Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,162,333	A→G	Y553H (TAT→CAT)	parC ←	DNA topoisomerase IV subunit A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,162,333	0	A	G	99.6%	804.1 / NA	253	Y553H (TAT→CAT)	parC	DNA topoisomerase IV subunit A
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (77/175); minor base C (0/1); total (77/176)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 318 total aligned reads displayed.

CAACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATAGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCA  >  NC_000913/3162243‑3162422

  aCGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCAAGGCTa                                                                                       >  1:182691/1‑93 (MQ=255)

   cGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTAc                                                                                      <  2:4168552/93‑1 (MQ=255)

   cGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGAGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTAc                                                                                      <  1:7644651/93‑1 (MQ=255)

     gTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGa                                                                                    >  2:2997874/1‑93 (MQ=255)

     gTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACCGCCGCGTAATCGGGTCAATGGCATGGCTACGa                                                                                    >  1:4242104/1‑93 (MQ=255)

      tCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGAc                                                                                   <  2:4004349/93‑1 (MQ=255)

      gcGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGAc                                                                                   <  1:5029021/92‑1 (MQ=255)

       cGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGAcc                                                                                  <  2:6434856/93‑1 (MQ=255)

        gCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGGTACGGCCg                                                                                 >  2:3482421/1‑93 (MQ=255)

         ccccAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCgg                                                                                <  1:6724944/93‑1 (MQ=255)

         ccccAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCgg                                                                                <  1:2014314/93‑1 (MQ=255)

         ccccAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTAAGACCgg                                                                                >  1:1038965/1‑93 (MQ=255)

          cccAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGt                                                                               <  1:4450014/93‑1 (MQ=255)

          cccAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGt                                                                               <  1:7735252/93‑1 (MQ=255)

           ccAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTg                                                                              <  2:1164190/93‑1 (MQ=255)

             aGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGa                                                                            <  1:6161098/93‑1 (MQ=255)

             aGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGa                                                                            <  1:5756862/93‑1 (MQ=255)

             aGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGACCGGGGGa                                                                            >  1:1107040/1‑93 (MQ=255)

              ggcggcAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGggggga                                                                           >  2:6509784/1‑91 (MQ=255)

              ggcggcAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGaa                                                                           <  2:1812447/93‑1 (MQ=255)

               gcggcAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCCTGGCTACGACCGGTGGAAt                                                                          >  1:6843380/1‑93 (MQ=255)

                cggcAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATc                                                                         <  1:6457417/93‑1 (MQ=255)

                cggcAACGTTAATTTGCCGGTGAGCGGCTCGCCCTCACCACGCGCCGACGGCATCGTCATCCGGTAAATTGCATAATTATGACCGGGGGAATc                                                                         >  2:6795606/1‑93 (MQ=255)

                  gcAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGACCGGTGGAATcaa                                                                       >  2:7222354/1‑93 (MQ=255)

                    aaCGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTCCCACCGGGGGAATcaaca                                                                     >  2:1582759/1‑93 (MQ=255)

                    aaCGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGACCGGGGGGATgaaca                                                                     >  1:3430738/1‑93 (MQ=255)

                     aCGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCCCGCGCCGACGGCAGCGGAATCGGGGCAATGGCATGGCTACGACCGGGGGAATcaacaa                                                                    >  2:7488417/1‑93 (MQ=255)

                     aCGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATcaacaa                                                                    <  1:7456071/93‑1 (MQ=255)

                     aCGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATcaacaa                                                                    >  1:1372299/1‑93 (MQ=255)

                       gTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCaacaaac                                                                  <  2:7578058/93‑1 (MQ=255)

                       gTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCaacaaac                                                                  <  2:1346592/93‑1 (MQ=255)

                       gTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGGGGGATCaacaaac                                                                  >  2:2881883/1‑93 (MQ=255)

                       gTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGGGGGATCaacaaaa                                                                  >  1:3142382/1‑92 (MQ=255)

                        ttAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCaacaaaca                                                                 <  2:6748291/93‑1 (MQ=255)

                        ttAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCaacaaaca                                                                 <  2:1448756/93‑1 (MQ=255)

                           aTTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGCCGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGGGGAATCAACAAacacca                                                              >  1:7305055/1‑91 (MQ=255)

                           aTTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTa                                                              <  2:1678902/93‑1 (MQ=255)

                            tttGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTAc                                                             <  1:4809901/93‑1 (MQ=255)

                             ttGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTAcc                                                            <  1:1953671/93‑1 (MQ=255)

                                ccGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCCGTGGAATCAACAAAAACCACCggt                                                         >  1:7117720/1‑93 (MQ=255)

                                 cGGTGAGCGGCTCGCCCCGACCACGCGCCGACGGCAGCGGAATCGGGGCAATGGCATGGCTACGACCGGGGGGATCAAAAAAAACCACCgggt                                                        >  2:7023017/1‑91 (MQ=255)

                                  ggTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCggttg                                                       <  2:1906645/93‑1 (MQ=255)

                                  ggTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCggttg                                                       <  1:4095568/93‑1 (MQ=255)

                                    tGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCggttggt                                                     >  1:5501878/1‑93 (MQ=255)

                                    tGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCggttggt                                                     <  2:7694138/93‑1 (MQ=255)

                                    tGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGACCGGTGGGATCAAAAAACACTACCgggtggt                                                     >  2:3169580/1‑93 (MQ=255)

                                     gAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCggttggtt                                                    <  1:6487240/93‑1 (MQ=255)

                                       gCGGCTCGCCCCGACCACGCGCCGACGGCAGCGTAATCGGGGCAAAGGGATGGCTACGACCCGTGGGATCAACAAACACCACCCGGTGGGTGc                                                  >  2:42847/1‑93 (MQ=255)

                                          gCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGctct                                               >  2:2472584/1‑93 (MQ=255)

                                            tCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTa                                             >  1:5293501/1‑93 (MQ=255)

                                            tCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTa                                             <  2:6137810/93‑1 (MQ=255)

                                               cccTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGCATCAACAAACACTACCGGTTGGTTGCTCTTACCt                                          >  2:6848246/1‑93 (MQ=255)

                                                ccTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCtt                                         <  1:2064242/93‑1 (MQ=255)

                                                ccTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCtt                                         <  1:7005174/93‑1 (MQ=255)

                                                 cTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCttt                                        >  1:5370019/1‑93 (MQ=255)

                                                 cTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCttt                                        >  2:2765769/1‑93 (MQ=255)

                                                 cTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCttt                                        >  2:5286329/1‑93 (MQ=255)

                                                  tGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTc                                       >  2:2421594/1‑93 (MQ=255)

                                                  tGACCACGCGCCGACGGCAGCGGAATCGGGTCAATGGCATGGCTACGACCGGTGGCATCAACAAACACTACCGGTTGGTTGGTCTTCCCttta                                       >  2:6691169/1‑92 (MQ=255)

                                                    aCCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCAc                                     <  1:1609312/93‑1 (MQ=255)

                                                    aCCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCAc                                     >  2:5768267/1‑93 (MQ=255)

                                                    aCCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCAc                                     <  1:302462/93‑1 (MQ=255)

                                                       aCGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCAccgc                                  <  1:326403/93‑1 (MQ=255)

                                                       aCGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCAccgc                                  <  1:3897559/93‑1 (MQ=255)

                                                        cgcgCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTCCCGGTTGGTTGCTCTTACCTTTCAccgcc                                 <  1:4981186/93‑1 (MQ=255)

                                                        cgcgCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCAccgcc                                 <  2:4680489/93‑1 (MQ=255)

                                                         gcgcCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCAccgccg                                <  2:2655689/93‑1 (MQ=255)

                                                            ccGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCtt                             <  1:3611675/93‑1 (MQ=255)

                                                             cGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCttt                            <  2:5443432/93‑1 (MQ=255)

                                                              gACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAAGAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTg                           >  2:783266/1‑93 (MQ=255)

                                                               aCGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGa                          <  2:5949456/93‑1 (MQ=255)

                                                               aCGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCGCTTACCTTTCACCGCCGCTTTGa                          >  2:4362278/1‑93 (MQ=255)

                                                                 ggCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAg                        >  2:3601579/1‑93 (MQ=255)

                                                                 ggCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAg                        >  2:7308340/1‑93 (MQ=255)

                                                                    aGCGTAGTCGGTTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTa                     <  2:5111964/93‑1 (MQ=255)

                                                                    aGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTa                     >  2:5611013/1‑93 (MQ=255)

                                                                      cGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATc                   <  1:2787681/93‑1 (MQ=255)

                                                                       gTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCa                  <  2:3880947/93‑1 (MQ=255)

                                                                        tAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCAc                 <  1:4719718/93‑1 (MQ=255)

                                                                        tAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCAc                 <  2:7729328/93‑1 (MQ=255)

                                                                         aaTCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCAcc                >  2:2266981/1‑93 (MQ=255)

                                                                           tCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCg              >  1:1529992/1‑93 (MQ=255)

                                                                             gggTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCt            >  2:3833182/1‑93 (MQ=255)

                                                                             gggTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCt            >  1:7260140/1‑93 (MQ=255)

                                                                                tCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTta         >  1:5602400/1‑93 (MQ=255)

                                                                                gcAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTta         <  2:2092463/92‑1 (MQ=255)

                                                                                   atggcatggcTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATaa      >  2:4919397/1‑93 (MQ=255)

                                                                                   atggcatggcTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATaa      <  2:3371743/93‑1 (MQ=255)

                                                                                    tGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAAt     <  1:2365180/93‑1 (MQ=255)

                                                                                    tGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAAt     <  1:2672056/93‑1 (MQ=255)

                                                                                    tGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAAt     >  2:3257434/1‑93 (MQ=255)

                                                                                     ggCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAAtt    <  1:3110419/93‑1 (MQ=255)

                                                                                     ggCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAAtt    <  2:1088774/93‑1 (MQ=255)

                                                                                     ggCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAAtt    <  1:903031/93‑1 (MQ=255)

                                                                                      gCATGGCTACGACGGGTGTAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTc   <  1:5450686/93‑1 (MQ=255)

                                                                                      gCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTc   <  1:4693378/93‑1 (MQ=255)

                                                                                      gCATGGCTACGACCGGGGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCGCCCGCTTTATAATTc   <  2:2186076/93‑1 (MQ=255)

                                                                                       cATGGCTACGACCGGTGGAATCAACAAACCCTACCGGTTGGTTGCTCTTACCTTTCCCCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCa  <  2:4547089/93‑1 (MQ=255)

                                                                                       cATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCa  <  1:2144162/93‑1 (MQ=255)

                                                                                       cATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCa  <  1:2277800/93‑1 (MQ=255)

CAACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATAGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCA  >  NC_000913/3162243‑3162422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGTCAACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATAGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAGGCC  >  NC_000913/3162240‑3162426

GGTCAACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATG                                                                                               <  SRR4302543.7992296/94‑1 (MQ=60)

   CAACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCT                                                                                            <  SRR4302543.688673/94‑1 (MQ=60)

   CAACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCT                                                                                            >  SRR4302543.5503822/1‑94 (MQ=60)

    AACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCAAGGCTA                                                                                           >  SRR4302543.184244/1‑94 (MQ=60)

    AACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTCACCACCCGCCGACGGCAGCGTAAACGGGGCAATGGCATTGCTA                                                                                           >  SRR4302543.1908751/1‑94 (MQ=60)

     ACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTAC                                                                                          <  SRR4302543.2413789/94‑1 (MQ=60)

     ACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTAC                                                                                          <  SRR4302543.3899464/94‑1 (MQ=60)

      CGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACG                                                                                         <  SRR4302543.2136390/94‑1 (MQ=60)

      CGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGAGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACG                                                                                         <  SRR4302543.7717148/94‑1 (MQ=60)

       GGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGA                                                                                        >  SRR4302543.316393/1‑94 (MQ=60)

       GGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACCGCCGCGTAATCGGGTCAATGGCATGGCTACGA                                                                                        >  SRR4302543.4280594/1‑94 (MQ=60)

        GTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGAC                                                                                       <  SRR4302543.4710359/94‑1 (MQ=60)

         GCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACC                                                                                      <  SRR4302543.5074783/94‑1 (MQ=60)

           GCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGG                                                                                    <  SRR4302543.4365918/94‑1 (MQ=60)

           GCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGG                                                                                    >  SRR4302543.1640955/1‑94 (MQ=60)

           GCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTAAGACCGG                                                                                    >  SRR4302543.1048211/1‑94 (MQ=60)

           GCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACCGCAGCGGAAACGGGGCAATGGCATGGCTACGAACGG                                                                                    >  SRR4302543.4415288/1‑94 (MQ=60)

            CCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGT                                                                                   <  SRR4302543.6788484/94‑1 (MQ=60)

            CCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGT                                                                                   <  SRR4302543.2032418/94‑1 (MQ=60)

             CCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTG                                                                                  <  SRR4302543.4490318/94‑1 (MQ=60)

             CCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTG                                                                                  <  SRR4302543.5062757/94‑1 (MQ=60)

             CCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTG                                                                                  <  SRR4302543.7808341/94‑1 (MQ=60)

             CCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTG                                                                                  <  SRR4302543.7207090/94‑1 (MQ=60)

             CCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCCGACCACGCGCCGACGGCAGCGTGATCGGGTCAAAGGCATGGCTACGACCGGCG                                                                                  >  SRR4302543.4017904/1‑94 (MQ=60)

             CCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCCCCCTGACCACCCCCCGACGGCCACGTAATCGGGTGAAAGGCATGGCTAAGACCCGTG                                                                                  >  SRR4302543.1058991/1‑94 (MQ=46)

              CCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCCCGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGCCCGGCGG                                                                                 >  SRR4302543.4744480/1‑94 (MQ=60)

              CCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGG                                                                                 <  SRR4302543.2257696/94‑1 (MQ=60)

              CCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGG                                                                                 <  SRR4302543.1554848/94‑1 (MQ=60)

              CCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGGGG                                                                                 >  SRR4302543.4864685/1‑94 (MQ=60)

               CAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCCGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGA                                                                                >  SRR4302543.6931494/1‑94 (MQ=60)

               CAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGA                                                                                <  SRR4302543.2802546/94‑1 (MQ=60)

               CAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGACCGGGGGA                                                                                >  SRR4302543.1117031/1‑94 (MQ=60)

               CAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGCAATCGGGTCAATGGCATGGCTACGACCGGTGGA                                                                                >  SRR4302543.5525655/1‑94 (MQ=60)

                AGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAA                                                                               <  SRR4302543.7486192/94‑1 (MQ=60)

                AGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAA                                                                               <  SRR4302543.6219410/94‑1 (MQ=60)

                AGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAA                                                                               <  SRR4302543.5809320/94‑1 (MQ=60)

                 GGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAAT                                                                              <  SRR4302543.7614806/94‑1 (MQ=60)

                 GGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAAT                                                                              <  SRR4302543.1858779/94‑1 (MQ=60)

                 GGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCCTGGCTACGACCGGTGGAAT                                                                              >  SRR4302543.6907963/1‑94 (MQ=60)

                  GCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGGACACGCGCCCACGGCAGCGTAATCGGGTCAATGGCATGGCTACGAACGGGGGAATA                                                                             >  SRR4302543.4785777/1‑94 (MQ=60)

                   CGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCCATGGGATGGCTACGACCGGgggcaata                                                                            >  SRR4302543.2877165/1‑86 (MQ=60)

                   CGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCA                                                                            <  SRR4302543.6518261/94‑1 (MQ=60)

                   CGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCA                                                                            <  SRR4302543.6518262/94‑1 (MQ=60)

                   CGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCCGTGGGATCA                                                                            >  SRR4302543.4774375/1‑94 (MQ=60)

                   CGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGACCGGggggctca                                                                            >  SRR4302543.2039237/1‑86 (MQ=60)

                   CGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGACCGGTGGAAACA                                                                            >  SRR4302543.566136/1‑94 (MQ=60)

                    GGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCCCACCACGCGCCGACCGCCGCGTAATCGGGTCAAAGGCATGGCTACCACCGGGGGGATCAA                                                                           >  SRR4302543.3094490/1‑94 (MQ=55)

                     GCAACCTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAAC                                                                          <  SRR4302543.6262540/94‑1 (MQ=60)

                      CAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACA                                                                         <  SRR4302543.3211544/94‑1 (MQ=60)

                      CAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACA                                                                         <  SRR4302543.7783238/94‑1 (MQ=60)

                      CAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAAACAACA                                                                         >  SRR4302543.3216438/1‑94 (MQ=60)

                      CAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGGGGAATCAACA                                                                         >  SRR4302543.2150958/1‑94 (MQ=60)

                      CAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGACCGGGGGGATGAACA                                                                         >  SRR4302543.3461436/1‑94 (MQ=60)

                      CAACGTTAATTTGCCGGTGAGCGGCTCGCCCCGACCACGCGCCGACGGCAGCGTAATCGGGTCAATTGCATGGCTAAGACCCGGGGGATCAACA                                                                         >  SRR4302543.2960443/1‑94 (MQ=60)

                       AACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAA                                                                        >  SRR4302543.1384632/1‑94 (MQ=60)

                       AACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCCGGTCAATGGCATGGCTACGACCGGTGGGATCAACAA                                                                        >  SRR4302543.7372982/1‑94 (MQ=60)

                       AACGTTAATTTGCCGGTGAGCGGCTCGCCCCGGCCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGACCGGTGGTATCAACAA                                                                        >  SRR4302543.7583432/1‑94 (MQ=60)

                        ACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAA                                                                       <  SRR4302543.6526403/94‑1 (MQ=60)

                        ACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAA                                                                       <  SRR4302543.7527500/94‑1 (MQ=60)

                         CGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGGGGGATCAACAAAA                                                                      >  SRR4302543.3170645/1‑94 (MQ=60)

                         CGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGAGCCGACGGCAGCGGAATCGGGGGAATAGGATGGCTACGACCGGGGGAAACAACAAAC                                                                      >  SRR4302543.112849/1‑94 (MQ=53)

                          GTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACA                                                                     >  SRR4302543.4688359/1‑94 (MQ=60)

                          GTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGGGGAATCAAAAAACA                                                                     >  SRR4302543.5803336/1‑94 (MQ=60)

                           TTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACAC                                                                    <  SRR4302543.1987348/94‑1 (MQ=60)

                            TAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACT                                                                   >  SRR4302543.4045556/1‑94 (MQ=60)

                            TAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACT                                                                   <  SRR4302543.5435568/94‑1 (MQ=60)

                            TAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACT                                                                   <  SRR4302543.2352330/94‑1 (MQ=60)

                             AATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGCCGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGGGGAATCAACAAACACCA                                                                  >  SRR4302543.7375497/1‑94 (MQ=60)

                              ATTTGTCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTAC                                                                 <  SRR4302543.1619909/94‑1 (MQ=60)

                               TTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATTGCATGGCTACGACCGGTGGAATCAACAAACACTACC                                                                <  SRR4302543.6471912/94‑1 (MQ=60)

                               TTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACC                                                                <  SRR4302543.4853825/94‑1 (MQ=60)

                               TTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACC                                                                <  SRR4302543.2492090/94‑1 (MQ=60)

                               TTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGGGGGATCAACAAACACTACC                                                                >  SRR4302543.7180531/1‑94 (MQ=60)

                               TTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAATGGCATGGCTACGACCGGGGGAATCAACAAACACTAAC                                                                >  SRR4302543.200149/1‑94 (MQ=60)

                               ATTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACC                                                                <  SRR4302543.5431411/94‑1 (MQ=60)

                                TTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCG                                                               <  SRR4302543.1971193/94‑1 (MQ=60)

                                 TGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGG                                                              <  SRR4302543.6968082/94‑1 (MQ=60)

                                  GCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCCGTGGAATCAACAAAAACCACCGGT                                                             >  SRR4302543.7186864/1‑94 (MQ=60)

                                    CGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGGGGAATCAACAAACACTACCGGTTG                                                           >  SRR4302543.6780030/1‑94 (MQ=60)

                                     GGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGGATCAACAAACACTACCGGTTGG                                                          >  SRR4302543.3874272/1‑94 (MQ=60)

                                     GGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGG                                                          <  SRR4302543.4132329/94‑1 (MQ=60)

                                      GTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGT                                                         >  SRR4302543.5551813/1‑94 (MQ=60)

                                       TGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTT                                                        <  SRR4302543.5053781/94‑1 (MQ=60)

                                       TGAGCGGCCCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTT                                                        <  SRR4302543.7288319/94‑1 (MQ=60)

                                        GAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTG                                                       <  SRR4302543.6548355/94‑1 (MQ=60)

                                          GCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCT                                                     <  SRR4302543.5610486/94‑1 (MQ=60)

                                            GGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCT                                                   >  SRR4302543.5763595/1‑94 (MQ=60)

                                             GCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTT                                                  <  SRR4302543.6150718/94‑1 (MQ=60)

                                              CTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTA                                                 >  SRR4302543.5341302/1‑94 (MQ=60)

                                               TCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTAC                                                <  SRR4302543.7360547/94‑1 (MQ=60)

                                               CCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTAC                                                <  SRR4302543.4756114/94‑1 (MQ=60)

                                                CGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACC                                               >  SRR4302543.513655/1‑94 (MQ=60)

                                                CGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGGCAACGGCAAGGATACGACCGGGGGAATCAACAACAACTACCGGTTGGCTGCGCTTAGC                                               >  SRR4302543.513653/1‑94 (MQ=40)

                                                 GCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCT                                              >  SRR4302543.1060580/1‑94 (MQ=60)

                                                 GCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCT                                              <  SRR4302543.7096164/94‑1 (MQ=60)

                                                  CCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTT                                             <  SRR4302543.41881/94‑1 (MQ=60)

                                                   CCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTT                                            >  SRR4302543.5418641/1‑94 (MQ=60)

                                                   CCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTT                                            >  SRR4302543.5418640/1‑94 (MQ=60)

                                                   CCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTT                                            <  SRR4302543.2746664/94‑1 (MQ=60)

                                                   CCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTT                                            <  SRR4302543.7071739/94‑1 (MQ=60)

                                                   CCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTT                                            >  SRR4302543.2371017/1‑94 (MQ=60)

                                                   CCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTT                                            <  SRR4302543.2082701/94‑1 (MQ=60)

                                                   CCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTT                                            <  SRR4302543.1379634/94‑1 (MQ=60)

                                                    CTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTC                                           >  SRR4302543.5322060/1‑94 (MQ=60)

                                                    CTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTC                                           >  SRR4302543.1523864/1‑94 (MQ=60)

                                                    CTCACCAAGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTC                                           <  SRR4302543.7450922/94‑1 (MQ=60)

                                                      GACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCAC                                         <  SRR4302543.6673391/94‑1 (MQ=60)

                                                       ACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACC                                        <  SRR4302543.1623670/94‑1 (MQ=60)

                                                       ACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACC                                        <  SRR4302543.305183/94‑1 (MQ=60)

                                                        CCACGCGCCGACGGCAGCGAAATCGGGTCAATGGCATGGCTACGACCGGTGGGATCAACAAACACTACCGGATGGTTGCTCTTACCTTTCACCG                                       >  SRR4302543.2901116/1‑94 (MQ=60)

                                                          ACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCC                                     <  SRR4302543.7525561/94‑1 (MQ=60)

                                                          ACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCC                                     <  SRR4302543.329364/94‑1 (MQ=60)

                                                          ACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCC                                     <  SRR4302543.3931979/94‑1 (MQ=60)

                                                          ACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCC                                     <  SRR4302543.4296127/94‑1 (MQ=60)

                                                           CGCGCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTCCCGGTTGGTTGCTCTTACCTTTCACCGCCG                                    <  SRR4302543.5026529/94‑1 (MQ=60)

                                                              CCCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTT                                 <  SRR4302543.1939601/94‑1 (MQ=60)

                                                               CCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTT                                <  SRR4302543.3643524/94‑1 (MQ=60)

                                                               CCGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTT                                <  SRR4302543.3369780/94‑1 (MQ=60)

                                                                CGACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTG                               >  SRR4302543.2993200/1‑94 (MQ=60)

                                                                 GACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGA                              <  SRR4302543.6819327/94‑1 (MQ=60)

                                                                  ACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAA                             <  SRR4302543.597064/94‑1 (MQ=60)

                                                                  ACGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAA                             <  SRR4302543.5047371/94‑1 (MQ=60)

                                                                   CGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAG                            <  SRR4302543.3194552/94‑1 (MQ=60)

                                                                   CGGCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAG                            >  SRR4302543.5395654/1‑94 (MQ=60)

                                                                     GCAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCT                          <  SRR4302543.5751064/94‑1 (MQ=60)

                                                                      CAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTA                         >  SRR4302543.2082603/1‑94 (MQ=60)

                                                                      CAGCGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTA                         <  SRR4302543.425062/94‑1 (MQ=60)

                                                                       AGCGTAATCGGCTCAATGGCAGGGCTACGACCGTTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTAT                        <  SRR4302543.7676563/94‑1 (MQ=60)

                                                                         CGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCA                      <  SRR4302543.2813124/94‑1 (MQ=60)

                                                                         CGTAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCA                      >  SRR4302543.1788693/1‑94 (MQ=60)

                                                                           TAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACC                    <  SRR4302543.5615074/94‑1 (MQ=60)

                                                                           TAATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACC                    <  SRR4302543.4762843/94‑1 (MQ=60)

                                                                            AATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCC                   <  SRR4302543.220379/94‑1 (MQ=60)

                                                                             ATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCG                  >  SRR4302543.7694004/1‑94 (MQ=60)

                                                                             ATCGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCG                  >  SRR4302543.1543710/1‑94 (MQ=60)

                                                                              GCGGGGCAATGGCATGGCTGCGACCGGTGGAATCAACAAACACTACCGGTTGTTTGCTCTTCCCTTTCACCGCCGCTTTGAAGCTATCACCCGC                 <  SRR4302543.5769231/94‑1 (MQ=60)

                                                                               CGGGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCT                >  SRR4302543.7330303/1‑94 (MQ=60)

                                                                                 GGTCAATGGCATGTCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTT              <  SRR4302543.3055671/94‑1 (MQ=60)

                                                                                 GGTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTT              <  SRR4302543.3513612/94‑1 (MQ=60)

                                                                                  GTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTA             >  SRR4302543.7855534/1‑94 (MQ=60)

                                                                                  GTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTA             <  SRR4302543.1516490/94‑1 (MQ=60)

                                                                                  GTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTA             <  SRR4302543.2064401/94‑1 (MQ=60)

                                                                                  GTCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTA             >  SRR4302543.5653447/1‑94 (MQ=60)

                                                                                   TCAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTAT            >  SRR4302543.680347/1‑94 (MQ=60)

                                                                                    CAATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATA           <  SRR4302543.830775/94‑1 (MQ=60)

                                                                                      ATGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAAT         >  SRR4302543.3330785/1‑94 (MQ=60)

                                                                                       TGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATT        <  SRR4302543.2386631/94‑1 (MQ=60)

                                                                                       TGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATT        <  SRR4302543.5011594/94‑1 (MQ=60)

                                                                                       TGGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATT        <  SRR4302543.2696285/94‑1 (MQ=60)

                                                                                        GGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTC       <  SRR4302543.910989/94‑1 (MQ=60)

                                                                                        GGCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTC       <  SRR4302543.3138396/94‑1 (MQ=60)

                                                                                         GCATGGCTACGACGGGTGTAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCA      <  SRR4302543.5500123/94‑1 (MQ=60)

                                                                                         GCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCA      <  SRR4302543.4736233/94‑1 (MQ=60)

                                                                                         GCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCA      <  SRR4302543.3488149/94‑1 (MQ=60)

                                                                                         GCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCA      >  SRR4302543.3169850/1‑94 (MQ=60)

                                                                                         GCATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCA      <  SRR4302543.2388956/94‑1 (MQ=60)

                                                                                          CATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAG     <  SRR4302543.7785217/94‑1 (MQ=60)

                                                                                          CATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAG     <  SRR4302543.2298634/94‑1 (MQ=60)

                                                                                          CATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAG     <  SRR4302543.2163357/94‑1 (MQ=60)

                                                                                           ATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAGG    >  SRR4302543.4117576/1‑94 (MQ=60)

                                                                                           ATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAGG    <  SRR4302543.2650136/94‑1 (MQ=60)

                                                                                           ATGGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAGG    >  SRR4302543.1116258/1‑94 (MQ=60)

                                                                                             GGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAGGCC  <  SRR4302543.7506036/94‑1 (MQ=60)

                                                                                             GGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAGGCC  <  SRR4302543.5126284/94‑1 (MQ=60)

                                                                                             GGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAGGCC  <  SRR4302543.5093645/94‑1 (MQ=60)

GGTCAACGGTCGCCCCAGGCGGCAACGTTAATTTGCCGGTGAGCGGCTCGCCCTGACCACGCGCCGACGGCAGCGTAATCGGGTCAATGGCATAGCTACGACCGGTGGAATCAACAAACACTACCGGTTGGTTGCTCTTACCTTTCACCGCCGCTTTGAAGCTATCACCCGCTTTATAATTCAGGCC  >  NC_000913/3162240‑3162426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`