Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,806,842 C→T R226C (CGC→TGC)  kdtA → 3‑deoxy‑D‑manno‑octulosonic‑acid transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,806,8420CT99.5% 1543.9 / ‑5.2 429R226C (CGC→TGC) kdtA3‑deoxy‑D‑manno‑octulosonic‑acid transferase
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base T (216/210);  total (218/211)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01

Only 100 of 456 total aligned reads displayed.

GCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTG  >  NC_000913/3806752‑3806931
                                                                                          |                                                                                         
gcAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACgctgcgctgc                                                                                         >  2:2144376/1‑93 (MQ=255)
 cAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCgctgcc                                                                                        >  1:44865/1‑93 (MQ=255)
   aaaaaTAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAg                                                                                      >  2:7319877/1‑93 (MQ=255)
    aaaaTAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGt                                                                                     <  1:1171939/93‑1 (MQ=255)
    aaaaTAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGt                                                                                     <  2:4663941/93‑1 (MQ=255)
      aataatCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTgg                                                                                   >  2:6701461/1‑93 (MQ=255)
      aataatCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTgg                                                                                   >  1:2389092/1‑93 (MQ=255)
         aatCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGca                                                                                <  1:5124036/93‑1 (MQ=255)
             agtcgACAGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGcaccac                                                                            >  2:5172192/5‑93 (MQ=255)
             aGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGcaccac                                                                            >  1:988740/1‑93 (MQ=255)
              ggTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACcaca                                                                           <  1:1557987/93‑1 (MQ=255)
              ggTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACcaca                                                                           <  1:1393195/93‑1 (MQ=255)
                tGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACAcc                                                                         >  1:3245728/1‑93 (MQ=255)
                  aCCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGc                                                                       >  1:7306453/1‑93 (MQ=255)
                  aCCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGc                                                                       >  2:7610989/1‑93 (MQ=255)
                  aCCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGc                                                                       >  1:7611509/1‑93 (MQ=255)
                   ccGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGcc                                                                      >  1:5824257/1‑93 (MQ=255)
                   ccGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGcc                                                                      <  1:1687213/93‑1 (MQ=255)
                   ccGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGcc                                                                      >  1:1861010/1‑93 (MQ=255)
                   ccGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGcc                                                                      >  1:945779/1‑93 (MQ=255)
                    cGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGccc                                                                     >  2:252415/1‑93 (MQ=255)
                      ttACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCgg                                                                   >  1:6844336/1‑93 (MQ=255)
                      ttACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCgg                                                                   >  1:6142607/1‑93 (MQ=255)
                       tACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGt                                                                  <  1:2643093/93‑1 (MQ=255)
                       tACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGt                                                                  <  2:4299266/93‑1 (MQ=255)
                        tccGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTa                                                                 <  1:7921578/92‑1 (MQ=255)
                        aCCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCATTGGGCACCACACCGCCCGGTa                                                                 <  1:2521859/93‑1 (MQ=255)
                          cGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCCCACCTCCCGGTATg                                                               >  2:4109850/1‑93 (MQ=255)
                          cGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATg                                                               >  2:4399120/1‑93 (MQ=255)
                            gTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGa                                                             <  2:71308/93‑1 (MQ=255)
                            gTAGCCTAAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGa                                                             >  1:7396879/1‑93 (MQ=255)
                              aGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGAGGGCACCACACCGCCCGGTATGGAtt                                                           >  1:6418553/1‑93 (MQ=255)
                                ccTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGc                                                         >  1:5282241/1‑93 (MQ=255)
                                 cTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGcc                                                        <  2:5593613/93‑1 (MQ=255)
                                  tGAAATTCGGTATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGcca                                                       >  2:5241909/1‑93 (MQ=255)
                                   gAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGccac                                                      >  2:2978128/1‑93 (MQ=255)
                                   gAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGccac                                                      <  1:2158921/93‑1 (MQ=255)
                                    aaaTTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGccacc                                                     <  2:266444/93‑1 (MQ=255)
                                    aaaTTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGccacc                                                     <  2:1248116/93‑1 (MQ=255)
                                     aaTTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGccacca                                                    <  1:4712177/93‑1 (MQ=255)
                                     aaTTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGccacca                                                    <  2:4541682/93‑1 (MQ=255)
                                       ttCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGc                                                  >  2:1852839/1‑93 (MQ=255)
                                          gATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACt                                               >  2:36382/1‑93 (MQ=255)
                                          gATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACt                                               >  2:509712/1‑93 (MQ=255)
                                           atatTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTc                                              <  1:7527770/93‑1 (MQ=255)
                                           atatTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTc                                              <  2:6486038/93‑1 (MQ=255)
                                           atatTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTc                                              >  1:769976/1‑93 (MQ=255)
                                            tatTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTcc                                             >  2:6567243/1‑92 (MQ=255)
                                            tatTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCa                                             <  2:3857225/93‑1 (MQ=255)
                                            tatTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCa                                             >  2:5395127/1‑93 (MQ=255)
                                               ttCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGa                                          <  1:3744877/93‑1 (MQ=255)
                                                 cTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAg                                        <  1:4132656/93‑1 (MQ=255)
                                                 cTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAg                                        <  1:4603802/93‑1 (MQ=255)
                                                  tGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAgg                                       >  1:106994/1‑93 (MQ=255)
                                                   gTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGc                                      <  1:5662603/93‑1 (MQ=255)
                                                      aCGGCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCTCCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGaa                                   <  1:2795827/93‑1 (MQ=255)
                                                      aCGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTTTGCACCCCACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGaa                                   >  2:4897604/1‑93 (MQ=255)
                                                      aCGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGaa                                   >  1:2923088/1‑93 (MQ=255)
                                                      aCGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGaa                                   <  1:48404/93‑1 (MQ=255)
                                                         ccgcAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAagag                                <  2:2296607/93‑1 (MQ=255)
                                                         ccgcAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCACGGTATGGATTTCCACCAGCAATCACGAAGGCGAagag                                >  1:2847396/1‑93 (MQ=255)
                                                          cgcAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAagaga                               <  2:6782645/93‑1 (MQ=255)
                                                          cgcAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAagaga                               <  1:4372338/93‑1 (MQ=255)
                                                           gcAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAagagag                              <  2:1877678/93‑1 (MQ=255)
                                                             ggTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAgtg                            <  1:3167753/92‑1 (MQ=255)
                                                             aGTTGGGTGCTAAAGCCGTGACGCCGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGGCACCACCACTCACGAAGGCGCagagagag                            >  2:4150469/1‑91 (MQ=255)
                                                              gTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAgtgt                           <  1:1979954/93‑1 (MQ=255)
                                                              gTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAgtgt                           <  2:7749246/93‑1 (MQ=255)
                                                              gTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAgtgg                           >  2:6835986/1‑92 (MQ=255)
                                                                tGGCTGCGAAAGCCGGGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTgtgg                         <  2:5776043/93‑1 (MQ=255)
                                                                   ctgctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGa                      >  2:5450647/1‑93 (MQ=255)
                                                                   ctgctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGa                      <  1:4312623/93‑1 (MQ=255)
                                                                    tgctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGAt                     >  1:5059495/1‑93 (MQ=255)
                                                                    tgctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGAt                     <  2:1540586/93‑1 (MQ=255)
                                                                    tgctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAAGCGAAGAGAGTGTGGTGAt                     >  1:1023622/1‑93 (MQ=255)
                                                                    tgctAAAGCCGTGACGCCGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGAt                     >  2:317315/1‑93 (MQ=255)
                                                                     gctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAGGAGAGTGTGGTGATc                    >  2:3265446/1‑93 (MQ=255)
                                                                     gctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATc                    >  2:6245358/1‑93 (MQ=255)
                                                                     gctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATc                    <  2:1379202/93‑1 (MQ=255)
                                                                     gctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATc                    <  2:3399395/93‑1 (MQ=255)
                                                                      ctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATcg                   >  1:3404619/1‑93 (MQ=255)
                                                                      ctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATcg                   >  2:3531759/1‑93 (MQ=255)
                                                                       tAAAGCCGTGACGCTGTGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGTGAGGGGGGTGATcgc                  >  2:7018253/1‑93 (MQ=255)
                                                                       tAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATcgc                  <  2:1322576/93‑1 (MQ=255)
                                                                         aaGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATcgccg                >  1:864748/1‑93 (MQ=255)
                                                                         aaGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATcgccg                <  1:661278/93‑1 (MQ=255)
                                                                            ccGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGcac             >  2:6096215/1‑93 (MQ=255)
                                                                             cGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGcaca            <  2:7842064/93‑1 (MQ=255)
                                                                             cGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGGATGGATTGCCACCAGCCCTCACGAAGGCGAAGCGAGGGGGGTGTTCTCCCcacc            >  2:1652398/1‑92 (MQ=255)
                                                                               tGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATc          <  1:7176385/93‑1 (MQ=255)
                                                                                gACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCa         <  1:6961593/93‑1 (MQ=255)
                                                                                gACGCGGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGAGCGCCGCACATCa         <  2:1979942/93‑1 (MQ=255)
                                                                                 aCGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAg        <  2:5893423/93‑1 (MQ=255)
                                                                                 aCGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAg        <  2:4481788/93‑1 (MQ=255)
                                                                                 aCGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAg        <  1:3908186/93‑1 (MQ=255)
                                                                                  cgctgcgctgCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAgg       <  2:847537/93‑1 (MQ=255)
                                                                                   tcTGCGCGGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGc      >  2:4796260/2‑93 (MQ=255)
                                                                                     tGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCAt    <  1:3700629/93‑1 (MQ=255)
                                                                                       cgctgcCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTg  <  2:6367085/93‑1 (MQ=255)
                                                                                       cgctgcCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTg  >  1:4038535/1‑93 (MQ=255)
                                                                                          |                                                                                         
GCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTG  >  NC_000913/3806752‑3806931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 232 total aligned reads displayed.
GCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  >  NC_000913/3806752‑3806935
                                                                                          |                                                                                             
 CAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCA                                                                                           >  SRR4302543.2511041/1‑94 (MQ=60)
  AAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAG                                                                                          >  SRR4302543.1049967/1‑94 (MQ=60)
  AAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAG                                                                                          >  SRR4302543.7764944/1‑94 (MQ=60)
   AAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTGTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGT                                                                                         >  SRR4302543.5772844/1‑94 (MQ=60)
   AAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGT                                                                                         <  SRR4302543.1408731/94‑1 (MQ=60)
    AAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTG                                                                                        <  SRR4302543.1182571/94‑1 (MQ=60)
     AAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGG                                                                                       >  SRR4302543.1911172/1‑94 (MQ=60)
     AAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGG                                                                                       <  SRR4302543.2916100/94‑1 (MQ=60)
     AAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGG                                                                                       >  SRR4302543.2410720/1‑94 (MQ=60)
     AAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGG                                                                                       <  SRR4302543.1161743/94‑1 (MQ=60)
      AATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGG                                                                                      >  SRR4302543.7855488/1‑94 (MQ=60)
      AATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGG                                                                                      <  SRR4302543.6037738/94‑1 (MQ=60)
         AATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCAC                                                                                   <  SRR4302543.5160977/94‑1 (MQ=60)
         AATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCAC                                                                                   >  SRR4302543.2866948/1‑94 (MQ=60)
         AATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCAC                                                                                   <  SRR4302543.5170365/94‑1 (MQ=60)
          ATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACC                                                                                  >  SRR4302543.202233/1‑94 (MQ=60)
          ATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACC                                                                                  >  SRR4302543.7593536/1‑94 (MQ=60)
          ATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTAGGCACC                                                                                  <  SRR4302543.6137875/94‑1 (MQ=60)
           TCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCA                                                                                 >  SRR4302543.7188696/1‑94 (MQ=60)
            CAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCAC                                                                                >  SRR4302543.6230579/1‑94 (MQ=60)
             AGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACA                                                                               <  SRR4302543.3682075/94‑1 (MQ=60)
              GGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACAC                                                                              <  SRR4302543.1571909/94‑1 (MQ=60)
              GGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACAC                                                                              >  SRR4302543.1500555/1‑94 (MQ=60)
              GGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACAC                                                                              <  SRR4302543.1405742/94‑1 (MQ=60)
               GTGACCGTTCCCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACC                                                                             <  SRR4302543.1436023/94‑1 (MQ=60)
                TGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCG                                                                            >  SRR4302543.3708496/1‑94 (MQ=60)
                TGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCG                                                                            >  SRR4302543.2326069/1‑94 (MQ=60)
                 GACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGC                                                                           >  SRR4302543.7683780/1‑94 (MQ=60)
                 GACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGC                                                                           >  SRR4302543.1054958/1‑94 (MQ=60)
                 GACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGC                                                                           >  SRR4302543.7376904/1‑94 (MQ=60)
                 GACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGC                                                                           >  SRR4302543.2351434/1‑94 (MQ=60)
                  ACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCC                                                                          >  SRR4302543.5877222/1‑94 (MQ=60)
                  ACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCC                                                                          <  SRR4302543.2840150/94‑1 (MQ=60)
                  ACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCC                                                                          >  SRR4302543.1877730/1‑94 (MQ=60)
                  ACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCC                                                                          >  SRR4302543.954043/1‑94 (MQ=60)
                   CCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCC                                                                         >  SRR4302543.3385985/1‑94 (MQ=60)
                   CCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCC                                                                         <  SRR4302543.1702363/94‑1 (MQ=60)
                   CCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCC                                                                         >  SRR4302543.7872875/1‑94 (MQ=60)
                    CGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCG                                                                        <  SRR4302543.4313586/94‑1 (MQ=60)
                    CGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCG                                                                        <  SRR4302543.4746582/94‑1 (MQ=60)
                    CGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCG                                                                        >  SRR4302543.2575838/1‑94 (MQ=60)
                     GTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGG                                                                       >  SRR4302543.6200785/1‑94 (MQ=60)
                     GTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGG                                                                       >  SRR4302543.6908923/1‑94 (MQ=60)
                      TTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGT                                                                      <  SRR4302543.4636796/94‑1 (MQ=60)
                       TACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTA                                                                     >  SRR4302543.3315247/1‑94 (MQ=60)
                       TACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTA                                                                     <  SRR4302543.2667031/94‑1 (MQ=60)
                        TCCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTAT                                                                    <  SRR4302543.2130818/94‑1 (MQ=60)
                        TCCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTAT                                                                    <  SRR4302543.7995985/94‑1 (MQ=60)
                        ACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTAT                                                                    <  SRR4302543.5853024/94‑1 (MQ=60)
                        ACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTAT                                                                    <  SRR4302543.6438997/94‑1 (MQ=60)
                         CCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATG                                                                   <  SRR4302543.7004096/94‑1 (MQ=60)
                           GGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGA                                                                 >  SRR4302543.3434770/1‑94 (MQ=60)
                           GGTAGCCTAAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGA                                                                 >  SRR4302543.7467909/1‑94 (MQ=60)
                            GTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGAT                                                                >  SRR4302543.3908376/1‑94 (MQ=60)
                            GTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGAT                                                                <  SRR4302543.5164493/94‑1 (MQ=60)
                            GTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGAT                                                                <  SRR4302543.4604243/94‑1 (MQ=60)
                             TAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATT                                                               >  SRR4302543.47556/1‑94 (MQ=60)
                             TAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATT                                                               >  SRR4302543.6479016/1‑94 (MQ=60)
                             TAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGAGGGCACCACACCGCCCGGTATGGATT                                                               >  SRR4302543.6479015/1‑94 (MQ=60)
                               GCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGC                                                             >  SRR4302543.3036171/1‑94 (MQ=60)
                               GCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGC                                                             >  SRR4302543.5329915/1‑94 (MQ=60)
                                CCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCC                                                            >  SRR4302543.7670244/1‑94 (MQ=60)
                                 CTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCA                                                           >  SRR4302543.3257246/1‑94 (MQ=60)
                                  TGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCAC                                                          <  SRR4302543.7269430/94‑1 (MQ=60)
                                  TGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCAC                                                          >  SRR4302543.1901340/1‑94 (MQ=60)
                                  TGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCAC                                                          >  SRR4302543.809488/1‑94 (MQ=60)
                                  TGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACAGCCCGGTATGGATTGGCAC                                                          >  SRR4302543.809489/1‑94 (MQ=60)
                                  TGAAAGTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCAC                                                          <  SRR4302543.7460313/94‑1 (MQ=60)
                                   GAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACC                                                         <  SRR4302543.1712887/94‑1 (MQ=60)
                                   GAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACC                                                         <  SRR4302543.2178254/94‑1 (MQ=60)
                                    AAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCA                                                        >  SRR4302543.2850584/1‑94 (MQ=60)
                                     AATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAG                                                       >  SRR4302543.7809455/1‑94 (MQ=60)
                                     AATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAG                                                       >  SRR4302543.1722589/1‑94 (MQ=60)
                                     AATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAG                                                       <  SRR4302543.4755236/94‑1 (MQ=60)
                                     AATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAG                                                       <  SRR4302543.7476833/94‑1 (MQ=60)
                                     AATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGGATGGATTGCCACCAG                                                       >  SRR4302543.1844783/1‑94 (MQ=60)
                                      ATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGGCACCCGC                                                      >  SRR4302543.5593797/1‑94 (MQ=60)
                                      ATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGGCACCAGC                                                      >  SRR4302543.4117897/1‑94 (MQ=60)
                                      ATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGC                                                      >  SRR4302543.2912150/1‑94 (MQ=60)
                                      ATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGC                                                      >  SRR4302543.4651459/1‑94 (MQ=60)
                                       TTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCA                                                     >  SRR4302543.6608117/1‑94 (MQ=60)
                                          GATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTC                                                  >  SRR4302543.137665/1‑94 (MQ=60)
                                          GATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTC                                                  >  SRR4302543.776732/1‑94 (MQ=60)
                                           ATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCA                                                 <  SRR4302543.7599582/94‑1 (MQ=60)
                                            TATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCAC                                                <  SRR4302543.6958037/94‑1 (MQ=60)
                                             ATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACG                                               >  SRR4302543.6593552/1‑94 (MQ=60)
                                               TTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAA                                             <  SRR4302543.3777818/94‑1 (MQ=60)
                                               TTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAA                                             >  SRR4302543.7302250/1‑94 (MQ=60)
                                                TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302543.7315872/94‑1 (MQ=60)
                                                TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302543.847238/94‑1 (MQ=60)
                                                TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302543.4866600/94‑1 (MQ=60)
                                                TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302543.2496291/94‑1 (MQ=60)
                                                TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302543.7530160/94‑1 (MQ=60)
                                                 CTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGG                                           <  SRR4302543.4248724/94‑1 (MQ=60)
                                                 CTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGG                                           <  SRR4302543.4645628/94‑1 (MQ=60)
                                                 CTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGG                                           >  SRR4302543.107974/1‑94 (MQ=60)
                                                  TGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGC                                          >  SRR4302543.684162/1‑94 (MQ=60)
                                                   GTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCG                                         >  SRR4302543.7405012/1‑94 (MQ=60)
                                                   GTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCG                                         <  SRR4302543.5714252/94‑1 (MQ=60)
                                                   GTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCG                                         <  SRR4302543.4431438/94‑1 (MQ=60)
                                                     AACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAA                                       >  SRR4302543.2949642/1‑94 (MQ=60)
                                                     AACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAA                                       >  SRR4302543.264022/1‑94 (MQ=60)
                                                      ACGGCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCTCCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAG                                      <  SRR4302543.2821378/94‑1 (MQ=60)
                                                      ACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAG                                      <  SRR4302543.6821048/94‑1 (MQ=60)
                                                       CGCCGCGGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGA                                     <  SRR4302543.7619942/94‑1 (MQ=60)
                                                       CGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGA                                     <  SRR4302543.441259/94‑1 (MQ=60)
                                                       CGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGA                                     <  SRR4302543.7348010/94‑1 (MQ=60)
                                                        GCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCCACACTCACGTAAGCGCAGAG                                    >  SRR4302543.5206028/1‑94 (MQ=60)
                                                        GCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAG                                    <  SRR4302543.4976982/94‑1 (MQ=60)
                                                        GCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAG                                    <  SRR4302543.996448/94‑1 (MQ=60)
                                                        GCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCACGGTATGGATTTCCACCAGCAATCACGAAGGCGAAGAG                                    >  SRR4302543.2873394/1‑94 (MQ=60)
                                                         CCGCAGTTGGCTGCTAAAGCCGTTACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGA                                   <  SRR4302543.4051690/94‑1 (MQ=60)
                                                         CCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGA                                   >  SRR4302543.2679373/1‑94 (MQ=60)
                                                          CTCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGACCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAG                                  <  SRR4302543.7985370/94‑1 (MQ=60)
                                                          CGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAG                                  <  SRR4302543.4411936/94‑1 (MQ=60)
                                                          CGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAG                                  <  SRR4302543.5059780/94‑1 (MQ=60)
                                                           GCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGT                                 <  SRR4302543.3742966/94‑1 (MQ=60)
                                                           GCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGT                                 <  SRR4302543.4122487/94‑1 (MQ=60)
                                                           GCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGG                                 >  SRR4302543.4467145/1‑94 (MQ=60)
                                                            CAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTG                                >  SRR4302543.2580296/1‑94 (MQ=60)
                                                            CAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTG                                <  SRR4302543.7700458/94‑1 (MQ=60)
                                                            CAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTG                                <  SRR4302543.5517681/94‑1 (MQ=60)
                                                             GGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGT                               <  SRR4302543.3196275/94‑1 (MQ=60)
                                                             AGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGT                               >  SRR4302543.985698/1‑94 (MQ=60)
                                                             AGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGG                               >  SRR4302543.5195747/1‑94 (MQ=60)
                                                              TTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACGCCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTG                              <  SRR4302543.4776525/94‑1 (MQ=60)
                                                              GTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTG                              <  SRR4302543.5322920/94‑1 (MQ=60)
                                                              GTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTG                              <  SRR4302543.4106726/94‑1 (MQ=60)
                                                              GTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTG                              <  SRR4302543.1997700/94‑1 (MQ=60)
                                                               TTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGG                             <  SRR4302543.4347839/94‑1 (MQ=60)
                                                                TGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGT                            <  SRR4302543.5826880/94‑1 (MQ=60)
                                                                TGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGT                            <  SRR4302543.2841350/94‑1 (MQ=60)
                                                                TGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGT                            <  SRR4302543.112542/94‑1 (MQ=60)
                                                                TGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGG                            >  SRR4302543.2153427/1‑94 (MQ=60)
                                                                 GGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTG                           <  SRR4302543.3886253/94‑1 (MQ=60)
                                                                 GGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTG                           >  SRR4302543.4481851/1‑94 (MQ=60)
                                                                 GGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTG                           <  SRR4302543.6034305/94‑1 (MQ=60)
                                                                  GCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGGGTGGTGA                          >  SRR4302543.2813580/1‑94 (MQ=60)
                                                                   CTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGAT                         <  SRR4302543.4351796/94‑1 (MQ=60)
                                                                   CTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGAT                         >  SRR4302543.5105473/1‑94 (MQ=60)
                                                                   CTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGAT                         >  SRR4302543.3735375/1‑94 (MQ=60)
                                                                   CTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGAT                         <  SRR4302543.1567829/94‑1 (MQ=60)
                                                                   CTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAAGCGAAGAGAGTGTGGTGAT                         >  SRR4302543.1032680/1‑94 (MQ=60)
                                                                    TGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATC                        >  SRR4302543.3849505/1‑94 (MQ=60)
                                                                    TGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATC                        >  SRR4302543.925542/1‑94 (MQ=60)
                                                                    TGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATC                        >  SRR4302543.4512672/1‑94 (MQ=60)
                                                                     GCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCG                       >  SRR4302543.3435110/1‑94 (MQ=60)
                                                                     GCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCG                       >  SRR4302543.694691/1‑94 (MQ=60)
                                                                     GCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGGGTGGTGATCG                       >  SRR4302543.1370149/1‑94 (MQ=60)
                                                                      CTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGC                      >  SRR4302543.1048731/1‑94 (MQ=60)
                                                                      CTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGGGATCGC                      >  SRR4302543.224208/1‑94 (MQ=60)
                                                                       TAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCC                     <  SRR4302543.30041/94‑1 (MQ=60)
                                                                       TAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCC                     >  SRR4302543.1621401/1‑94 (MQ=60)
                                                                        AAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTTCAGAAGGCGAAGAGAGTGTGGTGATCGTCG                    >  SRR4302543.872468/1‑94 (MQ=60)
                                                                        AAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGGGTGGGGTGATCGCCG                    >  SRR4302543.3301714/1‑94 (MQ=60)
                                                                        AAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCG                    <  SRR4302543.3648811/94‑1 (MQ=60)
                                                                        AAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCG                    >  SRR4302543.872467/1‑94 (MQ=60)
                                                                        AAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCG                    <  SRR4302543.2579903/94‑1 (MQ=60)
                                                                         AAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGCAGGCGAAGAGAGTGTGGTGATCGCCGC                   >  SRR4302543.4765823/1‑94 (MQ=60)
                                                                         AAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGC                   <  SRR4302543.667354/94‑1 (MQ=60)
                                                                         AAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGC                   <  SRR4302543.667356/94‑1 (MQ=60)
                                                                         AAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGC                   <  SRR4302543.4643029/94‑1 (MQ=60)
                                                                           GCCGTGACGCTGCGCTGCCAGTAGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCAC                 <  SRR4302543.4534395/94‑1 (MQ=60)
                                                                             CGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACTAAGGCGAAGAGAGAGTGGGGATCGCCGCACAC               >  SRR4302543.6285101/1‑94 (MQ=60)
                                                                             CGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACAT               <  SRR4302543.113586/94‑1 (MQ=60)
                                                                               TGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCA             <  SRR4302543.7246050/94‑1 (MQ=60)
                                                                               TGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCA             >  SRR4302543.2991362/1‑94 (MQ=60)
                                                                               TGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCA             <  SRR4302543.3237268/94‑1 (MQ=60)
                                                                               TGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCA             <  SRR4302543.5227080/94‑1 (MQ=60)
                                                                                GACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAG            <  SRR4302543.4381274/94‑1 (MQ=60)
                                                                                GACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAG            <  SRR4302543.7027096/94‑1 (MQ=60)
                                                                                 ACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGG           >  SRR4302543.941817/1‑94 (MQ=60)
                                                                                 ACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGG           <  SRR4302543.2484154/94‑1 (MQ=60)
                                                                                 ACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGG           <  SRR4302543.4971054/94‑1 (MQ=60)
                                                                                 ACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGG           <  SRR4302543.3942683/94‑1 (MQ=60)
                                                                                  CGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGC          <  SRR4302543.162919/94‑1 (MQ=60)
                                                                                  CGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGC          <  SRR4302543.3211042/94‑1 (MQ=60)
                                                                                  CGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGC          >  SRR4302543.969043/1‑94 (MQ=60)
                                                                                   GCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCA         <  SRR4302543.764675/94‑1 (MQ=60)
                                                                                   GCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCA         <  SRR4302543.4360396/94‑1 (MQ=60)
                                                                                   GCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCA         >  SRR4302543.4103414/1‑94 (MQ=60)
                                                                                    CTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCAT        <  SRR4302543.3972372/94‑1 (MQ=60)
                                                                                    CTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGAATGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCAT        >  SRR4302543.1890847/1‑94 (MQ=60)
                                                                                     TGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATT       <  SRR4302543.3749466/94‑1 (MQ=60)
                                                                                     TGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATT       >  SRR4302543.4970414/1‑94 (MQ=60)
                                                                                     TGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATT       <  SRR4302543.7606936/94‑1 (MQ=60)
                                                                                     TGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATT       <  SRR4302543.3733160/94‑1 (MQ=60)
                                                                                      GCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTG      >  SRR4302543.4074676/1‑94 (MQ=60)
                                                                                      GCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTG      <  SRR4302543.7217003/94‑1 (MQ=60)
                                                                                       CGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGT     >  SRR4302543.2371944/1‑94 (MQ=60)
                                                                                       CGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGT     >  SRR4302543.1411878/1‑94 (MQ=60)
                                                                                       CGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGT     <  SRR4302543.3036275/94‑1 (MQ=60)
                                                                                       CGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCAGTGT     >  SRR4302543.3910746/1‑94 (MQ=60)
                                                                                        GCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTT    >  SRR4302543.1611044/1‑94 (MQ=60)
                                                                                         CTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTA   >  SRR4302543.2536749/1‑94 (MQ=60)
                                                                                         CTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGGGTGGTGATCGCCGCACATCAGGCATTGTTA   >  SRR4302543.5963536/1‑94 (MQ=60)
                                                                                          TGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  >  SRR4302543.3006284/1‑94 (MQ=60)
                                                                                          TGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  <  SRR4302543.433346/94‑1 (MQ=60)
                                                                                          TGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  >  SRR4302543.5096243/1‑94 (MQ=60)
                                                                                          TGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  <  SRR4302543.1091957/94‑1 (MQ=60)
                                                                                          |                                                                                             
GCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  >  NC_000913/3806752‑3806935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑