Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,857,968	T→C	L30S (TTA→TCA)	yidL →	putative ARAC‑type regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,857,968	0	T	C	99.5%	1374.5 / ‑4.3	429	L30S (TTA→TCA)	yidL	putative ARAC‑type regulatory protein
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (228/198); total (230/199)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.41e-01

Only 100 of 434 total aligned reads displayed.

TTGTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTTATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGC  >  NC_000913/3857878‑3858057

   tgAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGa                                                                                      >  1:1059527/1‑93 (MQ=255)

   tgAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGa                                                                                      >  1:4433292/1‑93 (MQ=255)

   tgAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGa                                                                                      <  1:6126606/93‑1 (MQ=255)

      gCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTa                                                                                   >  2:5978316/1‑93 (MQ=255)

       cATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTaa                                                                                  <  2:5002633/93‑1 (MQ=255)

         tAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACg                                                                                <  2:3848314/93‑1 (MQ=255)

         tAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACg                                                                                >  2:1921534/1‑93 (MQ=255)

         tAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACg                                                                                <  2:804142/93‑1 (MQ=255)

         tAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACg                                                                                <  1:136479/93‑1 (MQ=255)

          aaTTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGa                                                                               >  1:4278998/1‑93 (MQ=255)

            ttCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGaaa                                                                             <  2:4368802/93‑1 (MQ=255)

            ttCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGaaa                                                                             <  2:4040599/93‑1 (MQ=255)

               gCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATCCCCTCATTGATTAACGAAAAtg                                                                          <  1:748386/93‑1 (MQ=255)

                  ggAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGa                                                                       >  2:6597463/1‑93 (MQ=255)

                   gAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGAt                                                                      <  1:5880327/93‑1 (MQ=255)

                   gAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGAt                                                                      <  1:6455837/93‑1 (MQ=255)

                    aGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGAtc                                                                     <  1:5755690/93‑1 (MQ=255)

                     gggATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGAtct                                                                    >  1:1794765/1‑93 (MQ=255)

                     gggATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGAtct                                                                    >  1:3146427/1‑93 (MQ=255)

                      ggATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGAtctc                                                                   >  2:5155118/1‑93 (MQ=255)

                       gATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTcc                                                                  >  1:831905/1‑93 (MQ=255)

                        atatTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCa                                                                 <  1:7765661/93‑1 (MQ=255)

                        atatTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCa                                                                 <  2:4796821/93‑1 (MQ=255)

                         tatTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAg                                                                >  1:4539706/1‑93 (MQ=255)

                         tatTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAg                                                                >  2:568172/1‑93 (MQ=255)

                          atTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGc                                                               >  2:5173541/1‑93 (MQ=255)

                          atTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGc                                                               >  1:2131465/1‑93 (MQ=255)

                           ttAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCg                                                              >  2:2428622/1‑93 (MQ=255)

                              aaaTGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGaa                                                           >  2:1789910/1‑93 (MQ=255)

                              aaaTGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGaa                                                           >  2:6490397/1‑93 (MQ=255)

                              aaaTGAATGGAAAATTCCAAAGTTCAGATGTAAAAGACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGaa                                                           <  2:2851686/93‑1 (MQ=255)

                               aatgaatgGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAAt                                                          <  1:1185182/93‑1 (MQ=255)

                                 tgaatgGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAAttt                                                        >  1:459616/1‑93 (MQ=255)

                                 tgaatgGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAAttt                                                        >  1:399306/1‑93 (MQ=255)

                                  gaatgGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTtc                                                       <  2:4653737/93‑1 (MQ=255)

                                  gaatgGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTtc                                                       <  1:4205580/93‑1 (MQ=255)

                                    atgGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTtctc                                                     <  1:499754/93‑1 (MQ=255)

                                     tgGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTctct                                                    >  1:5404538/1‑93 (MQ=255)

                                     tgGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTctct                                                    >  2:1302373/1‑93 (MQ=255)

                                      ggaaaatggaaaatTTCAGATTTAAAAACCGAACCCCCGTAC‑ATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGa                                                  <  1:50277/93‑1 (MQ=255)

                                      ggAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGCACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTg                                                   >  2:6727631/1‑93 (MQ=255)

                                       gAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGa                                                  <  2:6157923/93‑1 (MQ=255)

                                       gAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGa                                                  <  2:1041355/93‑1 (MQ=255)

                                        aaaaTTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGAt                                                 <  1:1499977/93‑1 (MQ=255)

                                          aaTTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGAtct                                               >  1:5697672/1‑93 (MQ=255)

                                          aaTTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGAtct                                               >  2:5356530/1‑93 (MQ=255)

                                            atGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTTATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCg                                             <  2:883478/92‑1 (MQ=255)

                                             tGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGc                                            >  2:2972062/1‑93 (MQ=255)

                                              gCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGct                                           >  1:7027996/1‑93 (MQ=255)

                                                aaaGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGctct                                         >  2:5910696/1‑93 (MQ=255)

                                                   gTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGc                                      >  2:3580223/1‑93 (MQ=255)

                                                    ttCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCa                                     >  2:421234/1‑93 (MQ=255)

                                                    ttCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCa                                     >  1:6910344/1‑93 (MQ=255)

                                                    ttCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCa                                     >  2:2188104/1‑93 (MQ=255)

                                                     tCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCAt                                    >  1:7058240/1‑93 (MQ=255)

                                                       aGATGTGAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATAc                                  >  2:7785038/1‑93 (MQ=255)

                                                        gATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATTTCGCTCTGGCATAct                                 >  2:7210614/1‑92 (MQ=255)

                                                        gATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATAcc                                 <  2:1651948/93‑1 (MQ=255)

                                                        gATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATAcc                                 >  2:1114356/1‑93 (MQ=255)

                                                         aTGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCt                                <  1:1957947/93‑1 (MQ=255)

                                                          tGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTa                               <  2:2481996/93‑1 (MQ=255)

                                                          tGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTa                               >  2:7686899/1‑93 (MQ=255)

                                                           gTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTAc                              >  1:3906870/1‑93 (MQ=255)

                                                           gTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTAc                              >  2:2755086/1‑93 (MQ=255)

                                                            tAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACg                             >  1:7704445/1‑93 (MQ=255)

                                                            tAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACg                             >  2:342781/1‑93 (MQ=255)

                                                               aaaaCGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCcg                          <  2:2892185/93‑1 (MQ=255)

                                                               aaaaCGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCcg                          >  1:7836864/1‑93 (MQ=255)

                                                               aaaaCGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCcg                          >  1:2695908/1‑93 (MQ=255)

                                                                aaaCGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCcga                         >  1:1605816/1‑93 (MQ=255)

                                                                aaaCGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCcga                         >  2:5309135/1‑93 (MQ=255)

                                                                 aaCGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCcgac                        >  2:4514247/1‑93 (MQ=255)

                                                                  aCGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCcgacg                       <  2:7564032/93‑1 (MQ=255)

                                                                  aCGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCcgacg                       <  1:2468129/93‑1 (MQ=255)

                                                                   cGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCcgacga                      <  2:4153850/93‑1 (MQ=255)

                                                                    gAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAg                     >  1:3340134/1‑93 (MQ=255)

                                                                      aaCTCCGTACAATATTCCCTCATTTATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCa                   >  2:5734027/1‑93 (MQ=255)

                                                                      aaCTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCa                   >  1:7317422/1‑93 (MQ=255)

                                                                       aCTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCAt                  >  1:7204187/1‑93 (MQ=255)

                                                                       aCTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCAt                  >  2:7317642/1‑93 (MQ=255)

                                                                        cTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCAtt                 >  2:6987788/1‑93 (MQ=255)

                                                                        cTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCAtt                 <  1:1251731/93‑1 (MQ=255)

                                                                         tCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTa                <  1:530518/93‑1 (MQ=255)

                                                                           cGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTAcc              <  2:3192899/93‑1 (MQ=255)

                                                                             tataaTATTCCCTCATTGATTAACGAAAATGTGATCTCTAGCGGAATTTCTCTGATCGCGCTCTGGCATCCCTACGCCGACGAGCATTACCgg            <  2:1180935/90‑1 (MQ=255)

                                                                               cAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGt          >  1:5483015/1‑93 (MQ=255)

                                                                                 atatTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGa        >  1:4711200/1‑93 (MQ=255)

                                                                                  tatTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGAt       >  1:2884551/1‑93 (MQ=255)

                                                                                  tatTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGAt       >  2:2291505/1‑93 (MQ=255)

                                                                                  tatTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGAt       >  1:5666268/1‑93 (MQ=255)

                                                                                   atTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATc      <  2:2612313/93‑1 (MQ=255)

                                                                                   atTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATc      <  1:1916467/93‑1 (MQ=255)

                                                                                   atTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATc      <  1:5795459/93‑1 (MQ=255)

                                                                                   atTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATc      <  2:3736154/93‑1 (MQ=255)

                                                                                      cccTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTgg   >  1:3567774/1‑93 (MQ=255)

                                                                                      cccTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTgg   >  1:5200138/1‑93 (MQ=255)

                                                                                      cccTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTgg   <  2:3285597/93‑1 (MQ=255)

                                                                                       ccTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGc  >  2:5554244/1‑93 (MQ=255)

                                                                                       ccTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGc  >  1:2206679/1‑93 (MQ=255)

                                                                                       ccTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGc  >  1:6267604/1‑93 (MQ=255)

TTGTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTTATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGC  >  NC_000913/3857878‑3858057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 228 total aligned reads displayed.

GGTTGTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTTATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCCGCG  >  NC_000913/3857876‑3858061

GGTTGTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAACCTCCGTACAATATTCCCTCA                                                                                              >  SRR4302543.5631991/1‑94 (MQ=60)

GGTTGTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCA                                                                                              <  SRR4302543.6811644/94‑1 (MQ=60)

GGTTGTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCA                                                                                              >  SRR4302543.1172237/1‑94 (MQ=60)

 GTTGTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCAT                                                                                             >  SRR4302543.7348884/1‑94 (MQ=60)

 GTTGTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCAT                                                                                             <  SRR4302543.6473133/94‑1 (MQ=60)

  TTGTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATT                                                                                            <  SRR4302543.3175495/94‑1 (MQ=60)

    GTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGA                                                                                          >  SRR4302543.7337844/1‑94 (MQ=60)

    GTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGA                                                                                          >  SRR4302543.1069030/1‑94 (MQ=60)

    GTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGA                                                                                          >  SRR4302543.4473446/1‑94 (MQ=60)

    GTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGA                                                                                          >  SRR4302543.1164472/1‑94 (MQ=60)

     TGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGAT                                                                                         <  SRR4302543.6184633/94‑1 (MQ=60)

     TGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGAT                                                                                         >  SRR4302543.791078/1‑94 (MQ=60)

      GAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATT                                                                                        >  SRR4302543.3193616/1‑94 (MQ=60)

      GAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAAGTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATT                                                                                        <  SRR4302543.2353240/94‑1 (MQ=60)

       AGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTA                                                                                       >  SRR4302543.5441693/1‑94 (MQ=60)

       AGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACGCCGTACAATATTCCCTCATTGATTA                                                                                       <  SRR4302543.3968960/94‑1 (MQ=60)

        GCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAA                                                                                      >  SRR4302543.6305271/1‑94 (MQ=60)

         CATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAAC                                                                                     >  SRR4302543.5779142/1‑94 (MQ=60)

          ATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACG                                                                                    >  SRR4302543.511233/1‑94 (MQ=60)

          ATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACG                                                                                    >  SRR4302543.7221463/1‑94 (MQ=60)

           TAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGA                                                                                   >  SRR4302543.6448836/1‑94 (MQ=60)

           TAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGA                                                                                   >  SRR4302543.4317890/1‑94 (MQ=60)

           TAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGA                                                                                   <  SRR4302543.137681/94‑1 (MQ=60)

           TAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGA                                                                                   >  SRR4302543.4317889/1‑94 (MQ=60)

             ATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAA                                                                                 <  SRR4302543.4741818/94‑1 (MQ=60)

              TTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAA                                                                                >  SRR4302543.3161355/1‑94 (MQ=60)

               TCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAAT                                                                               <  SRR4302543.3964180/94‑1 (MQ=60)

                 GCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGT                                                                             <  SRR4302543.6183764/94‑1 (MQ=60)

                 GCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATCCCCTCATTGATTAACGAAAATGT                                                                             <  SRR4302543.755035/94‑1 (MQ=60)

                  ggGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTG                                                                            <  SRR4302543.1324821/92‑1 (MQ=60)

                    GGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGAT                                                                          >  SRR4302543.5072571/1‑94 (MQ=60)

                    GGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGAT                                                                          <  SRR4302543.5808555/94‑1 (MQ=60)

                    GGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGAT                                                                          >  SRR4302543.2125262/1‑94 (MQ=60)

                    GGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGAT                                                                          <  SRR4302543.3044158/94‑1 (MQ=60)

                     GAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATC                                                                         <  SRR4302543.3797774/94‑1 (MQ=60)

                     GAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATC                                                                         <  SRR4302543.2377929/94‑1 (MQ=60)

                     GAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATC                                                                         <  SRR4302543.6516664/94‑1 (MQ=60)

                     GAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATC                                                                         <  SRR4302543.5933914/94‑1 (MQ=60)

                      AGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCT                                                                        <  SRR4302543.5808138/94‑1 (MQ=60)

                      AGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCT                                                                        <  SRR4302543.4029609/94‑1 (MQ=60)

                      AGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCT                                                                        <  SRR4302543.3934498/94‑1 (MQ=60)

                      AGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCT                                                                        >  SRR4302543.3174725/1‑94 (MQ=60)

                      AGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCT                                                                        >  SRR4302543.1810828/1‑94 (MQ=60)

                      AGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCT                                                                        <  SRR4302543.5223784/94‑1 (MQ=60)

                       GGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTC                                                                       >  SRR4302543.2233043/1‑94 (MQ=60)

                        GGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCC                                                                      >  SRR4302543.839240/1‑94 (MQ=60)

                        GGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCC                                                                      >  SRR4302543.7026702/1‑94 (MQ=60)

                         GATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCA                                                                     <  SRR4302543.7289184/94‑1 (MQ=60)

                         GATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCA                                                                     <  SRR4302543.4681899/94‑1 (MQ=60)

                         GATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCA                                                                     <  SRR4302543.4256729/94‑1 (MQ=60)

                         GATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCA                                                                     <  SRR4302543.581785/94‑1 (MQ=60)

                          ATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAACCGAAACTCCGTACAATATTTCCTCATTGATTAACGAAAATGTGATCTCacg                                                                    >  SRR4302543.4581040/1‑91 (MQ=60)

                          ATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAG                                                                    <  SRR4302543.7838938/94‑1 (MQ=60)

                          ATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAG                                                                    >  SRR4302543.2217522/1‑94 (MQ=60)

                          ATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAG                                                                    <  SRR4302543.560305/94‑1 (MQ=60)

                          ATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAG                                                                    <  SRR4302543.7838939/94‑1 (MQ=60)

                          ATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAG                                                                    >  SRR4302543.175365/1‑94 (MQ=60)

                          ATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAG                                                                    <  SRR4302543.2679296/94‑1 (MQ=60)

                          ATATTAAAATGAATGGAAAATTGCAAAGTNCAGATNTAANAAACGAAACTCCGTACAATATTCCCTCANNGNNNNANGAAAATGNNANNNCNAG                                                                    >  SRR4302543.1294859/1‑94 (MQ=60)

                           TATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGC                                                                   >  SRR4302543.7481966/1‑94 (MQ=60)

                           TATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGC                                                                   >  SRR4302543.2150547/1‑94 (MQ=60)

                            ATTAAGATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCG                                                                  >  SRR4302543.7908921/1‑94 (MQ=60)

                            ATTAAAATTAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCG                                                                  <  SRR4302543.6815980/94‑1 (MQ=60)

                            ATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCG                                                                  <  SRR4302543.6170807/94‑1 (MQ=60)

                             TTAAAATGAATGGATAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGG                                                                 <  SRR4302543.7079900/94‑1 (MQ=60)

                             TTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGG                                                                 >  SRR4302543.2093846/1‑94 (MQ=60)

                             TTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGG                                                                 >  SRR4302543.3591935/1‑94 (MQ=60)

                             TTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGG                                                                 >  SRR4302543.2641584/1‑94 (MQ=60)

                              TAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGA                                                                >  SRR4302543.1541123/1‑94 (MQ=60)

                              TAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGA                                                                <  SRR4302543.1233399/94‑1 (MQ=60)

                              TAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGA                                                                >  SRR4302543.7731674/1‑94 (MQ=60)

                              TAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGA                                                                >  SRR4302543.7731673/1‑94 (MQ=60)

                                AAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAAT                                                              <  SRR4302543.1878391/94‑1 (MQ=60)

                                AAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAAT                                                              >  SRR4302543.4330782/1‑94 (MQ=60)

                                 AATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATT                                                             <  SRR4302543.1195880/94‑1 (MQ=60)

                                 AATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATT                                                             >  SRR4302543.4328325/1‑94 (MQ=60)

                                  ATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTT                                                            >  SRR4302543.7963272/1‑94 (MQ=60)

                                  ATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTT                                                            >  SRR4302543.574511/1‑94 (MQ=60)

                                  ATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTT                                                            >  SRR4302543.463889/1‑94 (MQ=60)

                                  ATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTT                                                            >  SRR4302543.402993/1‑94 (MQ=60)

                                  ATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTT                                                            >  SRR4302543.402994/1‑94 (MQ=60)

                                   TGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTC                                                           <  SRR4302543.5505525/94‑1 (MQ=60)

                                    GAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCT                                                          >  SRR4302543.4637345/1‑94 (MQ=60)

                                    GAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCT                                                          <  SRR4302543.5356494/94‑1 (MQ=60)

                                    GAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCT                                                          <  SRR4302543.1113996/94‑1 (MQ=60)

                                     AATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTC                                                         >  SRR4302543.4070923/1‑94 (MQ=60)

                                     AATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTC                                                         >  SRR4302543.5536350/1‑94 (MQ=60)

                                      ATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCT                                                        >  SRR4302543.5453671/1‑94 (MQ=60)

                                      ATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCT                                                        <  SRR4302543.504379/94‑1 (MQ=60)

                                      ATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCT                                                        <  SRR4302543.5017044/94‑1 (MQ=60)

                                        GGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGA                                                      <  SRR4302543.4495001/94‑1 (MQ=60)

                                        GGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGA                                                      <  SRR4302543.7582957/94‑1 (MQ=60)

                                          AAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATC                                                    <  SRR4302543.1513467/94‑1 (MQ=60)

                                           AAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCT                                                   <  SRR4302543.2151478/94‑1 (MQ=60)

                                           AAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCT                                                   >  SRR4302543.1214810/1‑94 (MQ=60)

                                           AAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCT                                                   >  SRR4302543.5749647/1‑94 (MQ=60)

                                           AAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCT                                                   >  SRR4302543.6457013/1‑94 (MQ=60)

                                             ATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCG                                                 >  SRR4302543.2902261/1‑94 (MQ=60)

                                               TGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCT                                               >  SRR4302543.7095475/1‑94 (MQ=60)

                                                 CAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCT                                             >  SRR4302543.7264144/1‑94 (MQ=60)

                                                 CAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCT                                             >  SRR4302543.2665936/1‑94 (MQ=60)

                                                   AAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGG                                           >  SRR4302543.4294267/1‑94 (MQ=60)

                                                     GTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGGATTTCTCTGATCGCGCTCTGGCA                                         >  SRR4302543.4024968/1‑94 (MQ=60)

                                                     GTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCA                                         >  SRR4302543.4604834/1‑94 (MQ=60)

                                                     GTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCA                                         >  SRR4302543.6975293/1‑94 (MQ=60)

                                                      TTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCAT                                        >  SRR4302543.5553340/1‑94 (MQ=60)

                                                      TTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCAT                                        <  SRR4302543.780283/94‑1 (MQ=60)

                                                      TTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCAT                                        <  SRR4302543.780284/94‑1 (MQ=60)

                                                      TTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCAT                                        <  SRR4302543.7849237/94‑1 (MQ=60)

                                                      TTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCAT                                        >  SRR4302543.7126738/1‑94 (MQ=60)

                                                       TCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATA                                       >  SRR4302543.5293137/1‑94 (MQ=60)

                                                        CAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATAC                                      >  SRR4302543.2769818/1‑94 (MQ=60)

                                                        CAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATAC                                      <  SRR4302543.376816/94‑1 (MQ=60)

                                                        CAGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATAC                                      <  SRR4302543.1266249/94‑1 (MQ=60)

                                                         AGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACC                                     <  SRR4302543.5471495/94‑1 (MQ=60)

                                                         AGATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACC                                     >  SRR4302543.5812425/1‑94 (MQ=60)

                                                          GATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCT                                    >  SRR4302543.7126065/1‑94 (MQ=60)

                                                           ATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTA                                   >  SRR4302543.6966492/1‑94 (MQ=60)

                                                           ATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTA                                   <  SRR4302543.1975511/94‑1 (MQ=60)

                                                           ATGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTA                                   <  SRR4302543.4539774/94‑1 (MQ=60)

                                                            TGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAGTTTCTCTGATCTCGCTCTGGCATACCTAC                                  <  SRR4302543.2727351/94‑1 (MQ=60)

                                                            TGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTAC                                  <  SRR4302543.4731786/94‑1 (MQ=60)

                                                            TGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTAC                                  >  SRR4302543.3941358/1‑94 (MQ=60)

                                                            TGTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTAC                                  <  SRR4302543.7158133/94‑1 (MQ=60)

                                                             GTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACG                                 <  SRR4302543.5451344/94‑1 (MQ=60)

                                                             GTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACG                                 <  SRR4302543.1938921/94‑1 (MQ=60)

                                                             GTAAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACG                                 <  SRR4302543.887509/94‑1 (MQ=60)

                                                               AAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCC                               <  SRR4302543.1695542/94‑1 (MQ=60)

                                                               AAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCC                               <  SRR4302543.5067539/94‑1 (MQ=60)

                                                               AAAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCC                               >  SRR4302543.3556846/1‑94 (MQ=60)

                                                                AAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCG                              >  SRR4302543.5459000/1‑94 (MQ=60)

                                                                AAAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCG                              >  SRR4302543.2720351/1‑94 (MQ=60)

                                                                 AAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGA                             >  SRR4302543.1620144/1‑94 (MQ=60)

                                                                 AAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGA                             >  SRR4302543.5862028/1‑94 (MQ=60)

                                                                 AAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGA                             >  SRR4302543.585590/1‑94 (MQ=60)

                                                                 AAAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGA                             >  SRR4302543.1143169/1‑94 (MQ=60)

                                                                  AAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGAC                            <  SRR4302543.89958/94‑1 (MQ=60)

                                                                  AAACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGAC                            <  SRR4302543.439585/94‑1 (MQ=60)

                                                                    ACGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGA                          <  SRR4302543.2490406/94‑1 (MQ=60)

                                                                     CGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAG                         >  SRR4302543.4623892/1‑94 (MQ=60)

                                                                     CGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAG                         <  SRR4302543.1419292/94‑1 (MQ=60)

                                                                     CGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAG                         <  SRR4302543.1455074/94‑1 (MQ=60)

                                                                     CGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAG                         >  SRR4302543.6054056/1‑94 (MQ=60)

                                                                     CGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAG                         <  SRR4302543.6055641/94‑1 (MQ=60)

                                                                     CGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAG                         >  SRR4302543.3370220/1‑94 (MQ=60)

                                                                     CGAAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCAGACGAG                         >  SRR4302543.7101399/1‑94 (MQ=60)

                                                                       AAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGTTCTCGCTCTGGCATACCTACGCCGACGAGCA                       >  SRR4302543.1788192/1‑94 (MQ=60)

                                                                       AAACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCA                       >  SRR4302543.7387921/1‑94 (MQ=60)

                                                                        AACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCAT                      >  SRR4302543.1886387/1‑94 (MQ=60)

                                                                        AACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCAT                      <  SRR4302543.7666237/94‑1 (MQ=60)

                                                                        AACTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCAT                      >  SRR4302543.7274034/1‑94 (MQ=60)

                                                                          acCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTA                    <  SRR4302543.5751415/92‑1 (MQ=60)

                                                                          CTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTA                    >  SRR4302543.3351219/1‑94 (MQ=60)

                                                                          CTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTA                    <  SRR4302543.1262954/94‑1 (MQ=60)

                                                                          CTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTA                    >  SRR4302543.678260/1‑94 (MQ=60)

                                                                          CTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTA                    <  SRR4302543.5318074/94‑1 (MQ=60)

                                                                          CTCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTA                    <  SRR4302543.5751414/94‑1 (MQ=60)

                                                                          CTCCGTACAATATGCCCTCTTTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCAATA                    <  SRR4302543.5751416/94‑1 (MQ=60)

                                                                           TCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGCGCATTAC                   >  SRR4302543.2069052/1‑94 (MQ=60)

                                                                           TCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTAC                   <  SRR4302543.1548741/94‑1 (MQ=60)

                                                                           TCCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTAC                   <  SRR4302543.535430/94‑1 (MQ=60)

                                                                            CCGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACC                  <  SRR4302543.7461347/94‑1 (MQ=60)

                                                                             CGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCG                 <  SRR4302543.7118923/94‑1 (MQ=60)

                                                                             CGTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACAG                 >  SRR4302543.6205571/1‑94 (MQ=60)

                                                                              GTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGG                >  SRR4302543.1351025/1‑94 (MQ=60)

                                                                              GTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGG                >  SRR4302543.1547583/1‑94 (MQ=60)

                                                                              GTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGG                >  SRR4302543.5733727/1‑94 (MQ=60)

                                                                              GTACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGG                >  SRR4302543.1351026/1‑94 (MQ=60)

                                                                                ACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGT              <  SRR4302543.194744/94‑1 (MQ=60)

                                                                                ACAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGT              >  SRR4302543.5532714/1‑94 (MQ=60)

                                                                                 CAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTG             >  SRR4302543.6421732/1‑94 (MQ=60)

                                                                                 CAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTG             >  SRR4302543.7831084/1‑94 (MQ=60)

                                                                                 CAATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTG             <  SRR4302543.3303975/94‑1 (MQ=60)

                                                                                 CAATATTCCCTCATTAATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTG             >  SRR4302543.1950186/1‑94 (MQ=60)

                                                                                  AATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGA            >  SRR4302543.4843928/1‑94 (MQ=60)

                                                                                  AATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGA            >  SRR4302543.4754253/1‑94 (MQ=60)

                                                                                   ATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGAT           >  SRR4302543.5717965/1‑94 (MQ=60)

                                                                                   ATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGAT           >  SRR4302543.4999112/1‑94 (MQ=60)

                                                                                   ATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGAT           >  SRR4302543.5069902/1‑94 (MQ=60)

                                                                                   ATATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGAT           >  SRR4302543.2910802/1‑94 (MQ=60)

                                                                                    TATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATC          >  SRR4302543.655687/1‑94 (MQ=60)

                                                                                    TATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATC          >  SRR4302543.7999051/1‑94 (MQ=60)

                                                                                     ATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCT         <  SRR4302543.5126070/94‑1 (MQ=60)

                                                                                     ATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCT         <  SRR4302543.1933743/94‑1 (MQ=60)

                                                                                     ATTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCT         <  SRR4302543.5848186/94‑1 (MQ=60)

                                                                                      TTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTG        >  SRR4302543.2175710/1‑94 (MQ=60)

                                                                                      TTCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTG        >  SRR4302543.427981/1‑94 (MQ=60)

                                                                                       TCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGG       >  SRR4302543.5247022/1‑94 (MQ=60)

                                                                                       TCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGG       >  SRR4302543.7947851/1‑94 (MQ=60)

                                                                                       TCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGG       <  SRR4302543.5099889/94‑1 (MQ=60)

                                                                                       TCCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGG       >  SRR4302543.3599327/1‑94 (MQ=60)

                                                                                        CCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGC      >  SRR4302543.2226554/1‑94 (MQ=60)

                                                                                        CCCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGC      >  SRR4302543.6326703/1‑94 (MQ=60)

                                                                                         CCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCG     >  SRR4302543.2911576/1‑94 (MQ=60)

                                                                                         CCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCC     >  SRR4302543.1658836/1‑94 (MQ=60)

                                                                                         CCTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCC     >  SRR4302543.2109859/1‑94 (MQ=60)

                                                                                          CTCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCCG    >  SRR4302543.6777144/1‑94 (MQ=60)

                                                                                           TCATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCCGC   >  SRR4302543.2593672/1‑94 (MQ=60)

                                                                                            CATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCCGCG  <  SRR4302543.4516084/94‑1 (MQ=60)

                                                                                            CATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCCGCG  >  SRR4302543.4376277/1‑94 (MQ=60)

GGTTGTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTTATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCCGCG  >  NC_000913/3857876‑3858061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`