Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,845,193	G→A	T354T (ACC→ACT)	uhpC ←	UhpC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,845,193	0	G	A	99.4%	1224.0 / ‑4.5	342	T354T (ACC→ACT)	uhpC	UhpC
Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (186/154); total (187/155)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.40e-01

Only 100 of 346 total aligned reads displayed.

CCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAAT  >  NC_000913/3845103‑3845282

  ccGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTga                                                                                       >  2:286701/1‑93 (MQ=255)

  ccGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTga                                                                                       <  1:3697471/93‑1 (MQ=255)

  ccGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTga                                                                                       >  2:859628/1‑93 (MQ=255)

  ccGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTga                                                                                       <  2:6785506/93‑1 (MQ=255)

   cGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTgaa                                                                                      >  2:2802360/1‑93 (MQ=255)

     tCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTgaaga                                                                                    <  1:4185730/93‑1 (MQ=255)

     tCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTgaaga                                                                                    <  2:2066226/93‑1 (MQ=255)

     tCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTgaaga                                                                                    >  1:6556915/1‑93 (MQ=255)

     tCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTgaaga                                                                                    <  1:1006600/93‑1 (MQ=255)

       gccgccCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGaagaag                                                                                  >  2:7139674/1‑93 (MQ=255)

       gccgccCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGaagaag                                                                                  >  2:7426719/1‑93 (MQ=255)

          gccCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAg                                                                               >  1:3162065/1‑93 (MQ=255)

           ccccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGTTTAACATCTTTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAgt                                                                              >  1:2337137/1‑92 (MQ=255)

           ccccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAgg                                                                              >  1:4100167/1‑93 (MQ=255)

           ccccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAgg                                                                              >  1:15147/1‑93 (MQ=255)

            cccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGt                                                                             >  1:3371265/1‑93 (MQ=255)

            cccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGt                                                                             >  1:3884289/1‑93 (MQ=255)

            cccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGt                                                                             >  1:998368/1‑93 (MQ=255)

             ccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGtt                                                                            <  2:3393280/93‑1 (MQ=255)

             ccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGtt                                                                            >  2:7808246/1‑93 (MQ=255)

              cTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTg                                                                           >  1:1650140/1‑93 (MQ=255)

              cTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTg                                                                           >  1:7536886/1‑93 (MQ=255)

              cTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTg                                                                           >  1:4892686/1‑93 (MQ=255)

                gccgccTCTTTGTGGGACCACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGcc                                                                         <  2:4146606/93‑1 (MQ=255)

                gccgccTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGcc                                                                         <  2:4441552/93‑1 (MQ=255)

                   gccTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGc                                                                      >  1:6198479/1‑93 (MQ=255)

                     ctctTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCAt                                                                    >  1:2831503/1‑93 (MQ=255)

                      tctTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATc                                                                   >  2:2661822/1‑93 (MQ=255)

                      tctTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATc                                                                   >  1:3228139/1‑93 (MQ=255)

                      tctTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATc                                                                   >  1:7189710/1‑93 (MQ=255)

                       ctTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCa                                                                  <  1:4576970/93‑1 (MQ=255)

                        tttGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCAc                                                                 <  2:1339157/93‑1 (MQ=255)

                           gtgGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTa                                                              <  1:5538981/93‑1 (MQ=255)

                            tgGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAg                                                             >  1:2434887/1‑93 (MQ=255)

                              ggAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCt                                                           <  2:959796/93‑1 (MQ=255)

                              ggAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCt                                                           <  1:2955655/93‑1 (MQ=255)

                               gAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTg                                                          <  1:6433681/93‑1 (MQ=255)

                               gAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTg                                                          <  1:6721823/93‑1 (MQ=255)

                               gAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTg                                                          <  2:3004535/93‑1 (MQ=255)

                                aaCACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTgg                                                         >  2:6332804/1‑93 (MQ=255)

                                 acacTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGc                                                        <  1:434675/93‑1 (MQ=255)

                                    ctctGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCaaa                                                     <  1:1070290/93‑1 (MQ=255)

                                    ctctGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCaaa                                                     <  2:5394748/93‑1 (MQ=255)

                                    ctctGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCaaa                                                     >  2:4958450/1‑93 (MQ=255)

                                    ctctGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCaaa                                                     >  2:3993761/1‑93 (MQ=255)

                                    ctctGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCaaa                                                     >  1:3804648/1‑93 (MQ=255)

                                      ctGCCGCCGCCATACCGATTAACATCTGTGGTCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATg                                                   <  1:3284032/93‑1 (MQ=255)

                                      ctGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATg                                                   <  1:7411900/93‑1 (MQ=255)

                                       tGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATgg                                                  >  2:2130384/1‑93 (MQ=255)

                                          cgccgccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCAt                                               <  2:3847978/93‑1 (MQ=255)

                                           gccgccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATc                                              >  2:347776/1‑93 (MQ=255)

                                           gccgccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATc                                              >  2:5478322/1‑93 (MQ=255)

                                           gccgccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATc                                              >  2:5971916/1‑93 (MQ=255)

                                           gccgccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATc                                              <  1:3532970/93‑1 (MQ=255)

                                            ccgccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCa                                             >  2:5719984/1‑93 (MQ=255)

                                             cgccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAg                                            >  1:2076098/1‑93 (MQ=255)

                                             cgccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAg                                            <  2:6473679/93‑1 (MQ=255)

                                              gccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGc                                           >  2:6038143/1‑93 (MQ=255)

                                                 aTACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCcac                                        <  2:721119/93‑1 (MQ=255)

                                                 aTACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCcac                                        >  2:1899663/1‑93 (MQ=255)

                                                  tACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCcaca                                       >  1:7687928/1‑93 (MQ=255)

                                                  tACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCcaca                                       >  1:4826530/1‑93 (MQ=255)

                                                  tACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCcaca                                       >  1:2229131/1‑93 (MQ=255)

                                                  tACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCcaca                                       >  1:1896245/1‑93 (MQ=255)

                                                   aCCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAg                                      >  1:2985529/1‑93 (MQ=255)

                                                    ccGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAgg                                     >  2:1242062/1‑93 (MQ=255)

                                                      gATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGa                                   >  2:2459034/1‑93 (MQ=255)

                                                      gATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGa                                   <  2:1554763/93‑1 (MQ=255)

                                                      gATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGa                                   <  1:2197439/93‑1 (MQ=255)

                                                      gATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGa                                   >  2:3548917/1‑93 (MQ=255)

                                                       aTTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAg                                  >  1:6856276/1‑93 (MQ=255)

                                                        ttAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGc                                 >  1:6005452/1‑93 (MQ=255)

                                                        ttAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGc                                 >  2:1423298/1‑93 (MQ=255)

                                                         tAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGcc                                >  1:7070263/1‑93 (MQ=255)

                                                          aaCATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCg                               >  2:3033525/1‑93 (MQ=255)

                                                            cATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGAc                             >  2:4651245/1‑93 (MQ=255)

                                                            cATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGAc                             >  2:6902852/1‑93 (MQ=255)

                                                            cATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGAc                             >  2:5573702/1‑93 (MQ=255)

                                                             aTCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACt                            <  2:528476/93‑1 (MQ=255)

                                                                 gtgGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGaaa                        <  2:4892997/93‑1 (MQ=255)

                                                                 gtgGGCCAAAGACAAAAAAACCAATAGGGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGaaa                        <  2:3348318/93‑1 (MQ=255)

                                                                     gtcAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCaa                    <  2:5159957/91‑1 (MQ=255)

                                                                       cAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCaaaa                  >  1:5184369/1‑93 (MQ=255)

                                                                       cAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCaaaa                  >  1:2542067/1‑93 (MQ=255)

                                                                       cAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCaaaa                  >  2:658064/1‑93 (MQ=255)

                                                                       cAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCaaaa                  <  1:3654120/93‑1 (MQ=255)

                                                                         aaGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAtt                >  1:471539/1‑93 (MQ=255)

                                                                         aaGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAtt                >  1:3490345/1‑93 (MQ=255)

                                                                          aGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTc               <  2:4763560/93‑1 (MQ=255)

                                                                          aGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTc               >  2:7816200/1‑93 (MQ=255)

                                                                            aCAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCcg             >  2:7489173/1‑93 (MQ=255)

                                                                              aaaaaacCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCcggc           <  1:544998/93‑1 (MQ=255)

                                                                              aaaaaaaCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGATCCGACTGAAAGCAAAATTCcggc           >  2:4313588/1‑93 (MQ=255)

                                                                              aaaaaaaCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCcggc           <  1:5650936/93‑1 (MQ=255)

                                                                                aaaaaCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCcggcgg         >  2:164847/1‑93 (MQ=255)

                                                                                aaaaaCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCcggcgg         >  1:7915953/1‑93 (MQ=255)

                                                                                    aCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGaa     >  1:6050016/1‑93 (MQ=255)

                                                                                    aCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGaa     >  1:7260082/1‑93 (MQ=255)

                                                                                     ccAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGaaa    >  1:4471803/1‑93 (MQ=255)

                                                                                       aaTAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAAt  >  2:1178309/1‑93 (MQ=255)

CCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAAT  >  NC_000913/3845103‑3845282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAATCAA  >  NC_000913/3845100‑3845285

AACCCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATA                                                                                              <  SRR4302543.3944368/94‑1 (MQ=60)

AAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAATATCTGTGGGCCAAAGACAAACAAACCAATA                                                                                              >  SRR4302543.5283837/1‑94 (MQ=60)

AAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATA                                                                                              <  SRR4302543.289773/94‑1 (MQ=60)

AAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATA                                                                                              >  SRR4302543.5283836/1‑94 (MQ=60)

AAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATA                                                                                              >  SRR4302543.3673233/1‑94 (MQ=60)

 ACCCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAG                                                                                             <  SRR4302543.672285/94‑1 (MQ=60)

 ACCCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAG                                                                                             <  SRR4302543.3736046/94‑1 (MQ=60)

 AACCCCGTCTCCCCCCCGGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAG                                                                                             <  SRR4302543.3736047/94‑1 (MQ=60)

 AACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAG                                                                                             >  SRR4302543.7333049/1‑94 (MQ=60)

 AACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAG                                                                                             <  SRR4302543.3296760/94‑1 (MQ=60)

 AACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAG                                                                                             <  SRR4302543.6204510/94‑1 (MQ=60)

  ACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGT                                                                                            <  SRR4302543.4630757/94‑1 (MQ=60)

  ACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGT                                                                                            <  SRR4302543.3919908/94‑1 (MQ=60)

  ACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGT                                                                                            <  SRR4302543.5687819/94‑1 (MQ=60)

   CCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACCCTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTG                                                                                           <  SRR4302543.1629753/94‑1 (MQ=60)

   CCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTG                                                                                           >  SRR4302543.4189716/1‑94 (MQ=60)

   CCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTG                                                                                           <  SRR4302543.7118690/94‑1 (MQ=60)

   CCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTG                                                                                           <  SRR4302543.4956008/94‑1 (MQ=60)

    CCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGA                                                                                          >  SRR4302543.3686377/1‑94 (MQ=60)

     CCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAA                                                                                         <  SRR4302543.2386957/94‑1 (MQ=60)

     CCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAA                                                                                         <  SRR4302543.3729977/94‑1 (MQ=60)

     CCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAA                                                                                         <  SRR4302543.2151204/94‑1 (MQ=60)

     CCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAA                                                                                         <  SRR4302543.5271589/94‑1 (MQ=60)

     CCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAA                                                                                         >  SRR4302543.3405574/1‑94 (MQ=60)

      CGTCCCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAG                                                                                        <  SRR4302543.6092269/94‑1 (MQ=60)

       GTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGA                                                                                       >  SRR4302543.744428/1‑94 (MQ=60)

       GTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGA                                                                                       >  SRR4302543.6618612/1‑94 (MQ=60)

       GTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGA                                                                                       >  SRR4302543.7395123/1‑94 (MQ=60)

       GGCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGA                                                                                       <  SRR4302543.5657290/94‑1 (MQ=60)

        TCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAA                                                                                      <  SRR4302543.1015504/94‑1 (MQ=60)

        GCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAA                                                                                      <  SRR4302543.2446706/94‑1 (MQ=60)

        CCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAA                                                                                      <  SRR4302543.4223675/94‑1 (MQ=60)

         CGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGTCAAAAAAACCAATAGTGAAGAAG                                                                                     <  SRR4302543.4670934/94‑1 (MQ=60)

         CGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAG                                                                                     <  SRR4302543.55372/94‑1 (MQ=60)

          GCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGC                                                                                    <  SRR4302543.3538296/94‑1 (MQ=60)

           CCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCA                                                                                   <  SRR4302543.4010032/94‑1 (MQ=60)

            CGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAG                                                                                  <  SRR4302543.1019593/94‑1 (MQ=60)

            CGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAG                                                                                  >  SRR4302543.3190532/1‑94 (MQ=60)

             GCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGTTTAACATCTTTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGT                                                                                 >  SRR4302543.2358342/1‑94 (MQ=60)

             GCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGG                                                                                 >  SRR4302543.4137018/1‑94 (MQ=60)

             GCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGG                                                                                 >  SRR4302543.15276/1‑94 (MQ=60)

             GCCCCTGCCGCCTCTTTGTGGAAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGG                                                                                 <  SRR4302543.7863051/94‑1 (MQ=60)

             CCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCTAAAGACAAAAAAACCAATAGTGAAGAAGCAGG                                                                                 <  SRR4302543.6601472/94‑1 (MQ=60)

              CCCCTGCGGCCTCTTTGTGGGAGCACTCTGCCGCCGCCAGACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGT                                                                                <  SRR4302543.729187/94‑1 (MQ=60)

              CCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGT                                                                                >  SRR4302543.6281047/1‑94 (MQ=60)

              CCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGT                                                                                >  SRR4302543.3918579/1‑94 (MQ=60)

              CCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGT                                                                                >  SRR4302543.3401544/1‑94 (MQ=60)

              CCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGT                                                                                >  SRR4302543.1007190/1‑94 (MQ=60)

               CCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTT                                                                               <  SRR4302543.6539031/94‑1 (MQ=60)

                CCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCCAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTG                                                                              >  SRR4302543.1860500/1‑94 (MQ=60)

                CCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTG                                                                              <  SRR4302543.316963/94‑1 (MQ=60)

                CCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTG                                                                              >  SRR4302543.7608743/1‑94 (MQ=60)

                CCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTG                                                                              >  SRR4302543.1664903/1‑94 (MQ=60)

                CCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTG                                                                              <  SRR4302543.6196888/94‑1 (MQ=60)

                CCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTG                                                                              >  SRR4302543.5133577/1‑94 (MQ=60)

                CCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTG                                                                              >  SRR4302543.4937289/1‑94 (MQ=60)

                CCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTG                                                                              <  SRR4302543.6064767/94‑1 (MQ=60)

                  TGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGAGAAGAAGCAGGTTGCC                                                                            >  SRR4302543.3290034/1‑94 (MQ=60)

                    CCGCGTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTG                                                                          <  SRR4302543.2988673/94‑1 (MQ=60)

                    CCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTG                                                                          <  SRR4302543.3237372/94‑1 (MQ=60)

                    CCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTG                                                                          <  SRR4302543.4708528/94‑1 (MQ=60)

                     CGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGC                                                                         >  SRR4302543.6257025/1‑94 (MQ=60)

                      GCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCA                                                                        >  SRR4302543.2382770/1‑94 (MQ=60)

                       CCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCAT                                                                       >  SRR4302543.2857406/1‑94 (MQ=60)

                       CCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCAC                                                                       >  SRR4302543.314019/1‑94 (MQ=60)

                        CTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATC                                                                      >  SRR4302543.3257327/1‑94 (MQ=60)

                        CTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATC                                                                      >  SRR4302543.3005230/1‑94 (MQ=60)

                        CTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATC                                                                      >  SRR4302543.4702543/1‑94 (MQ=60)

                        CTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATC                                                                      >  SRR4302543.7259448/1‑94 (MQ=60)

                        CTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATC                                                                      >  SRR4302543.1614239/1‑94 (MQ=60)

                          CTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCAC                                                                    <  SRR4302543.4618577/94‑1 (MQ=60)

                           TTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACG                                                                   <  SRR4302543.597310/94‑1 (MQ=60)

                             TGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTA                                                                 <  SRR4302543.4874194/94‑1 (MQ=60)

                             TGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTA                                                                 <  SRR4302543.5700479/94‑1 (MQ=60)

                              GTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAG                                                                <  SRR4302543.5589345/94‑1 (MQ=60)

                              GTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAG                                                                <  SRR4302543.6209641/94‑1 (MQ=60)

                              GTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAG                                                                >  SRR4302543.2456856/1‑94 (MQ=60)

                                 GGAACCCTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTG                                                             <  SRR4302543.925309/94‑1 (MQ=60)

                                 GGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTG                                                             >  SRR4302543.22366/1‑94 (MQ=60)

                                 GGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTG                                                             <  SRR4302543.2982490/94‑1 (MQ=60)

                                  GAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGG                                                            <  SRR4302543.6494300/94‑1 (MQ=60)

                                  GAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGG                                                            <  SRR4302543.6785348/94‑1 (MQ=60)

                                   AACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGC                                                           <  SRR4302543.2865696/94‑1 (MQ=60)

                                    ACGCTCCGCCGCCGCCATACCGATTAACATCTGTGGGCCAACGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCA                                                          <  SRR4302543.438749/94‑1 (MQ=60)

                                    ACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCA                                                          <  SRR4302543.438750/94‑1 (MQ=60)

                                     CACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAA                                                         >  SRR4302543.4420754/1‑94 (MQ=60)

                                      ACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAA                                                        >  SRR4302543.3838178/1‑94 (MQ=60)

                                      ACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAA                                                        >  SRR4302543.6941668/1‑94 (MQ=60)

                                      ACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAA                                                        >  SRR4302543.7172994/1‑94 (MQ=60)

                                       CTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAAT                                                       <  SRR4302543.1079909/94‑1 (MQ=60)

                                       CTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAAT                                                       >  SRR4302543.5566528/1‑94 (MQ=60)

                                       CTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAAT                                                       <  SRR4302543.4456339/94‑1 (MQ=60)

                                       CTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAAT                                                       <  SRR4302543.3798544/94‑1 (MQ=60)

                                       CTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAAT                                                       >  SRR4302543.3310494/1‑94 (MQ=60)

                                        TCTGCCGCCGCCATACCGATTAACATCGGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATG                                                      <  SRR4302543.7489279/94‑1 (MQ=60)

                                         CTGCCGCCGCCATACCGATTAACATCTGTGGTCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGG                                                     <  SRR4302543.3313673/94‑1 (MQ=60)

                                         CTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGG                                                     <  SRR4302543.6749230/94‑1 (MQ=60)

                                         CTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGG                                                     >  SRR4302543.3740590/1‑94 (MQ=60)

                                         CTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGG                                                     <  SRR4302543.7483015/94‑1 (MQ=60)

                                          TGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGC                                                    <  SRR4302543.4017328/94‑1 (MQ=60)

                                           GCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCA                                                   >  SRR4302543.4770804/1‑94 (MQ=60)

                                             CGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATC                                                 <  SRR4302543.2039781/94‑1 (MQ=60)

                                             CGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATC                                                 >  SRR4302543.3556894/1‑94 (MQ=60)

                                              GCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCA                                                <  SRR4302543.6632113/94‑1 (MQ=60)

                                              GCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCA                                                <  SRR4302543.3564416/94‑1 (MQ=60)

                                               CCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAG                                               >  SRR4302543.2094640/1‑94 (MQ=60)

                                               CCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAG                                               >  SRR4302543.27736/1‑94 (MQ=60)

                                               CCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAG                                               <  SRR4302543.3507584/94‑1 (MQ=60)

                                                  CCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCA                                            >  SRR4302543.7152891/1‑94 (MQ=60)

                                                   CATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCAC                                           >  SRR4302543.2224633/1‑94 (MQ=60)

                                                    ATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACA                                          >  SRR4302543.7760730/1‑94 (MQ=60)

                                                    ATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACA                                          >  SRR4302543.2249262/1‑94 (MQ=60)

                                                    ATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACA                                          >  SRR4302543.1913301/1‑94 (MQ=60)

                                                    ATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACA                                          >  SRR4302543.4870574/1‑94 (MQ=60)

                                                    ATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACA                                          >  SRR4302543.7720240/1‑94 (MQ=60)

                                                     TACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAG                                         >  SRR4302543.2323953/1‑94 (MQ=60)

                                                     TACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAG                                         >  SRR4302543.3012641/1‑94 (MQ=60)

                                                     TACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAG                                         <  SRR4302543.7484922/94‑1 (MQ=60)

                                                      ACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGG                                        <  SRR4302543.3509299/94‑1 (MQ=60)

                                                        CGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGA                                      >  SRR4302543.6070172/1‑94 (MQ=60)

                                                         GATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAG                                     >  SRR4302543.6920922/1‑94 (MQ=60)

                                                         GATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAG                                     >  SRR4302543.6920923/1‑94 (MQ=60)

                                                         GATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAG                                     <  SRR4302543.2217195/94‑1 (MQ=60)

                                                         GATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAG                                     >  SRR4302543.2657890/1‑94 (MQ=60)

                                                          ATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGC                                    >  SRR4302543.6060708/1‑94 (MQ=60)

                                                          ATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGC                                    >  SRR4302543.4535731/1‑94 (MQ=60)

                                                          ATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGC                                    >  SRR4302543.372614/1‑94 (MQ=60)

                                                          ATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGAATCAGCCACAGGGAGC                                    >  SRR4302543.3901175/1‑94 (MQ=60)

                                                           TTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCC                                   >  SRR4302543.7138913/1‑94 (MQ=60)

                                                           TTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCC                                   <  SRR4302543.993896/94‑1 (MQ=60)

                                                            TAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCG                                  <  SRR4302543.7282416/94‑1 (MQ=60)

                                                            TAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCG                                  >  SRR4302543.7683563/1‑94 (MQ=60)

                                                             AACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGA                                 >  SRR4302543.2125607/1‑94 (MQ=60)

                                                              ACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGAC                                >  SRR4302543.983753/1‑94 (MQ=60)

                                                               CATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACT                               >  SRR4302543.4153782/1‑94 (MQ=60)

                                                                ATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTG                              >  SRR4302543.6841658/1‑94 (MQ=60)

                                                                 TCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGA                             <  SRR4302543.2030784/94‑1 (MQ=60)

                                                                  CTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAA                            >  SRR4302543.2235838/1‑94 (MQ=60)

                                                                   TGTGGGCAAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAA                           <  SRR4302543.38087/94‑1 (MQ=60)

                                                                    GTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAG                          <  SRR4302543.3218384/94‑1 (MQ=60)

                                                                     TGGGCCAAAGACAAAAAAGCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGC                         <  SRR4302543.3307183/94‑1 (MQ=60)

                                                                     TGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGC                         <  SRR4302543.5677015/94‑1 (MQ=60)

                                                                      GGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCA                        <  SRR4302543.1492679/94‑1 (MQ=60)

                                                                      GGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCA                        >  SRR4302543.4317957/1‑94 (MQ=60)

                                                                        GCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAA                      <  SRR4302543.7218758/94‑1 (MQ=60)

                                                                         CCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAA                     >  SRR4302543.5231147/1‑94 (MQ=60)

                                                                         CCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAA                     >  SRR4302543.2565244/1‑94 (MQ=60)

                                                                          CAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAT                    >  SRR4302543.1975983/1‑94 (MQ=60)

                                                                          CAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAT                    <  SRR4302543.1024249/94‑1 (MQ=60)

                                                                          CAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAT                    <  SRR4302543.3686219/94‑1 (MQ=60)

                                                                          CAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAT                    >  SRR4302543.3354999/1‑94 (MQ=60)

                                                                          CAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAT                    >  SRR4302543.4070725/1‑94 (MQ=60)

                                                                          CAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAT                    <  SRR4302543.4765937/94‑1 (MQ=60)

                                                                          CAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAT                    >  SRR4302543.391283/1‑94 (MQ=60)

                                                                           AAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATT                   >  SRR4302543.6522652/1‑94 (MQ=60)

                                                                           AAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATT                   >  SRR4302543.7624249/1‑94 (MQ=60)

                                                                           AAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATT                   >  SRR4302543.475909/1‑94 (MQ=60)

                                                                           AAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATT                   >  SRR4302543.3521588/1‑94 (MQ=60)

                                                                           AAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATT                   >  SRR4302543.2942931/1‑94 (MQ=60)

                                                                             AGACAAAAAAACCAATAGTGAATAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCTACTGAAAGCAAAATTCC                 <  SRR4302543.4610362/94‑1 (MQ=60)

                                                                             AGACAAAAAAACCAATAGTGAAGAAGCAGTTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCC                 >  SRR4302543.2513364/1‑94 (MQ=60)

                                                                             AGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCC                 >  SRR4302543.3568128/1‑94 (MQ=60)

                                                                             AGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCC                 <  SRR4302543.3573883/94‑1 (MQ=60)

                                                                             AGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCC                 >  SRR4302543.189871/1‑94 (MQ=60)

                                                                              GACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCG                >  SRR4302543.603357/1‑94 (MQ=60)

                                                                              GACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCG                <  SRR4302543.3632092/94‑1 (MQ=60)

                                                                               ACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGG               <  SRR4302543.2750492/94‑1 (MQ=60)

                                                                                 AAAAAACCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCG             <  SRR4302543.550031/94‑1 (MQ=60)

                                                                                 AAAAAACCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCG             <  SRR4302543.4440578/94‑1 (MQ=60)

                                                                                 AAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCG             >  SRR4302543.5238328/1‑94 (MQ=60)

                                                                                 AAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCG             <  SRR4302543.3148486/94‑1 (MQ=60)

                                                                                 AAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCG             >  SRR4302543.3366568/1‑94 (MQ=60)

                                                                                 AAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCG             >  SRR4302543.232532/1‑94 (MQ=60)

                                                                                 AAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCG             <  SRR4302543.5702451/94‑1 (MQ=60)

                                                                                  AAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGG            >  SRR4302543.4871429/1‑94 (MQ=60)

                                                                                  AAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGG            <  SRR4302543.7344396/94‑1 (MQ=60)

                                                                                  AAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGG            >  SRR4302543.7990311/1‑94 (MQ=60)

                                                                                  AAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGG            >  SRR4302543.1376115/1‑94 (MQ=60)

                                                                                   AAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGG           >  SRR4302543.2503308/1‑94 (MQ=60)

                                                                                    AAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCG          <  SRR4302543.4887629/94‑1 (MQ=60)

                                                                                     AAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGA         >  SRR4302543.6332483/1‑94 (MQ=60)

                                                                                      AACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAA        >  SRR4302543.6872813/1‑94 (MQ=60)

                                                                                      AACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAA        >  SRR4302543.7330245/1‑94 (MQ=60)

                                                                                      AACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAA        >  SRR4302543.6107283/1‑94 (MQ=60)

                                                                                      AACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGAAAAATTCCcggggggaa        >  SRR4302543.1558753/1‑85 (MQ=60)

                                                                                       ACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAA       >  SRR4302543.4512362/1‑94 (MQ=60)

                                                                                         CAATGGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAGTCCGGCGGCGAAAAT     >  SRR4302543.7807097/1‑94 (MQ=60)

                                                                                         CAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAAT     >  SRR4302543.5343783/1‑94 (MQ=60)

                                                                                          AATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAATC    >  SRR4302543.4265246/1‑94 (MQ=60)

                                                                                           ATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAATCA   >  SRR4302543.6004079/1‑94 (MQ=60)

                                                                                           ATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAATCA   <  SRR4302543.7202197/94‑1 (MQ=60)

                                                                                           ATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAATCA   <  SRR4302543.7202196/94‑1 (MQ=60)

                                                                                           ATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAATCA   >  SRR4302543.333863/1‑94 (MQ=60)

                                                                                            TAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAATCAA  <  SRR4302543.1377380/94‑1 (MQ=60)

AAACCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAATCAA  >  NC_000913/3845100‑3845285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`