Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,997,285	(T)_6→7	coding (629/756 nt)	b2865 ←	putative lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,997,279	1	.	T	99.7%	1148.7 / NA	315	I212N (ATC→AAC)	b2865	putative lipoprotein
Reads supporting (aligned to +/- strand): ref base . (0/1); major base T (162/151); minor base G (1/0); total (163/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 368 total aligned reads displayed.

GCAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT  >  NC_000913/2997187‑2997366

gcAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGa                                                                                          <  2:1443106/93‑1 (MQ=255)

gcAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGa                                                                                          <  2:3108988/93‑1 (MQ=255)

 cAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGACCAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑t                                                                                        <  1:1990476/93‑1 (MQ=255)

 cAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑t                                                                                        <  2:7884314/93‑1 (MQ=255)

  aaGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tt                                                                                       >  2:1374831/1‑93 (MQ=255)

   aGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑ttt                                                                                      >  2:1814040/1‑93 (MQ=255)

   aGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑ttt                                                                                      >  2:1517692/1‑93 (MQ=255)

    gTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tttt                                                                                     >  1:7292136/1‑93 (MQ=255)

     tAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑ttttt                                                                                    >  1:940440/1‑93 (MQ=255)

      aaCGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tttttt                                                                                   >  1:5417502/1‑93 (MQ=255)

         gTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑tttttttgc                                                                                >  1:2165214/1‑90 (MQ=255)

            gCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCa                                                                              <  2:5429268/93‑1 (MQ=255)

            gCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGCGCTCCCCATAGTGGCGATTTTTTTGCCCa                                                                              >  1:3872499/1‑93 (MQ=255)

             cGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAg                                                                             <  2:2641643/93‑1 (MQ=255)

               gATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGcc                                                                           >  1:7189520/1‑93 (MQ=255)

                aTCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCt                                                                          >  1:4076156/1‑93 (MQ=255)

                  cAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTc                                                                        <  1:5702979/93‑1 (MQ=255)

                  cAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTc                                                                        <  2:4497608/93‑1 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       <  1:2247191/93‑1 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       >  2:4591968/1‑93 (MQ=255)

                   aaTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCa                                                                       <  1:340642/93‑1 (MQ=255)

                    aTTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCAAGCCTTCAc                                                                      >  2:798855/1‑93 (MQ=255)

                     ttGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACg                                                                     >  2:4329241/1‑93 (MQ=255)

                       gCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCt                                                                   >  1:3258231/1‑93 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  >  2:7360024/1‑93 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  >  2:6365329/1‑93 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  >  2:2723878/1‑93 (MQ=255)

                        ccGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCtt                                                                  <  1:3784345/93‑1 (MQ=255)

                         cGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCttt                                                                 <  1:1876006/93‑1 (MQ=255)

                         cGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCttt                                                                 <  1:311531/93‑1 (MQ=255)

                           ttGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGc                                                               >  1:47465/1‑93 (MQ=255)

                           ttGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGc                                                               <  2:412388/93‑1 (MQ=255)

                           ttGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGc                                                               <  2:371928/93‑1 (MQ=255)

                             gCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGccc                                                             >  1:2503416/1‑93 (MQ=255)

                             gCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGccc                                                             >  2:3048182/1‑93 (MQ=255)

                               aCGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCat                                                           >  1:5622574/1‑93 (MQ=255)

                               aCGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCat                                                           >  1:4273022/1‑93 (MQ=255)

                                cGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCatt                                                          <  1:3747428/93‑1 (MQ=255)

                                  gTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCattat                                                        >  2:4777259/1‑93 (MQ=255)

                                  gTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCattat                                                        <  1:2606514/93‑1 (MQ=255)

                                     aCGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTa                                                     >  2:1907498/1‑93 (MQ=255)

                                     aCGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTa                                                     >  2:3297835/1‑93 (MQ=255)

                                      cGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAc                                                    <  2:7224086/93‑1 (MQ=255)

                                      cGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAc                                                    >  2:7743838/1‑93 (MQ=255)

                                       gAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAcc                                                   >  1:4013603/1‑93 (MQ=255)

                                       gAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAcc                                                   <  2:3998857/93‑1 (MQ=255)

                                       gAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAcc                                                   >  1:7418761/1‑93 (MQ=255)

                                       gAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTAcc                                                   <  1:4509644/93‑1 (MQ=255)

                                        aaTCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCa                                                  >  1:86923/1‑93 (MQ=255)

                                         aTCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAg                                                 <  1:4656563/93‑1 (MQ=255)

                                           cTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCa                                               >  1:4114342/1‑93 (MQ=255)

                                            tGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAt                                              >  1:5810236/1‑93 (MQ=255)

                                            tGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAt                                              <  1:2659383/93‑1 (MQ=255)

                                             ggAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATc                                             <  2:3511024/93‑1 (MQ=255)

                                              gAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCg                                            >  2:4638021/1‑93 (MQ=255)

                                              gAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCg                                            >  1:1143264/1‑93 (MQ=255)

                                              gAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCg                                            >  1:103583/1‑93 (MQ=255)

                                              gAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCg                                            >  1:5263257/1‑93 (MQ=255)

                                                aaTGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCgtg                                          >  2:5846774/1‑93 (MQ=255)

                                                 aTGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCgtgt                                         <  1:2453289/93‑1 (MQ=255)

                                                 aTGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCgtgt                                         >  2:6557889/1‑93 (MQ=255)

                                                 aTGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCgtgt                                         <  1:5730664/93‑1 (MQ=255)

                                                  tGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTc                                        <  2:912443/93‑1 (MQ=255)

                                                   gCAGGCGAACAGATGCCGTATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTCCCAGCATCGTGTCa                                       <  2:3741219/93‑1 (MQ=255)

                                                   gCAGGCGAACAGATGCCGAATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGGGTCa                                       >  2:1693895/1‑93 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTa                                    <  1:663078/93‑1 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTa                                    <  1:6564576/93‑1 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTa                                    <  2:2148434/93‑1 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTa                                    <  1:4826017/93‑1 (MQ=255)

                                                      ggCGAACAGATGCCGCATCCGTGCTCCCCATAGGGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTa                                    >  2:3395202/1‑93 (MQ=255)

                                                       gCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTAt                                   <  1:6913343/93‑1 (MQ=255)

                                                        cGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATg                                  <  1:627224/93‑1 (MQ=255)

                                                         gAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATgg                                 >  2:2003840/1‑93 (MQ=255)

                                                          aaCAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATggg                                >  2:2526571/1‑93 (MQ=255)

                                                          aaCAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATggg                                >  2:6952547/1‑93 (MQ=255)

                                                          aaCAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATggg                                <  2:7607420/93‑1 (MQ=255)

                                                           aCAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGc                               <  2:3833601/93‑1 (MQ=255)

                                                               aTGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTaa                           <  1:143617/93‑1 (MQ=255)

                                                                tGCCGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAg                          <  2:5028035/93‑1 (MQ=255)

                                                                   cGCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCg                       <  2:5994538/93‑1 (MQ=255)

                                                                    gCATCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgt                      >  2:5288947/1‑93 (MQ=255)

                                                                      aTCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaa                    <  1:499434/93‑1 (MQ=255)

                                                                      aTCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaa                    <  2:2861898/93‑1 (MQ=255)

                                                                      aTCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTACCCATTATTTACCAGCATTGTGTCATTATGGGCGTAAGCCgtaa                    <  2:5871364/93‑1 (MQ=255)

                                                                       tCCGTGCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaat                   >  1:7821092/1‑93 (MQ=255)

                                                                       tCCGTGCGCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCCTAAGCCgtaat                   <  1:1760576/93‑1 (MQ=255)

                                                                           tGCTCCCCATAGTGGCGATTTTTTTGCCAAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaatgtaa               <  1:3926702/93‑1 (MQ=255)

                                                                            gCTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCgtaatgtaat              <  1:2401330/93‑1 (MQ=255)

                                                                             cTCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATc             <  2:6820583/93‑1 (MQ=255)

                                                                              tCCCCATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCt            <  1:1373876/93‑1 (MQ=255)

                                                                               ccccATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCtt           <  2:2095007/93‑1 (MQ=255)

                                                                                 ccATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCa         >  2:4161788/1‑93 (MQ=255)

                                                                                  cATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCAc        >  2:5596308/1‑93 (MQ=255)

                                                                                  cATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCAc        <  1:1661112/93‑1 (MQ=255)

                                                                                  cATAGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCAc        <  2:2449129/93‑1 (MQ=255)

                                                                                     aGTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACtgt     >  1:27683/1‑93 (MQ=255)

                                                                                      gTGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATAATGGGCGTAAGCCGTAATGTAATCTTCACtgtg    >  1:7631725/1‑93 (MQ=255)

                                                                                       tGGCGATTTTTTTGCCCAGCGTTCACGCTTTGCCCATTATTTTCCAGCATCGTTCCATTATGGGCGTAAGCCGTAATGTAATCTTCACTgtgt   <  1:319058/93‑1 (MQ=255)

                                                                                       tGGCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTgtgt   <  1:1824383/93‑1 (MQ=255)

                                                                                        ggCGATTTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGtt  <  1:619346/93‑1 (MQ=255)

GCAAGTAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTTTTTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT  >  NC_000913/2997187‑2997366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCATGAT  >  NC_000913/2997192‑2997376

TAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTT‑T‑TT                                                                                             >  SRR4302543.7323204/1‑94 (MQ=60)

TAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGCGGCGA‑TTT‑T‑TT                                                                                             >  SRR4302543.5466778/1‑94 (MQ=60)

  ACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTT‑T‑TTtg                                                                                           <  SRR4302543.2630950/94‑3 (MQ=60)

   CGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTT‑T‑TTtgc                                                                                          >  SRR4302543.2184614/1‑91 (MQ=60)

    GTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCC                                                                                          >  SRR4302543.5447701/1‑94 (MQ=60)

     TAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCC                                                                                         <  SRR4302543.2198090/94‑1 (MQ=60)

      AGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCA                                                                                        <  SRR4302543.1363883/94‑1 (MQ=60)

      AGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGCGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCA                                                                                        >  SRR4302543.3906691/1‑94 (MQ=60)

        CGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGC                                                                                      >  SRR4302543.4459272/1‑94 (MQ=60)

        CGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGC                                                                                      >  SRR4302543.1587860/1‑94 (MQ=60)

         GGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCC                                                                                     >  SRR4302543.7259255/1‑94 (MQ=60)

          GATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCT                                                                                    >  SRR4302543.4112692/1‑94 (MQ=60)

           ATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTT                                                                                   >  SRR4302543.251305/1‑94 (MQ=60)

            TCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTC                                                                                  >  SRR4302543.2002984/1‑94 (MQ=60)

             CAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCA                                                                                 >  SRR4302543.1170929/1‑94 (MQ=60)

             CAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCA                                                                                 <  SRR4302543.5754995/94‑1 (MQ=60)

             CAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGAGGCCGCATCCGTGCTCCCCATAGTGGGGATTTT‑T‑TTGCCCAGCCTTCC                                                                                 >  SRR4302543.2467626/1‑94 (MQ=60)

              AATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCTAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCAC                                                                                >  SRR4302543.6120802/1‑94 (MQ=60)

              AATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGTCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCCC                                                                                >  SRR4302543.2339544/1‑94 (MQ=60)

              AATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCAC                                                                                <  SRR4302543.2267588/94‑1 (MQ=60)

              AATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCAC                                                                                <  SRR4302543.4265308/94‑1 (MQ=60)

              AATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCAC                                                                                <  SRR4302543.343778/94‑1 (MQ=60)

                 TGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCT                                                                             >  SRR4302543.3287682/1‑94 (MQ=60)

                 TGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCT                                                                             >  SRR4302543.5827599/1‑94 (MQ=60)

                   CCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTT                                                                           <  SRR4302543.4080252/94‑1 (MQ=60)

                   CCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTT                                                                           <  SRR4302543.3874811/94‑1 (MQ=60)

                   CCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTT                                                                           <  SRR4302543.3817682/94‑1 (MQ=60)

                   CCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTT                                                                           >  SRR4302543.1347235/1‑94 (MQ=60)

                    CGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTG                                                                          <  SRR4302543.314340/94‑1 (MQ=60)

                    CGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTG                                                                          <  SRR4302543.1892862/94‑1 (MQ=60)

                    CGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTG                                                                          <  SRR4302543.1420794/94‑1 (MQ=60)

                    CGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTG                                                                          <  SRR4302543.5226385/94‑1 (MQ=60)

                    CGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTG                                                                          <  SRR4302543.1696979/94‑1 (MQ=60)

                    CGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTG                                                                          <  SRR4302543.7788146/94‑1 (MQ=60)

                    CGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCAGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTG                                                                          >  SRR4302543.1302168/1‑94 (MQ=60)

                     GTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGC                                                                         >  SRR4302543.47904/1‑94 (MQ=60)

                     GTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGC                                                                         <  SRR4302543.4824347/94‑1 (MQ=60)

                      TTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCC                                                                        <  SRR4302543.4568173/94‑1 (MQ=60)

                       TGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCC                                                                       >  SRR4302543.2526142/1‑94 (MQ=60)

                         CACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCAT                                                                     >  SRR4302543.5673813/1‑94 (MQ=60)

                         CACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCAT                                                                     >  SRR4302543.4311856/1‑94 (MQ=60)

                         CACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCAT                                                                     <  SRR4302543.3802030/94‑1 (MQ=60)

                          ACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATT                                                                    <  SRR4302543.5556412/94‑1 (MQ=60)

                          ACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATT                                                                    >  SRR4302543.3933370/1‑94 (MQ=60)

                           CGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTA                                                                   <  SRR4302543.111626/94‑1 (MQ=60)

                           CGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTA                                                                   <  SRR4302543.3780399/94‑1 (MQ=60)

                           CGGAAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGAGTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTA                                                                   >  SRR4302543.3951021/1‑94 (MQ=60)

                            GGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTAT                                                                  >  SRR4302543.2109467/1‑94 (MQ=60)

                            GGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTAT                                                                  <  SRR4302543.5081437/94‑1 (MQ=60)

                            GGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTAT                                                                  >  SRR4302543.3968437/1‑94 (MQ=60)

                             GTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATT                                                                 <  SRR4302543.2630188/94‑1 (MQ=60)

                             GTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATT                                                                 >  SRR4302543.3809026/1‑94 (MQ=60)

                             GTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATT                                                                 <  SRR4302543.3686747/94‑1 (MQ=60)

                                 agacTCTGGATATGCAGGCGAACAGATGCCGCATCCGTGCGCCCCATGGTGGCGA‑TTT‑TATTGAACAGCCTTCACGCTTTGCCCATTATTTACC                                                             <  SRR4302543.4148729/90‑1 (MQ=60)

                                 CGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACC                                                             >  SRR4302543.4049449/1‑94 (MQ=60)

                                 CGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACC                                                             >  SRR4302543.7489922/1‑94 (MQ=60)

                                 CGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACC                                                             >  SRR4302543.3190273/1‑94 (MQ=60)

                                 CGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACC                                                             >  SRR4302543.7032296/1‑94 (MQ=60)

                                 CGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACC                                                             <  SRR4302543.4148728/94‑1 (MQ=60)

                                  GAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCA                                                            >  SRR4302543.87724/1‑94 (MQ=60)

                                  GAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCA                                                            <  SRR4302543.4550652/94‑1 (MQ=60)

                                   AATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAG                                                           <  SRR4302543.3823236/94‑1 (MQ=60)

                                   AATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAG                                                           >  SRR4302543.6223163/1‑94 (MQ=60)

                                    ATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGC                                                          >  SRR4302543.7521808/1‑94 (MQ=60)

                                    ATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGC                                                          <  SRR4302543.4847112/94‑1 (MQ=60)

                                    ATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGC                                                          <  SRR4302543.4698971/94‑1 (MQ=60)

                                     TCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCA                                                         >  SRR4302543.4151402/1‑94 (MQ=60)

                                      CTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAT                                                        >  SRR4302543.5862858/1‑94 (MQ=60)

                                      CTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAT                                                        >  SRR4302543.5863081/1‑94 (MQ=60)

                                      CTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAT                                                        <  SRR4302543.7531929/94‑1 (MQ=60)

                                      CTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCAT                                                        <  SRR4302543.6380207/94‑1 (MQ=60)

                                       TGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATC                                                       <  SRR4302543.2683496/94‑1 (MQ=60)

                                       TGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATC                                                       <  SRR4302543.2588933/94‑1 (MQ=60)

                                        GGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCG                                                      >  SRR4302543.7146607/1‑94 (MQ=60)

                                        GGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCG                                                      >  SRR4302543.104539/1‑94 (MQ=60)

                                        GGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCG                                                      >  SRR4302543.7146606/1‑94 (MQ=60)

                                        GGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCG                                                      >  SRR4302543.1153682/1‑94 (MQ=60)

                                        GGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCG                                                      >  SRR4302543.5310739/1‑94 (MQ=60)

                                         GAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGT                                                     >  SRR4302543.7484166/1‑94 (MQ=60)

                                         GAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGT                                                     >  SRR4302543.1788633/1‑94 (MQ=60)

                                          AAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTG                                                    <  SRR4302543.754882/94‑1 (MQ=60)

                                            ATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTC                                                  <  SRR4302543.4156033/94‑1 (MQ=60)

                                            ATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTC                                                  <  SRR4302543.5782954/94‑1 (MQ=60)

                                            ATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTC                                                  <  SRR4302543.2475418/94‑1 (MQ=60)

                                             TGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCA                                                 <  SRR4302543.5804973/94‑1 (MQ=60)

                                             TGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCA                                                 <  SRR4302543.945475/94‑1 (MQ=60)

                                             AGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCA                                                 <  SRR4302543.5489060/94‑1 (MQ=60)

                                                AGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTA                                              >  SRR4302543.6647070/1‑94 (MQ=60)

                                                AGG‑GAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTAT                                             <  SRR4302543.4750703/94‑1 (MQ=60)

                                                 GGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTAT                                             <  SRR4302543.1865421/94‑1 (MQ=60)

                                                 GGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTAT                                             <  SRR4302543.5715679/94‑1 (MQ=60)

                                                 GGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTAT                                             <  SRR4302543.6626350/94‑1 (MQ=60)

                                                 GGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTAT                                             <  SRR4302543.669175/94‑1 (MQ=60)

                                                 GGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTAT                                             <  SRR4302543.4870058/94‑1 (MQ=60)

                                                 GGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTAT                                             <  SRR4302543.7712074/94‑1 (MQ=60)

                                                 GGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTAT                                             >  SRR4302543.4121590/1‑94 (MQ=60)

                                                  GCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATG                                            <  SRR4302543.6978330/94‑1 (MQ=60)

                                                  GCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATG                                            <  SRR4302543.5496689/94‑1 (MQ=60)

                                                  GCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATG                                            <  SRR4302543.5778901/94‑1 (MQ=60)

                                                   CGAACAGATGCCGCATCCGTGCTCCGCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGG                                           <  SRR4302543.632964/94‑1 (MQ=60)

                                                   CGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGG                                           >  SRR4302543.3177082/1‑94 (MQ=60)

                                                   CGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGG                                           <  SRR4302543.5037617/94‑1 (MQ=60)

                                                   CGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGG                                           >  SRR4302543.2613122/1‑94 (MQ=60)

                                                   CGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGG                                           <  SRR4302543.632965/94‑1 (MQ=60)

                                                    GAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGG                                          >  SRR4302543.2278045/1‑94 (MQ=60)

                                                    GAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGG                                          >  SRR4302543.2019728/1‑94 (MQ=60)

                                                    GAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGG                                          <  SRR4302543.1986953/94‑1 (MQ=60)

                                                     AACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGC                                         <  SRR4302543.338271/94‑1 (MQ=60)

                                                     AACAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGC                                         >  SRR4302543.2181656/1‑94 (MQ=60)

                                                       CAGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGT                                       >  SRR4302543.3547569/1‑94 (MQ=60)

                                                        AGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTA                                      >  SRR4302543.7861522/1‑94 (MQ=60)

                                                        AGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTA                                      <  SRR4302543.1601809/94‑1 (MQ=60)

                                                        AGATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTA                                      >  SRR4302543.7263877/1‑94 (MQ=60)

                                                          ATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAG                                    <  SRR4302543.330475/94‑1 (MQ=60)

                                                          ATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAG                                    <  SRR4302543.3996661/94‑1 (MQ=60)

                                                          ATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAG                                    >  SRR4302543.2500209/1‑94 (MQ=60)

                                                          ATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAG                                    <  SRR4302543.3400100/94‑1 (MQ=60)

                                                          ATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAG                                    <  SRR4302543.4154292/94‑1 (MQ=60)

                                                          ATGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAG                                    <  SRR4302543.144866/94‑1 (MQ=60)

                                                           TGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGC                                   >  SRR4302543.3024796/1‑94 (MQ=60)

                                                           TGCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGC                                   <  SRR4302543.2710392/94‑1 (MQ=60)

                                                            GCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCC                                  >  SRR4302543.3988806/1‑94 (MQ=60)

                                                            GCCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCC                                  <  SRR4302543.6689291/94‑1 (MQ=60)

                                                             CCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCG                                 >  SRR4302543.7981004/1‑94 (MQ=60)

                                                             CCGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCG                                 >  SRR4302543.1900219/1‑94 (MQ=60)

                                                              CGCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGT                                >  SRR4302543.30466/1‑94 (MQ=60)

                                                              CGCATCCGGGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGT                                <  SRR4302543.432987/94‑1 (MQ=60)

                                                               GCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTA                               >  SRR4302543.1730451/1‑94 (MQ=60)

                                                               GCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTA                               >  SRR4302543.5440391/1‑94 (MQ=60)

                                                               GCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTA                               >  SRR4302543.4871390/1‑94 (MQ=60)

                                                               GCATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTA                               <  SRR4302543.395031/94‑1 (MQ=60)

                                                                 catccttccccccctaagtggcatTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAAT                             <  SRR4302543.870623/70‑1 (MQ=60)

                                                                 ATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAAT                             <  SRR4302543.504054/94‑1 (MQ=60)

                                                                 ATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAAT                             >  SRR4302543.4090551/1‑94 (MQ=60)

                                                                 ATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAAT                             <  SRR4302543.2350203/94‑1 (MQ=60)

                                                                 ATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAAT                             >  SRR4302543.5028511/1‑94 (MQ=60)

                                                                 ATCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAAT                             >  SRR4302543.7894772/1‑94 (MQ=60)

                                                                  TCCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATG                            >  SRR4302543.7994168/1‑94 (MQ=60)

                                                                  TCCGTGCGCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCCTAAGCCGTAATG                            <  SRR4302543.1776309/94‑1 (MQ=60)

                                                                   CCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGT                           <  SRR4302543.176820/94‑1 (MQ=60)

                                                                   CCGTGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGT                           <  SRR4302543.7353916/94‑1 (MQ=60)

                                                                   CCGTCCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGT                           <  SRR4302543.6884022/94‑1 (MQ=60)

                                                                      gtgctcccataggtgcgatTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAAT                        <  SRR4302543.7380533/75‑1 (MQ=60)

                                                                      TGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAAT                        <  SRR4302543.1821506/94‑1 (MQ=60)

                                                                      TGCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAAT                        <  SRR4302543.6069509/94‑1 (MQ=60)

                                                                      TGCTCCCCATAGTGGCGATTTT‑T‑TTGCCAAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAAT                        <  SRR4302543.3961360/94‑1 (MQ=60)

                                                                       GCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATC                       <  SRR4302543.2423043/94‑1 (MQ=60)

                                                                       GCTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATC                       <  SRR4302543.1891776/94‑1 (MQ=60)

                                                                        CTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCT                      >  SRR4302543.3246739/1‑94 (MQ=60)

                                                                        CTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCT                      <  SRR4302543.6472062/94‑1 (MQ=60)

                                                                        CTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCT                      >  SRR4302543.4756535/1‑94 (MQ=60)

                                                                        CTCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCT                      <  SRR4302543.3143545/94‑1 (MQ=60)

                                                                         TCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTT                     >  SRR4302543.6667339/1‑94 (MQ=60)

                                                                         TCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTT                     <  SRR4302543.1386220/94‑1 (MQ=60)

                                                                         TCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTT                     <  SRR4302543.382916/94‑1 (MQ=60)

                                                                         TCCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTT                     <  SRR4302543.458827/94‑1 (MQ=60)

                                                                          CCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTC                    >  SRR4302543.5758363/1‑94 (MQ=60)

                                                                          CCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTC                    <  SRR4302543.1127399/94‑1 (MQ=60)

                                                                          CCCCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTC                    <  SRR4302543.5715868/94‑1 (MQ=60)

                                                                            CCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTGATCTTCAC                  >  SRR4302543.1393120/1‑94 (MQ=60)

                                                                            CCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCAC                  <  SRR4302543.2216825/94‑1 (MQ=60)

                                                                            CCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCAC                  <  SRR4302543.696753/94‑1 (MQ=60)

                                                                            CCATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCAC                  >  SRR4302543.1393119/1‑94 (MQ=60)

                                                                             CATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACT                 >  SRR4302543.524167/1‑94 (MQ=60)

                                                                             CATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACT                 <  SRR4302543.462532/94‑1 (MQ=60)

                                                                             CATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACT                 <  SRR4302543.1675993/94‑1 (MQ=60)

                                                                              ATAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTG                >  SRR4302543.6376983/1‑94 (MQ=60)

                                                                               TAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGT               <  SRR4302543.1807165/94‑1 (MQ=60)

                                                                               TAGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGT               >  SRR4302543.27933/1‑94 (MQ=60)

                                                                                AGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTG              >  SRR4302543.6254708/1‑94 (MQ=60)

                                                                                AGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTG              <  SRR4302543.2468147/94‑1 (MQ=60)

                                                                                AGTGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATAATGGGCGTAAGCCGTAATGTAATCTTCACTGTG              >  SRR4302543.7704140/1‑94 (MQ=60)

                                                                                AGTGGCGA‑TTTGT‑GTGCCCAGCCTTCACGCTTTGCCAATTATTTACCAGCACCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTG              <  SRR4302543.5699968/94‑1 (MQ=60)

                                                                                 gtggagatTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGT             <  SRR4302543.4038669/86‑1 (MQ=60)

                                                                                  gggcgatTTT‑T‑TTGCCCAGCCTTCAGGTTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT            <  SRR4302543.2666289/87‑1 (MQ=60)

                                                                                  TGGCGATTTT‑T‑TTGCCCAGCGTTCACGCTTTGCCCATTATTTTCCAGCATCGTTCCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT            <  SRR4302543.321944/94‑1 (MQ=60)

                                                                                  TGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT            <  SRR4302543.1840763/94‑1 (MQ=60)

                                                                                  TGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT            <  SRR4302543.2666290/94‑1 (MQ=60)

                                                                                  TGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT            <  SRR4302543.321945/94‑1 (MQ=60)

                                                                                  TGGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTT            >  SRR4302543.2545670/1‑94 (MQ=60)

                                                                                   gacgatTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTT           <  SRR4302543.2225909/88‑1 (MQ=60)

                                                                                   GGCGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTT           <  SRR4302543.625017/94‑1 (MQ=60)

                                                                                     CGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAA         >  SRR4302543.247408/1‑94 (MQ=60)

                                                                                     CGATTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAA         >  SRR4302543.2071993/1‑94 (MQ=60)

                                                                                      gatTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAAT        <  SRR4302543.5426605/91‑1 (MQ=60)

                                                                                      gatTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAAT        <  SRR4302543.6379571/91‑1 (MQ=60)

                                                                                      gatTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAAT        <  SRR4302543.564811/91‑1 (MQ=60)

                                                                                      gatTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTATGTTTAAT        >  SRR4302543.3143123/4‑94 (MQ=60)

                                                                                      gatTTT‑T‑TTGCCCAGCCTTCACGCTTGGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCAGTAATTTAATCTTCACTGTGTTTAAT        <  SRR4302543.4429942/91‑1 (MQ=60)

                                                                                       atTTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATC       >  SRR4302543.7556237/3‑94 (MQ=60)

                                                                                       T‑TTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCA      <  SRR4302543.162993/94‑1 (MQ=60)

                                                                                       T‑TTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCA      <  SRR4302543.906041/94‑1 (MQ=60)

                                                                                       T‑TTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCA      <  SRR4302543.6619595/94‑1 (MQ=60)

                                                                                       T‑TTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCA      >  SRR4302543.5289113/1‑94 (MQ=60)

                                                                                         TTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCAT     <  SRR4302543.429574/94‑1 (MQ=60)

                                                                                         TTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCAT     <  SRR4302543.2421173/94‑1 (MQ=60)

                                                                                           T‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCATGA   <  SRR4302543.2736055/94‑1 (MQ=60)

                                                                                             T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCATGAT  <  SRR4302543.1291313/94‑1 (MQ=60)

                                                                                             T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCATGAT  <  SRR4302543.4732809/94‑1 (MQ=60)

                                                                                             T‑TTGCCCAGCCTTCACGCTTTGCCCATTATGTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCATGAT  <  SRR4302543.1007970/94‑1 (MQ=60)

TAACGTAGCGGATCAATTGCCGTTGCACGGTAACGAATCTGGAAATGCAGGCGAACAGATGCCGCATCCGTGCTCCCCATAGTGGCGA‑TTT‑T‑TTGCCCAGCCTTCACGCTTTGCCCATTATTTACCAGCATCGTGTCATTATGGGCGTAAGCCGTAATGTAATCTTCACTGTGTTTAATCATGAT  >  NC_000913/2997192‑2997376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`