Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,263,328 T→C V114V (GTA→GTG tdcB ← threonine dehydratase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,263,3280TC99.1% 1071.1 / ‑2.0 343V114V (GTA→GTGtdcBthreonine dehydratase
Reads supporting (aligned to +/- strand):  ref base T (2/1);  new base C (170/170);  total (172/171)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01

Only 100 of 353 total aligned reads displayed.

CATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCTACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTT  >  NC_000913/3263238‑3263417
                                                                                          |                                                                                         
cATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCAc                                                                                         >  1:5390992/1‑93 (MQ=255)
 aTTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACt                                                                                        <  1:5291747/93‑1 (MQ=255)
  tttCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACtt                                                                                       >  1:1004651/1‑93 (MQ=255)
  tttCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACtt                                                                                       >  2:7317964/1‑93 (MQ=255)
  tttCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACtt                                                                                       <  2:1692758/93‑1 (MQ=255)
    tCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTg                                                                                     <  2:6060846/93‑1 (MQ=255)
      gACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGa                                                                                   <  1:1220604/93‑1 (MQ=255)
       aCAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGAt                                                                                  >  1:6364393/1‑93 (MQ=255)
        cAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGAtt                                                                                 <  2:812648/93‑1 (MQ=255)
         aaTTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGAttt                                                                                >  2:6331095/1‑93 (MQ=255)
         aaTTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGAttt                                                                                >  2:2558241/1‑93 (MQ=255)
         aaTTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGAttt                                                                                >  2:7584296/1‑93 (MQ=255)
          aTTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGAtttt                                                                               <  2:2690040/93‑1 (MQ=255)
          aTTTCGCCCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGAtttt                                                                               <  1:4952220/93‑1 (MQ=255)
           tttCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTg                                                                              >  1:6080624/1‑93 (MQ=255)
           tttCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTg                                                                              >  2:6006125/1‑93 (MQ=255)
           tttCGCTCACTTTAGCGATAGTGTCGTTGAAGATATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTg                                                                              >  2:1377134/1‑93 (MQ=255)
            ttCGCTCACTTTGGCGATAGTGTGTTTGAAGTTACCACCATGCAGACCGACTTCTGCGGAGTAGTCGCCCGTTGCCGCCACTTGGGATTTTgg                                                                             <  2:1796024/93‑1 (MQ=255)
            ttCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTgg                                                                             <  1:7661859/93‑1 (MQ=255)
             tCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTAGCACGTTGCCGCCCCTTTGGATTTTGgc                                                                            >  1:504709/1‑93 (MQ=255)
               gCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGgcgc                                                                          <  1:1946602/93‑1 (MQ=255)
                cTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCa                                                                         >  1:7336891/1‑93 (MQ=255)
                cTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCa                                                                         <  1:2011740/93‑1 (MQ=255)
                cTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCa                                                                         <  1:3520003/93‑1 (MQ=255)
                 tCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGTAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCAc                                                                        <  2:4470636/93‑1 (MQ=255)
                 tCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCAc                                                                        <  2:3178947/93‑1 (MQ=255)
                 tCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCAc                                                                        >  2:4712806/1‑93 (MQ=255)
                  cACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCAcc                                                                       <  1:5832397/93‑1 (MQ=255)
                   ccTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCt                                                                      <  1:515113/92‑1 (MQ=255)
                    cTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCtt                                                                     <  2:7167780/93‑1 (MQ=255)
                     tttAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCttt                                                                    >  1:2714746/1‑93 (MQ=255)
                      ttAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCtttt                                                                   <  1:1591070/93‑1 (MQ=255)
                      ttAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCtttt                                                                   <  1:4537985/93‑1 (MQ=255)
                       tAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTg                                                                  >  2:4771734/1‑93 (MQ=255)
                       tAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTg                                                                  <  1:5663856/93‑1 (MQ=255)
                       tAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTg                                                                  <  2:2343634/93‑1 (MQ=255)
                         gCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGc                                                                <  2:560105/93‑1 (MQ=255)
                          cGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCa                                                               >  2:6774733/1‑93 (MQ=255)
                           gATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCAt                                                              >  1:5566796/1‑93 (MQ=255)
                           gATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCAt                                                              >  1:3401356/1‑93 (MQ=255)
                           gATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCAt                                                              >  2:4646820/1‑93 (MQ=255)
                           gATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCACACCTTTTGGCAt                                                              >  2:3080531/1‑93 (MQ=255)
                           gATAGTGTCGTTGAAGTTATCACCATGCAGAACGACCTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCAt                                                              <  2:617410/93‑1 (MQ=255)
                            aTAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATc                                                             >  2:7422617/1‑93 (MQ=255)
                             tAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATca                                                            >  2:1209374/1‑93 (MQ=255)
                               gtgtCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATcacc                                                          >  2:1031268/1‑93 (MQ=255)
                                tgtCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATcacca                                                         >  2:3767287/1‑93 (MQ=255)
                                tgtCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATcacca                                                         >  1:6450229/1‑93 (MQ=255)
                                 gtCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATcaccac                                                        <  1:2974810/93‑1 (MQ=255)
                                   cGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACtt                                                      <  2:4825162/93‑1 (MQ=255)
                                   cGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACtt                                                      >  1:5348046/1‑93 (MQ=255)
                                    gTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACttt                                                     >  2:687062/1‑93 (MQ=255)
                                      tGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTAc                                                   <  2:3215307/93‑1 (MQ=255)
                                      tGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTAc                                                   >  2:6616849/1‑93 (MQ=255)
                                      tGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTAc                                                   <  2:5798868/93‑1 (MQ=255)
                                       gAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTAcc                                                  >  2:5062463/1‑93 (MQ=255)
                                       gAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTAcc                                                  <  2:5253768/93‑1 (MQ=255)
                                        aaGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCg                                                 <  2:2423352/93‑1 (MQ=255)
                                          gTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTc                                               <  1:748042/93‑1 (MQ=255)
                                           ttATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCg                                              >  1:3989714/1‑93 (MQ=255)
                                            tATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGa                                             <  1:3127077/93‑1 (MQ=255)
                                            tATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTGGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTcta                                             <  2:2199921/93‑3 (MQ=255)
                                            tATCACCATGCAGAACGACTTCTGCGGAGTAGGCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGa                                             <  1:2170298/93‑1 (MQ=255)
                                             aTCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGAt                                            >  2:7670578/1‑93 (MQ=255)
                                              tCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGAtc                                           >  2:7754963/1‑92 (MQ=255)
                                                 ccATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATAccc                                        >  1:4198714/1‑93 (MQ=255)
                                                 ccATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATAccc                                        <  1:172933/93‑1 (MQ=255)
                                                 ccATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATAccc                                        >  1:5300319/1‑93 (MQ=255)
                                                  cATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCa                                       >  1:6961156/1‑93 (MQ=255)
                                                    tGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGc                                     >  1:2118511/1‑93 (MQ=255)
                                                     gCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCa                                    <  2:4115657/93‑1 (MQ=255)
                                                     gCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCa                                    <  2:3545256/93‑1 (MQ=255)
                                                     gCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCa                                    >  2:519961/1‑93 (MQ=255)
                                                        gAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATcg                                 >  2:5427069/1‑93 (MQ=255)
                                                          aCGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATcgcg                               <  2:4260295/93‑1 (MQ=255)
                                                            gACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCa                             >  1:2676260/1‑93 (MQ=255)
                                                               ttCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAgca                          >  1:1110099/1‑91 (MQ=255)
                                                               ttCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGga                          <  1:7216378/93‑1 (MQ=255)
                                                                tCTGCGGAGTAGTCGCACGTTGCTGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGgag                         <  2:4677374/93‑1 (MQ=255)
                                                                 cTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGgaga                        <  2:5692810/93‑1 (MQ=255)
                                                                 cTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGgaga                        >  1:1311692/1‑93 (MQ=255)
                                                                  tGCGGAGTAGTCGCACGTTGCCGCCACTTTTGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGagag                       <  1:3887421/93‑1 (MQ=255)
                                                                  tGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGagag                       >  2:2738536/1‑93 (MQ=255)
                                                                  tGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGagag                       <  1:3032714/93‑1 (MQ=255)
                                                                   gCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAgg                      <  1:1549941/93‑1 (MQ=255)
                                                                    cGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAggg                     >  1:581123/1‑93 (MQ=255)
                                                                      gAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGaa                   >  1:6676424/1‑93 (MQ=255)
                                                                      gAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGaa                   >  1:4678914/1‑93 (MQ=255)
                                                                      gAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGaa                   >  1:7818006/1‑93 (MQ=255)
                                                                          agtCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAAccc               <  2:444186/93‑1 (MQ=255)
                                                                            tCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCt             <  2:4791496/93‑1 (MQ=255)
                                                                            tCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCt             <  1:1842852/93‑1 (MQ=255)
                                                                              gCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTg           <  1:5195069/93‑1 (MQ=255)
                                                                               cACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTgc          <  2:312358/93‑1 (MQ=255)
                                                                               cACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTgc          <  1:5009868/93‑1 (MQ=255)
                                                                                   ttGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCAt      >  2:1942825/1‑93 (MQ=255)
                                                                                   ttGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCAt      >  2:3425814/1‑93 (MQ=255)
                                                                                     gccgccACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATgg    <  1:6189079/93‑1 (MQ=255)
                                                                                      ccGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGt   <  1:5682723/93‑1 (MQ=255)
                                                                                      ccGCCACTTTGGATTATGGCGCACCTTTTGGCATCACCACTTAACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATAGt   <  2:7043738/93‑1 (MQ=255)
                                                                                          |                                                                                         
CATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCTACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTT  >  NC_000913/3263238‑3263417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTCCATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCTACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTGCCC  >  NC_000913/3263235‑3263421
                                                                                             |                                                                                             
TTCCATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCC                                                                                               >  SRR4302543.6364779/1‑94 (MQ=60)
TTCCATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCC                                                                                               <  SRR4302543.5561117/94‑1 (MQ=60)
TTCCATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCC                                                                                               >  SRR4302543.5260247/1‑94 (MQ=60)
TTCCATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCC                                                                                               >  SRR4302543.2599808/1‑94 (MQ=60)
  CCATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCAC                                                                                             >  SRR4302543.5439991/1‑94 (MQ=60)
  CCATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCAC                                                                                             >  SRR4302543.318527/1‑94 (MQ=60)
   CATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACT                                                                                            >  SRR4302543.7887922/1‑94 (MQ=60)
   CATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACT                                                                                            >  SRR4302543.6326913/1‑94 (MQ=60)
    ATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTTCCGCCACTT                                                                                           >  SRR4302543.5722204/1‑94 (MQ=60)
    ATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTT                                                                                           >  SRR4302543.1013538/1‑94 (MQ=60)
    ATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTT                                                                                           <  SRR4302543.5339526/94‑1 (MQ=60)
    ATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTT                                                                                           >  SRR4302543.4773131/1‑94 (MQ=60)
     TTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTT                                                                                          <  SRR4302543.5003773/94‑1 (MQ=60)
      TTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTG                                                                                         <  SRR4302543.6211291/94‑1 (MQ=60)
      TTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTG                                                                                         >  SRR4302543.6561938/1‑94 (MQ=60)
       TCGACAATTTCGCTCATTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGG                                                                                        <  SRR4302543.560835/94‑1 (MQ=60)
       TCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGG                                                                                        <  SRR4302543.2136876/94‑1 (MQ=60)
       TCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGG                                                                                        >  SRR4302543.4000611/1‑94 (MQ=60)
       TCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGG                                                                                        <  SRR4302543.5081060/94‑1 (MQ=60)
       TCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGG                                                                                        <  SRR4302543.5081061/94‑1 (MQ=60)
         GACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGAT                                                                                      <  SRR4302543.5779476/94‑1 (MQ=60)
         GACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGAT                                                                                      <  SRR4302543.1231575/94‑1 (MQ=60)
         GACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGAT                                                                                      >  SRR4302543.6424241/1‑94 (MQ=60)
           CGATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTT                                                                                    <  SRR4302543.3344794/94‑1 (MQ=60)
           CAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTT                                                                                    <  SRR4302543.4226916/94‑1 (MQ=60)
           CAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTT                                                                                    <  SRR4302543.7288604/94‑1 (MQ=60)
            AATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTT                                                                                   <  SRR4302543.3395975/94‑1 (MQ=60)
             ATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTG                                                                                  >  SRR4302543.6138243/1‑94 (MQ=60)
             ATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTG                                                                                  <  SRR4302543.1479457/94‑1 (MQ=60)
             ATTTCGCCCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTG                                                                                  <  SRR4302543.4997322/94‑1 (MQ=60)
              TTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGG                                                                                 <  SRR4302543.5704488/94‑1 (MQ=60)
               TTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGC                                                                                <  SRR4302543.7734480/94‑1 (MQ=60)
               TTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTAGCACGTTGCCGCCCCTTTGGATTTTGGC                                                                                >  SRR4302543.509399/1‑94 (MQ=60)
                TCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCG                                                                               >  SRR4302543.2079005/1‑94 (MQ=60)
                  GCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCA                                                                             >  SRR4302543.7407470/1‑94 (MQ=60)
                  GCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCA                                                                             <  SRR4302543.1964078/94‑1 (MQ=60)
                   CTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCAC                                                                            >  SRR4302543.5341801/1‑94 (MQ=60)
                   CTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCAC                                                                            >  SRR4302543.2161030/1‑94 (MQ=60)
                   CTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCAC                                                                            <  SRR4302543.3551419/94‑1 (MQ=60)
                   CTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCAC                                                                            <  SRR4302543.2029821/94‑1 (MQ=60)
                   CTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCAC                                                                            >  SRR4302543.7755898/1‑94 (MQ=60)
                   CTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCAAGTTGCCGCCACTTTGGATTTTGGCGCAC                                                                            >  SRR4302543.1569428/1‑94 (MQ=60)
                    TCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACC                                                                           >  SRR4302543.3060593/1‑94 (MQ=60)
                     CACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCT                                                                          <  SRR4302543.4012828/94‑1 (MQ=60)
                     CACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCT                                                                          >  SRR4302543.4598822/1‑94 (MQ=60)
                     CACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCT                                                                          <  SRR4302543.5885443/94‑1 (MQ=60)
                     CACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCT                                                                          <  SRR4302543.5025519/94‑1 (MQ=60)
                      CCTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTT                                                                         <  SRR4302543.519901/94‑1 (MQ=60)
                      ACTTTAGCGATAGTGTCGTTGAAGTTATCCCCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTT                                                                         <  SRR4302543.1167236/94‑1 (MQ=60)
                      ACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTT                                                                         >  SRR4302543.5298200/1‑94 (MQ=60)
                      ACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGGAGTCGCACGCTGCCGACACTTTAGAATTTGGCGCGCCTT                                                                         >  SRR4302543.5298199/1‑94 (MQ=60)
                       CTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTT                                                                        >  SRR4302543.2739417/1‑94 (MQ=60)
                       CTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGCAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTT                                                                        >  SRR4302543.5403732/1‑94 (MQ=60)
                        TTTAGCGGTAGTGTCGTTGAAGGTATCACCATGCAGAACGGCTTCTGCGGAGTAGTCGCACGTTTCCGCCACTTTGGATTTTGGCGCACCTTTT                                                                       <  SRR4302543.3425123/94‑1 (MQ=60)
                        TTTAGCGATAGTGTCGTTGAAGTTATCCCCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTT                                                                       <  SRR4302543.4569127/94‑1 (MQ=60)
                        TTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTT                                                                       <  SRR4302543.1815181/94‑1 (MQ=60)
                        TTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTT                                                                       >  SRR4302543.7491445/1‑94 (MQ=60)
                         TTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTG                                                                      <  SRR4302543.6391070/94‑1 (MQ=60)
                         TTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTG                                                                      <  SRR4302543.1605273/94‑1 (MQ=60)
                         TTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTG                                                                      <  SRR4302543.5151284/94‑1 (MQ=60)
                         TTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTG                                                                      <  SRR4302543.4579300/94‑1 (MQ=60)
                          TAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGG                                                                     <  SRR4302543.5715517/94‑1 (MQ=60)
                           AGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGC                                                                    >  SRR4302543.8009151/1‑94 (MQ=60)
                           AGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGC                                                                    >  SRR4302543.4057737/1‑94 (MQ=60)
                           AGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGC                                                                    >  SRR4302543.2008092/1‑94 (MQ=60)
                            GCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGCCTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGtt                                                                   >  SRR4302543.4622320/1‑92 (MQ=60)
                            GCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCA                                                                   <  SRR4302543.1323184/94‑1 (MQ=60)
                            GCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCA                                                                   <  SRR4302543.347034/94‑1 (MQ=60)
                             CGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCAT                                                                  >  SRR4302543.5000519/1‑94 (MQ=60)
                             CGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCAT                                                                  >  SRR4302543.5617443/1‑94 (MQ=60)
                             CGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCAT                                                                  >  SRR4302543.5128187/1‑94 (MQ=60)
                             CGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCAT                                                                  >  SRR4302543.3431825/1‑94 (MQ=60)
                             CGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTCTGGCAT                                                                  >  SRR4302543.4142983/1‑94 (MQ=60)
                               ATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCA                                                                >  SRR4302543.3569182/1‑94 (MQ=60)
                               ATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCA                                                                <  SRR4302543.6452934/94‑1 (MQ=60)
                               ATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCA                                                                <  SRR4302543.6109110/94‑1 (MQ=60)
                               ATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCA                                                                <  SRR4302543.3020898/94‑1 (MQ=60)
                               ATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCA                                                                >  SRR4302543.3041542/1‑94 (MQ=60)
                                TAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCAC                                                               >  SRR4302543.1671218/1‑94 (MQ=60)
                                 AGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACC                                                              >  SRR4302543.5646746/1‑94 (MQ=60)
                                 AGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACC                                                              >  SRR4302543.1605233/1‑94 (MQ=60)
                                 AGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACC                                                              >  SRR4302543.6440026/1‑94 (MQ=60)
                                 AGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACC                                                              >  SRR4302543.5570568/1‑94 (MQ=60)
                                  GTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCA                                                             >  SRR4302543.6422105/1‑94 (MQ=60)
                                  GTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCA                                                             >  SRR4302543.6511014/1‑94 (MQ=60)
                                    GTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACT                                                           <  SRR4302543.3001824/94‑1 (MQ=60)
                                    GTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACT                                                           <  SRR4302543.5348651/94‑1 (MQ=60)
                                    GTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACT                                                           >  SRR4302543.2609457/1‑94 (MQ=60)
                                     TCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTT                                                          >  SRR4302543.5396443/1‑94 (MQ=60)
                                      CGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTT                                                         >  SRR4302543.7418901/1‑94 (MQ=60)
                                       GTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCTACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTA                                                        >  SRR4302543.1962037/1‑94 (MQ=60)
                                       GTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTA                                                        <  SRR4302543.196631/94‑1 (MQ=60)
                                       GTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTA                                                        <  SRR4302543.3808926/94‑1 (MQ=60)
                                        TTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTAC                                                       >  SRR4302543.154164/1‑94 (MQ=60)
                                         TGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACC                                                      >  SRR4302543.1829078/1‑94 (MQ=60)
                                         TGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACC                                                      <  SRR4302543.2848504/94‑1 (MQ=60)
                                          GAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCG                                                     <  SRR4302543.1714521/94‑1 (MQ=60)
                                          GAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCG                                                     <  SRR4302543.2856272/94‑1 (MQ=60)
                                          GAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCG                                                     >  SRR4302543.3133348/1‑94 (MQ=60)
                                             GTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCG                                                  <  SRR4302543.754690/94‑1 (MQ=60)
                                             GTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCG                                                  >  SRR4302543.4025176/1‑94 (MQ=60)
                                              TTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGA                                                 >  SRR4302543.562236/1‑94 (MQ=60)
                                               TATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGAT                                                <  SRR4302543.3155204/94‑1 (MQ=60)
                                               TATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGAT                                                <  SRR4302543.1641081/94‑1 (MQ=60)
                                               TATCACCATGCAGAACGACTTCTGCGGAGTAGGCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGAT                                                <  SRR4302543.2189742/94‑1 (MQ=60)
                                                ATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATC                                               >  SRR4302543.2145495/1‑94 (MQ=60)
                                                 TCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATAC                                              >  SRR4302543.543604/1‑94 (MQ=60)
                                                 TCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATAC                                              <  SRR4302543.4784860/94‑1 (MQ=60)
                                                  CACCATGCAGAACGACTTCTGCGGAGTAGTCGCAGGTTGCCGCCACTTTGGATTTTCGCGCACCTTTTGGCATCACCACTTTACCGTCGATACC                                             >  SRR4302543.5220380/1‑94 (MQ=60)
                                                  CACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCTACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACC                                             >  SRR4302543.6960380/1‑94 (MQ=60)
                                                  CACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACC                                             <  SRR4302543.7191626/94‑1 (MQ=60)
                                                  CACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACC                                             >  SRR4302543.61366/1‑94 (MQ=60)
                                                   ACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCC                                            >  SRR4302543.5348167/1‑94 (MQ=60)
                                                   ACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCC                                            >  SRR4302543.4236782/1‑94 (MQ=60)
                                                   ACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCC                                            >  SRR4302543.6547732/1‑94 (MQ=60)
                                                    CCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCA                                           <  SRR4302543.174411/94‑1 (MQ=60)
                                                    CCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCA                                           >  SRR4302543.7026656/1‑94 (MQ=60)
                                                     CATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAG                                          <  SRR4302543.7370625/94‑1 (MQ=60)
                                                     CATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAG                                          >  SRR4302543.1093632/1‑94 (MQ=60)
                                                     CATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAG                                          >  SRR4302543.6073975/1‑94 (MQ=60)
                                                     CATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAG                                          <  SRR4302543.2106073/94‑1 (MQ=60)
                                                      ATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGC                                         >  SRR4302543.2137473/1‑94 (MQ=60)
                                                       TGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCA                                        >  SRR4302543.5781582/1‑94 (MQ=60)
                                                          AGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCTACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCG                                     <  SRR4302543.5529707/94‑1 (MQ=60)
                                                          AGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCG                                     >  SRR4302543.1149347/1‑94 (MQ=60)
                                                           GAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGC                                    <  SRR4302543.6806465/94‑1 (MQ=60)
                                                            AACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCG                                   <  SRR4302543.5229523/94‑1 (MQ=60)
                                                            AACGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCG                                   >  SRR4302543.5343061/1‑94 (MQ=60)
                                                              CGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCA                                 >  SRR4302543.7943611/1‑94 (MQ=60)
                                                              CGACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCA                                 >  SRR4302543.2700524/1‑94 (MQ=60)
                                                               GACTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAG                                <  SRR4302543.7055633/94‑1 (MQ=60)
                                                                 CTTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGCA                              >  SRR4302543.1120119/1‑94 (MQ=60)
                                                                  TTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAG                             >  SRR4302543.6003958/1‑94 (MQ=60)
                                                                  TTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAG                             <  SRR4302543.7286323/94‑1 (MQ=60)
                                                                  TTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAG                             <  SRR4302543.5825336/94‑1 (MQ=60)
                                                                  TTCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAG                             <  SRR4302543.2370295/94‑1 (MQ=60)
                                                                   TCTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGA                            >  SRR4302543.1323350/1‑94 (MQ=60)
                                                                    CTGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCTCGCAGGAGAG                           <  SRR4302543.3834482/94‑1 (MQ=60)
                                                                     TGCGGAGTAGTCGCACGTTGCCGCCACTTTTGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGG                          <  SRR4302543.3921735/94‑1 (MQ=60)
                                                                     TGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGG                          <  SRR4302543.3060096/94‑1 (MQ=60)
                                                                     TGCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGG                          <  SRR4302543.7140681/94‑1 (MQ=60)
                                                                      GCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGG                         <  SRR4302543.1563802/94‑1 (MQ=60)
                                                                      GCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGG                         <  SRR4302543.1282441/94‑1 (MQ=60)
                                                                      GCGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGG                         >  SRR4302543.586435/1‑94 (MQ=60)
                                                                       CGGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGA                        >  SRR4302543.7846210/1‑94 (MQ=60)
                                                                        GGAGTAGTCGCACTTTGCCGCCACTTTGGATTTTGGTGCACCTTTTGGCATCACCACTTTACCGTCGATACCTAGCATCGCGtagtatttggaa                       >  SRR4302543.7080847/1‑82 (MQ=60)
                                                                        GGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGGGGGCA                       >  SRR4302543.5370731/1‑94 (MQ=60)
                                                                        GGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAA                       >  SRR4302543.5370732/1‑94 (MQ=60)
                                                                        GGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAA                       <  SRR4302543.1169348/94‑1 (MQ=60)
                                                                        GGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAA                       >  SRR4302543.4721573/1‑94 (MQ=60)
                                                                        GGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAA                       >  SRR4302543.6739456/1‑94 (MQ=60)
                                                                        GGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAA                       >  SRR4302543.6739455/1‑94 (MQ=60)
                                                                        GGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAA                       >  SRR4302543.7891666/1‑94 (MQ=60)
                                                                        GGAGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACAGTCGATACCCAGCATCGCGCAGGAGAGGGAA                       >  SRR4302543.4721571/1‑94 (MQ=60)
                                                                          AGTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAAC                     >  SRR4302543.5869507/1‑94 (MQ=60)
                                                                           GTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACC                    <  SRR4302543.516268/94‑1 (MQ=60)
                                                                           GTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACC                    <  SRR4302543.1018350/94‑1 (MQ=60)
                                                                           GTAGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACC                    <  SRR4302543.1890940/94‑1 (MQ=60)
                                                                             AGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCC                  >  SRR4302543.2398663/1‑94 (MQ=60)
                                                                             AGTCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCC                  <  SRR4302543.5732495/94‑1 (MQ=60)
                                                                               TCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGTCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTT                <  SRR4302543.3451673/94‑1 (MQ=60)
                                                                               TCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTT                <  SRR4302543.5255087/94‑1 (MQ=60)
                                                                               TCGCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTT                <  SRR4302543.1859426/94‑1 (MQ=60)
                                                                                 GCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGC              <  SRR4302543.5241910/94‑1 (MQ=60)
                                                                                 GCACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGC              <  SRR4302543.5880922/94‑1 (MQ=60)
                                                                                  CACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCG             >  SRR4302543.2703468/1‑94 (MQ=60)
                                                                                  CACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCG             <  SRR4302543.5055458/94‑1 (MQ=60)
                                                                                  CACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCG             >  SRR4302543.7642233/1‑94 (MQ=60)
                                                                                  CACGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCG             <  SRR4302543.3095098/94‑1 (MQ=60)
                                                                                    CGTTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCC           >  SRR4302543.4452314/1‑94 (MQ=60)
                                                                                      TTGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATG         >  SRR4302543.1944605/1‑94 (MQ=60)
                                                                                       TGCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGG        >  SRR4302543.7596688/1‑94 (MQ=60)
                                                                                        GCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGT       >  SRR4302543.295790/1‑94 (MQ=60)
                                                                                        GCCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGT       <  SRR4302543.6247555/94‑1 (MQ=60)
                                                                                         CCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTT      <  SRR4302543.5734591/94‑1 (MQ=60)
                                                                                         CCGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTT      <  SRR4302543.1354839/94‑1 (MQ=60)
                                                                                          CGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATTCCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTG     <  SRR4302543.2725335/94‑1 (MQ=60)
                                                                                          CGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTG     >  SRR4302543.6037043/1‑94 (MQ=60)
                                                                                          CGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTG     <  SRR4302543.7476141/94‑1 (MQ=60)
                                                                                          CGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTG     >  SRR4302543.1005847/1‑94 (MQ=60)
                                                                                          CGCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTG     >  SRR4302543.5173638/1‑94 (MQ=60)
                                                                                           GCCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTGC    <  SRR4302543.640515/94‑1 (MQ=60)
                                                                                            CCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTGCC   >  SRR4302543.1103714/1‑94 (MQ=60)
                                                                                            CCACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTGCC   >  SRR4302543.7395586/1‑94 (MQ=60)
                                                                                             CACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTGCCC  >  SRR4302543.1524351/1‑94 (MQ=60)
                                                                                             CACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTGCCC  <  SRR4302543.2700271/94‑1 (MQ=60)
                                                                                             CACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTGCCC  <  SRR4302543.2142563/94‑1 (MQ=60)
                                                                                             CACTTTGGATTTTGGCGCACCTGTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTGCCC  >  SRR4302543.1403534/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTCCATTTCGACAATTTCGCTCACTTTAGCGATAGTGTCGTTGAAGTTATCACCATGCAGAACGACTTCTGCGGAGTAGTCGCACGTTGCCGCTACTTTGGATTTTGGCGCACCTTTTGGCATCACCACTTTACCGTCGATACCCAGCATCGCGCAGGAGAGGGAAACCCCTTGCGCATGGTTGCCC  >  NC_000913/3263235‑3263421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: