898/1‑94 (MQ=60)
GCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTG < SRR4302543.7495059/94‑1 (MQ=60)
GCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTG > SRR4302543.68934/1‑94 (MQ=60)
GCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTG < SRR4302543.601613/94‑1 (MQ=60)
CCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGT > SRR4302543.4860516/1‑94 (MQ=60)
CCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTC < SRR4302543.3037300/94‑1 (MQ=60)
CGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCA > SRR4302543.7785499/1‑94 (MQ=60)
GGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAA > SRR4302543.6494625/1‑94 (MQ=60)
GGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAA > SRR4302543.5501852/1‑94 (MQ=60)
AATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAAT > SRR4302543.4579148/1‑94 (MQ=60)
AATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAAT > SRR4302543.5166065/1‑94 (MQ=60)
ATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATG < SRR4302543.1998078/94‑1 (MQ=60)
aataaaaaaaaacaccaccaagaaTAAATTAACCAGAAGTTACCGTTGGGTTTGGGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAG < SRR4302543.5497601/70‑1 (MQ=44)
ACGAATAAAAACATCAACAAAGATTAAATTATCCAGAAGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAG < SRR4302543.2277222/94‑1 (MQ=60)
TGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGA < SRR4302543.6972003/94‑1 (MQ=60)
GAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGAC < SRR4302543.6628123/94‑1 (MQ=60)
GAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGAC < SRR4302543.7746859/94‑1 (MQ=60)
GAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGAC > SRR4302543.7390254/1‑94 (MQ=60)
AATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACG > SRR4302543.7501977/1‑94 (MQ=60)
AATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACG < SRR4302543.7009504/94‑1 (MQ=60)
ATAAAAACATCAACAAAGATTAAATTATACAGAGGTTACCGTTGCGTATGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGC < SRR4302543.3086532/94‑1 (MQ=60)
AAAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTC > SRR4302543.3649558/1‑94 (MQ=60)
AAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCT > SRR4302543.1589977/1‑94 (MQ=60)
AAAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCT > SRR4302543.1713284/1‑94 (MQ=60)
AAACATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTG > SRR4302543.2795202/1‑94 (MQ=60)
ATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGT < SRR4302543.399600/94‑1 (MQ=60)
ATCAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGT > SRR4302543.2181555/1‑94 (MQ=60)
CAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTC > SRR4302543.5523907/1‑94 (MQ=60)
CAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTC > SRR4302543.7786340/1‑94 (MQ=60)
CAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTC > SRR4302543.5103989/1‑94 (MQ=60)
CAACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTC > SRR4302543.5389307/1‑94 (MQ=60)
AACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCA < SRR4302543.381678/94‑1 (MQ=60)
AACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCA < SRR4302543.3254941/94‑1 (MQ=60)
ACAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAG > SRR4302543.314132/1‑94 (MQ=60)
CAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGG < SRR4302543.4536303/94‑1 (MQ=60)
CAAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGG < SRR4302543.2082562/94‑1 (MQ=60)
AAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGAGGCTCTGATGTTCAGGG > SRR4302543.6285456/1‑94 (MQ=60)
AAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGG < SRR4302543.3493165/94‑1 (MQ=60)
AAAGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGG > SRR4302543.5272031/1‑94 (MQ=60)
AGATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGG > SRR4302543.7053791/1‑94 (MQ=60)
GATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGG > SRR4302543.7267460/1‑94 (MQ=60)
ATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGT > SRR4302543.60127/1‑94 (MQ=60)
ATTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGT > SRR4302543.3066662/1‑94 (MQ=60)
TTAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTT > SRR4302543.658079/1‑94 (MQ=60)
TAAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTA < SRR4302543.7215492/94‑1 (MQ=60)
AAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTAT < SRR4302543.1453222/94‑1 (MQ=60)
AAATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTAT > SRR4302543.4178699/1‑94 (MQ=60)
AATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATC > SRR4302543.3117481/1‑94 (MQ=60)
AATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATC > SRR4302543.5699291/1‑94 (MQ=60)
AATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATC < SRR4302543.4085442/94‑1 (MQ=60)
ATTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCG < SRR4302543.1000883/94‑1 (MQ=60)
TTATCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGC < SRR4302543.5625361/94‑1 (MQ=60)
TCCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTA < SRR4302543.1936026/94‑1 (MQ=60)
CCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTAT > SRR4302543.6180222/1‑94 (MQ=60)
CCAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTAT > SRR4302543.38093/1‑94 (MQ=60)
CAGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATA > SRR4302543.6000837/1‑94 (MQ=60)
AGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATAC > SRR4302543.596346/1‑94 (MQ=60)
AGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATAC < SRR4302543.793587/94‑1 (MQ=60)
AGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATAC < SRR4302543.793586/94‑1 (MQ=60)
AGAGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATAC < SRR4302543.1100677/94‑1 (MQ=60)
GACGTTACCGTTGCGTCTGTGGTCGTAACAGCATCCGACGTGGTGATGTGTCAAATGAGACGGTCTGATGTTCAGGGGGGTTATCGCGTATACG < SRR4302543.7877943/94‑1 (MQ=60)
AGGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGG < SRR4302543.4633574/94‑1 (MQ=60)
GGTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGA > SRR4302543.7845746/1‑94 (MQ=60)
GTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGAT < SRR4302543.1498582/94‑1 (MQ=60)
GTTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGAT < SRR4302543.3003653/94‑1 (MQ=60)
TTACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATC > SRR4302543.1096765/1‑94 (MQ=60)
TACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCG > SRR4302543.2989748/1‑94 (MQ=60)
ACCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGT > SRR4302543.3515808/1‑94 (MQ=60)
CCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTTTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGTG > SRR4302543.2081294/1‑94 (MQ=60)
CCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGTG < SRR4302543.7636796/94‑1 (MQ=60)
CCGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGTG < SRR4302543.564415/94‑1 (MQ=60)
CGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATTCGGATCGTGG > SRR4302543.484730/1‑94 (MQ=60)
CGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGTGG < SRR4302543.413065/94‑1 (MQ=60)
CGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGTGG < SRR4302543.4504759/94‑1 (MQ=60)
CGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGTGG < SRR4302543.5419328/94‑1 (MQ=60)
|
CAATAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAGATTAAATTATCCAGAGGTTACTGTTGCGTCTGTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGTGG > NC_000913/2010423‑2010607
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
