Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,964,041	A→G	T4A (ACC→GCC)	rho →	transcription termination factor Rho

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,964,041	0	A	G	99.2%	1198.2 / ‑2.8	383	T4A (ACC→GCC)	rho	transcription termination factor Rho
Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (179/201); total (180/203)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 389 total aligned reads displayed.

TAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGAC  >  NC_000913/3963951‑3964130

tAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGcc                                                                                         >  1:3984938/1‑93 (MQ=255)

tAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGcc                                                                                         >  2:4567338/1‑93 (MQ=255)

  aaCAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGa                                                                                       >  2:2079408/1‑93 (MQ=255)

   aCAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGaa                                                                                      <  1:2545276/93‑1 (MQ=255)

   aCAGGCATGGAAGATCCAGCCATACCGTTCACAACATTGAGTTAGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGaa                                                                                      <  2:7045247/93‑1 (MQ=255)

    tcgtcATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAAt                                                                                     <  2:6474756/89‑1 (MQ=255)

    cAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAAt                                                                                     >  1:6737865/1‑93 (MQ=255)

      ggCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTa                                                                                   >  1:2864260/1‑93 (MQ=255)

        cATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTaaa                                                                                 <  2:1564884/93‑1 (MQ=255)

          tgaatgatCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGa                                                                               <  1:1500090/90‑1 (MQ=255)

          tGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGa                                                                               >  2:7686077/1‑93 (MQ=255)

          tGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGa                                                                               >  2:5958455/1‑93 (MQ=255)

           ggATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGaa                                                                              <  2:5447288/93‑1 (MQ=255)

           ggATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGaa                                                                              <  1:6281084/93‑1 (MQ=255)

            gatgatCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAAt                                                                             <  1:865225/93‑1 (MQ=255)

            gatgatCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCAAAGCTTAAGAACTCACACCACTATGAATCTCGCCGAATTACAGAAt                                                                             >  1:4591153/1‑93 (MQ=255)

              tgatCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATAc                                                                           >  2:5699965/1‑93 (MQ=255)

                 tCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGcc                                                                        >  1:618097/1‑93 (MQ=255)

                 tCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGcc                                                                        <  2:829542/93‑1 (MQ=255)

                  ccTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCg                                                                       <  1:114708/93‑1 (MQ=255)

                   cTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCgg                                                                      <  1:36401/93‑1 (MQ=255)

                    tGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGt                                                                     >  1:5324667/1‑93 (MQ=255)

                    tGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGt                                                                     >  1:5036685/1‑93 (MQ=255)

                    tGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGt                                                                     <  1:2004856/93‑1 (MQ=255)

                      ccATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGttt                                                                   >  1:3440738/1‑93 (MQ=255)

                       cATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTc                                                                  >  2:3357148/1‑93 (MQ=255)

                       cATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTc                                                                  <  2:299409/93‑1 (MQ=255)

                       cATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTc                                                                  <  1:309040/93‑1 (MQ=255)

                       cATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTc                                                                  >  1:6651605/1‑93 (MQ=255)

                       cATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTAAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTc                                                                  >  2:2404592/1‑93 (MQ=255)

                         tACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTg                                                                >  2:2005696/1‑93 (MQ=255)

                         tACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTg                                                                >  2:6187839/1‑93 (MQ=255)

                         tACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTg                                                                >  1:6308573/1‑93 (MQ=255)

                          aCCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGa                                                               <  1:1272288/93‑1 (MQ=255)

                            cATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGc                                                             <  1:7226154/93‑1 (MQ=255)

                             aTTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCt                                                            >  2:3988138/1‑93 (MQ=255)

                             aTTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCt                                                            <  1:3825923/93‑1 (MQ=255)

                              ttCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTg                                                           >  1:7367042/1‑93 (MQ=255)

                              ttCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTg                                                           >  2:172666/1‑93 (MQ=255)

                              ttCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTg                                                           >  2:7223395/1‑93 (MQ=255)

                              ttCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTg                                                           <  1:3208720/93‑1 (MQ=255)

                              ttCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTg                                                           >  2:3431537/1‑93 (MQ=255)

                                cacaACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGAt                                                         <  1:3326888/93‑1 (MQ=255)

                                 acaacaTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATc                                                        <  1:188404/93‑1 (MQ=255)

                                   aacaTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCAc                                                      >  2:5553256/1‑93 (MQ=255)

                                    acaTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCAct                                                     >  1:1408395/1‑93 (MQ=255)

                                      aTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCActct                                                   <  1:2698711/93‑1 (MQ=255)

                                      aTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCActct                                                   >  1:6986142/1‑93 (MQ=255)

                                       ttAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACtctc                                                  <  1:7615275/93‑1 (MQ=255)

                                       ttAAGTTCAAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACtctc                                                  <  2:7528263/93‑1 (MQ=255)

                                          aGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGc                                               >  2:498982/1‑93 (MQ=255)

                                           gTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCg                                              >  1:499359/1‑93 (MQ=255)

                                                agaTTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAat                                         >  2:5083339/1‑93 (MQ=255)

                                                 gaTTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAata                                        <  2:1425859/93‑1 (MQ=255)

                                                 gaTTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAata                                        <  1:2330867/93‑1 (MQ=255)

                                                 gaTTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAata                                        <  2:2197226/93‑1 (MQ=255)

                                                 gaTTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAata                                        >  2:7371267/1‑93 (MQ=255)

                                                   tttACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTNATCACTCTCGGCGAAAATATg                                      >  1:5968657/1‑93 (MQ=255)

                                                   tttACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATg                                      <  1:5844622/93‑1 (MQ=255)

                                                     tACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATggg                                    >  1:7834600/1‑93 (MQ=255)

                                                        cccAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCt                                 <  2:679171/93‑1 (MQ=255)

                                                         ccAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTg                                <  2:2929746/93‑1 (MQ=255)

                                                         ccAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTg                                >  2:7788911/1‑93 (MQ=255)

                                                           aaGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGa                              >  2:2695759/1‑93 (MQ=255)

                                                           aaGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGa                              >  2:183903/1‑93 (MQ=255)

                                                           aaGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGa                              <  2:1185430/93‑1 (MQ=255)

                                                            aGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGaa                             <  2:301601/93‑1 (MQ=255)

                                                               ttAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAAc                          <  2:4640669/93‑1 (MQ=255)

                                                                tAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAAcc                         <  2:1049045/93‑1 (MQ=255)

                                                                 aaGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCt                        <  2:4794054/93‑1 (MQ=255)

                                                                 aaGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCt                        <  2:4883733/93‑1 (MQ=255)

                                                                  aGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTg                       <  1:3511994/93‑1 (MQ=255)

                                                                  aGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTg                       <  1:5645542/93‑1 (MQ=255)

                                                                  aGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTg                       <  2:6685220/93‑1 (MQ=255)

                                                                  aGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTg                       <  2:5300750/93‑1 (MQ=255)

                                                                    aaCTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGc                     <  2:7452554/93‑1 (MQ=255)

                                                                    aaCTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGc                     <  2:2590528/93‑1 (MQ=255)

                                                                      cTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTc                   <  1:4297023/93‑1 (MQ=255)

                                                                       tCACGCCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCg                  <  2:5223036/93‑1 (MQ=255)

                                                                       tCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCAGGAAAACCTGGCTCg                  >  1:5445181/1‑93 (MQ=255)

                                                                         acacCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTa                <  1:492250/93‑1 (MQ=255)

                                                                         acacCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTa                <  2:6911755/93‑1 (MQ=255)

                                                                         acacCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTa                <  1:2102532/93‑1 (MQ=255)

                                                                         acacCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTa                <  2:6348752/93‑1 (MQ=255)

                                                                         acacCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTa                <  2:2318165/93‑1 (MQ=255)

                                                                          caccacTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTAt               <  1:1753916/93‑1 (MQ=255)

                                                                          caccacTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTAt               <  1:4114270/93‑1 (MQ=255)

                                                                            ccacTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGc             <  2:3684134/93‑1 (MQ=255)

                                                                             cacTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCg            >  1:7892089/1‑93 (MQ=255)

                                                                             cacTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCg            >  2:7848679/1‑93 (MQ=255)

                                                                               cTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTa          <  2:6611921/93‑1 (MQ=255)

                                                                               cTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTa          >  1:7017766/1‑93 (MQ=255)

                                                                               cTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTa          <  1:2775948/93‑1 (MQ=255)

                                                                                tATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGGATGCGTaa         >  2:3142443/1‑93 (MQ=255)

                                                                                 aTGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAg        <  1:160495/93‑1 (MQ=255)

                                                                                  tGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGc       >  1:2391025/1‑93 (MQ=255)

                                                                                   gAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCa      <  2:3242200/93‑1 (MQ=255)

                                                                                      tCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGa   >  1:6857421/1‑93 (MQ=255)

                                                                                      tCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGa   <  2:438324/93‑1 (MQ=255)

                                                                                      tCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGa   <  1:1079120/93‑1 (MQ=255)

TAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGAC  >  NC_000913/3963951‑3964130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATT  >  NC_000913/3963948‑3964133

CCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTG                                                                                              >  SRR4302543.3080218/1‑94 (MQ=60)

CCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTG                                                                                              >  SRR4302543.3731539/1‑94 (MQ=60)

CCGTAAACAGGCATGGATGATCCTGCCATACCAGTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTG                                                                                              <  SRR4302543.2813380/94‑1 (MQ=60)

 CGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGC                                                                                             >  SRR4302543.4107007/1‑94 (MQ=60)

 CGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGC                                                                                             >  SRR4302543.1292905/1‑94 (MQ=60)

  GTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCC                                                                                            <  SRR4302543.6931562/94‑1 (MQ=60)

  GTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCC                                                                                            >  SRR4302543.3580756/1‑94 (MQ=60)

  GTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCC                                                                                            >  SRR4302543.4020300/1‑94 (MQ=60)

  GTAAACAGGCATGGATGACCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCC                                                                                            <  SRR4302543.6048269/94‑1 (MQ=60)

    AAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGA                                                                                          >  SRR4302543.1314858/1‑94 (MQ=60)

    AAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGA                                                                                          <  SRR4302543.1542006/94‑1 (MQ=60)

      ACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAAT                                                                                        <  SRR4302543.2568492/94‑1 (MQ=60)

      ACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAAT                                                                                        <  SRR4302543.2818422/94‑1 (MQ=60)

      ACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAAT                                                                                        >  SRR4302543.5040082/1‑94 (MQ=60)

      ACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAAT                                                                                        >  SRR4302543.6801502/1‑94 (MQ=60)

       CAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATT                                                                                       >  SRR4302543.6315553/1‑94 (MQ=60)

        AGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTA                                                                                      >  SRR4302543.2890369/1‑94 (MQ=60)

         GGCAGGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAA                                                                                     <  SRR4302543.4136367/94‑1 (MQ=60)

          GCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAA                                                                                    <  SRR4302543.2771246/94‑1 (MQ=60)

          GCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAA                                                                                    >  SRR4302543.5925852/1‑94 (MQ=60)

          GCAGGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAA                                                                                    <  SRR4302543.210542/94‑1 (MQ=60)

           CATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAG                                                                                   <  SRR4302543.7542053/94‑1 (MQ=60)

            ATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGA                                                                                  >  SRR4302543.6217685/1‑94 (MQ=60)

            ATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGA                                                                                  >  SRR4302543.5080467/1‑94 (MQ=60)

            ATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGA                                                                                  >  SRR4302543.5973784/1‑94 (MQ=60)

            ATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGA                                                                                  >  SRR4302543.411500/1‑94 (MQ=60)

            ATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGA                                                                                  <  SRR4302543.6136575/94‑1 (MQ=60)

            ATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGA                                                                                  >  SRR4302543.4971134/1‑94 (MQ=60)

             gggatggaCCTGCCATACCATTCACATCATGAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACGCCACTATGAATCTTGCCGAATTAAAGAA                                                                                 <  SRR4302543.5445741/86‑1 (MQ=60)

             TGAATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAA                                                                                 <  SRR4302543.1513581/94‑1 (MQ=60)

              GGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAAT                                                                                <  SRR4302543.6340273/94‑1 (MQ=60)

              GGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCAAAGCTTAAGAACTCACACCACTATGAATCTCGCCGAATTACAGAAT                                                                                >  SRR4302543.4632855/1‑94 (MQ=60)

               GATGTCCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATA                                                                               <  SRR4302543.3095182/94‑1 (MQ=60)

               GATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATA                                                                               <  SRR4302543.2814354/94‑1 (MQ=60)

               GATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATA                                                                               <  SRR4302543.872960/94‑1 (MQ=60)

                ATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATAC                                                                              <  SRR4302543.5486750/94‑1 (MQ=60)

                ATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATAC                                                                              <  SRR4302543.7380035/94‑1 (MQ=60)

                ATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATAC                                                                              <  SRR4302543.3477229/94‑1 (MQ=60)

                ATGACCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATAC                                                                              <  SRR4302543.5370295/94‑1 (MQ=60)

                AGGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGGTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATAC                                                                              <  SRR4302543.5391884/94‑1 (MQ=60)

                 TGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACG                                                                             <  SRR4302543.7815351/94‑1 (MQ=60)

                 TGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACC                                                                             >  SRR4302543.2383347/1‑94 (MQ=60)

                  TATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGC                                                                            <  SRR4302543.6411168/94‑1 (MQ=60)

                  GATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGC                                                                            >  SRR4302543.1254920/1‑94 (MQ=60)

                   ATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCC                                                                           >  SRR4302543.3784915/1‑94 (MQ=60)

                   ATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCC                                                                           >  SRR4302543.623752/1‑94 (MQ=60)

                   ATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCC                                                                           >  SRR4302543.6483767/1‑94 (MQ=60)

                    TCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCG                                                                          >  SRR4302543.2353465/1‑94 (MQ=60)

                    TCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCG                                                                          <  SRR4302543.839509/94‑1 (MQ=60)

                    TCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCG                                                                          <  SRR4302543.3368864/94‑1 (MQ=60)

                     CCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGG                                                                         <  SRR4302543.115748/94‑1 (MQ=60)

                     CCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGG                                                                         <  SRR4302543.7420452/94‑1 (MQ=60)

                     CCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGG                                                                         <  SRR4302543.169927/94‑1 (MQ=60)

                     CCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGG                                                                         >  SRR4302543.5803060/1‑94 (MQ=60)

                      CTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGT                                                                        >  SRR4302543.3851968/1‑94 (MQ=60)

                      CTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGT                                                                        <  SRR4302543.36732/94‑1 (MQ=60)

                      CTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGT                                                                        >  SRR4302543.5372809/1‑94 (MQ=60)

                      CTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGT                                                                        >  SRR4302543.5082497/1‑94 (MQ=60)

                      CTGCCATACCATTCACAACATTAAGTACGAGAATTACCCCAAGTTTAAGAACTCACACCACAATGAATCTTGCCGAATAAAAGAATACGCCGGT                                                                        <  SRR4302543.7116613/94‑1 (MQ=60)

                       TGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTT                                                                       <  SRR4302543.2022868/94‑1 (MQ=60)

                        GCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTT                                                                      >  SRR4302543.1949138/1‑94 (MQ=60)

                        GCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTT                                                                      >  SRR4302543.3471539/1‑94 (MQ=60)

                         CCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTC                                                                     >  SRR4302543.6714401/1‑94 (MQ=60)

                          CATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCT                                                                    >  SRR4302543.1733750/1‑94 (MQ=60)

                          CATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCT                                                                    >  SRR4302543.4982903/1‑94 (MQ=60)

                          CATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCT                                                                    <  SRR4302543.311827/94‑1 (MQ=60)

                          CATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCT                                                                    >  SRR4302543.690795/1‑94 (MQ=60)

                           ATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTG                                                                   >  SRR4302543.90806/1‑94 (MQ=60)

                           ATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTG                                                                   >  SRR4302543.6367900/1‑94 (MQ=60)

                           ATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTG                                                                   >  SRR4302543.6779478/1‑94 (MQ=60)

                           ATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTG                                                                   >  SRR4302543.3574766/1‑94 (MQ=60)

                             ACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAG                                                                 <  SRR4302543.1283653/94‑1 (MQ=60)

                             ACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAG                                                                 >  SRR4302543.7846154/1‑94 (MQ=60)

                             ACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAG                                                                 <  SRR4302543.3270163/94‑1 (MQ=60)

                              CCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGC                                                                >  SRR4302543.1154144/1‑94 (MQ=60)

                               CATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCT                                                               <  SRR4302543.7296166/94‑1 (MQ=60)

                               CATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCT                                                               <  SRR4302543.6896119/94‑1 (MQ=60)

                                ATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTG                                                              >  SRR4302543.5061373/1‑94 (MQ=60)

                                ATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTG                                                              >  SRR4302543.3210929/1‑94 (MQ=60)

                                ATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTG                                                              >  SRR4302543.7437880/1‑94 (MQ=60)

                                ATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTG                                                              >  SRR4302543.1194933/1‑94 (MQ=60)

                                ATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTG                                                              <  SRR4302543.3859668/94‑1 (MQ=60)

                                 TTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGA                                                             >  SRR4302543.6892957/1‑94 (MQ=60)

                                 TTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGA                                                             <  SRR4302543.3589259/94‑1 (MQ=60)

                                 TTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGA                                                             <  SRR4302543.3237679/94‑1 (MQ=60)

                                 TTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGA                                                             >  SRR4302543.6152628/1‑94 (MQ=60)

                                  TCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGAT                                                            <  SRR4302543.7059789/94‑1 (MQ=60)

                                   CACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATC                                                           >  SRR4302543.7267674/1‑94 (MQ=60)

                                   CACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATC                                                           >  SRR4302543.1862754/1‑94 (MQ=60)

                                   CACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATC                                                           <  SRR4302543.1492686/94‑1 (MQ=60)

                                   CACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATC                                                           <  SRR4302543.3356897/94‑1 (MQ=60)

                                    ACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCA                                                          <  SRR4302543.190002/94‑1 (MQ=60)

                                      AACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACT                                                        >  SRR4302543.1421120/1‑94 (MQ=60)

                                       ACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTC                                                       >  SRR4302543.6747615/1‑94 (MQ=60)

                                       ACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTC                                                       >  SRR4302543.994648/1‑94 (MQ=60)

                                       ACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTC                                                       <  SRR4302543.5574414/94‑1 (MQ=60)

                                        CATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCT                                                      >  SRR4302543.5630124/1‑94 (MQ=60)

                                        CATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCT                                                      <  SRR4302543.3181301/94‑1 (MQ=60)

                                        CATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCT                                                      >  SRR4302543.7051893/1‑94 (MQ=60)

                                        CATTAAGTACGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCT                                                      >  SRR4302543.4915929/1‑94 (MQ=60)

                                         ATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTC                                                     >  SRR4302543.4084995/1‑94 (MQ=60)

                                         ATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTC                                                     >  SRR4302543.7946715/1‑94 (MQ=60)

                                         ATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTC                                                     <  SRR4302543.2723183/94‑1 (MQ=60)

                                          TTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCG                                                    >  SRR4302543.5527001/1‑94 (MQ=60)

                                          TTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCG                                                    <  SRR4302543.7687572/94‑1 (MQ=60)

                                          TTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCG                                                    <  SRR4302543.1899020/94‑1 (MQ=60)

                                           TAAGTTCGATATTTACCGCAAGTTTAAGAACTCACACGACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGG                                                   <  SRR4302543.5432313/94‑1 (MQ=60)

                                           TAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGG                                                   >  SRR4302543.161004/1‑94 (MQ=60)

                                            AAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGC                                                  <  SRR4302543.3926969/94‑1 (MQ=60)

                                            AAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGC                                                  <  SRR4302543.4322188/94‑1 (MQ=60)

                                             AGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCG                                                 >  SRR4302543.1381513/1‑94 (MQ=60)

                                             AGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCG                                                 <  SRR4302543.3821737/94‑1 (MQ=60)

                                             AGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCG                                                 <  SRR4302543.7934300/94‑1 (MQ=60)

                                             AGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCG                                                 >  SRR4302543.503979/1‑94 (MQ=60)

                                             AGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCG                                                 >  SRR4302543.95424/1‑94 (MQ=60)

                                              GTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGA                                                >  SRR4302543.2367048/1‑94 (MQ=60)

                                                TCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAA                                              >  SRR4302543.7525923/1‑94 (MQ=60)

                                                TCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAA                                              >  SRR4302543.2528663/1‑94 (MQ=60)

                                                  GAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAAT                                            >  SRR4302543.6935517/1‑94 (MQ=60)

                                                  GAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAAT                                            <  SRR4302543.6763458/94‑1 (MQ=60)

                                                    GATTTACCCCAAGTTTAAGAACTCACACCACTATGACTCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATAT                                          <  SRR4302543.3978996/94‑1 (MQ=60)

                                                    GATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATAT                                          <  SRR4302543.2352024/94‑1 (MQ=60)

                                                    GATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATAT                                          <  SRR4302543.2328441/94‑1 (MQ=60)

                                                    GATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATAT                                          >  SRR4302543.2848652/1‑94 (MQ=60)

                                                    GATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATAT                                          <  SRR4302543.1783032/94‑1 (MQ=60)

                                                    GATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATAT                                          <  SRR4302543.3978995/94‑1 (MQ=60)

                                                     ATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTNATCACTCTCGGCGAAAATATG                                         >  SRR4302543.6023315/1‑94 (MQ=60)

                                                      TTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGG                                        <  SRR4302543.5897799/94‑1 (MQ=60)

                                                      TTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGG                                        <  SRR4302543.6264640/94‑1 (MQ=60)

                                                       TTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGG                                       <  SRR4302543.1155942/94‑1 (MQ=60)

                                                       TTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGG                                       >  SRR4302543.7908355/1‑94 (MQ=60)

                                                        TACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGG                                      >  SRR4302543.7428296/1‑94 (MQ=60)

                                                          CCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCT                                    <  SRR4302543.6981375/94‑1 (MQ=60)

                                                             CAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGA                                 >  SRR4302543.7981616/1‑94 (MQ=60)

                                                             CAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGA                                 >  SRR4302543.4243564/1‑94 (MQ=60)

                                                             CAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGA                                 <  SRR4302543.3424527/94‑1 (MQ=60)

                                                             CAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGA                                 >  SRR4302543.2698833/1‑94 (MQ=60)

                                                              AAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAA                                >  SRR4302543.3334480/1‑94 (MQ=60)

                                                              AAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAA                                >  SRR4302543.6260138/1‑94 (MQ=60)

                                                                 TTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAACATATGGGGCTGGAAAAC                             >  SRR4302543.7962623/1‑94 (MQ=60)

                                                                 TTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAAC                             <  SRR4302543.5844398/94‑1 (MQ=60)

                                                                  TTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACC                            >  SRR4302543.322334/1‑94 (MQ=60)

                                                                   TAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCT                           >  SRR4302543.1521997/1‑94 (MQ=60)

                                                                   TAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCT                           <  SRR4302543.6937804/94‑1 (MQ=60)

                                                                   TAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCT                           >  SRR4302543.117881/1‑94 (MQ=60)

                                                                     AGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGG                         <  SRR4302543.7200976/94‑1 (MQ=60)

                                                                     AGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGG                         <  SRR4302543.3543371/94‑1 (MQ=60)

                                                                     AGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGG                         <  SRR4302543.5697005/94‑1 (MQ=60)

                                                                       AACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCT                       <  SRR4302543.634324/94‑1 (MQ=60)

                                                                         CTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCG                     <  SRR4302543.4336077/94‑1 (MQ=60)

                                                                         CTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCG                     <  SRR4302543.1742796/94‑1 (MQ=60)

                                                                         CTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCG                     >  SRR4302543.1960600/1‑94 (MQ=60)

                                                                         CTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCAGGAAAACCTGGCTCG                     >  SRR4302543.5494598/1‑94 (MQ=60)

                                                                           CACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTA                   >  SRR4302543.4435449/1‑94 (MQ=60)

                                                                           CACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTA                   >  SRR4302543.7971312/1‑94 (MQ=60)

                                                                            CCACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTAT                  <  SRR4302543.2508049/94‑1 (MQ=60)

                                                                            ACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTAT                  <  SRR4302543.496796/94‑1 (MQ=60)

                                                                            ACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTAT                  <  SRR4302543.2121351/94‑1 (MQ=60)

                                                                            ACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTAT                  <  SRR4302543.3477413/94‑1 (MQ=60)

                                                                            ACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTAT                  <  SRR4302543.2607111/94‑1 (MQ=60)

                                                                            ACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTAT                  <  SRR4302543.6006301/94‑1 (MQ=60)

                                                                            ACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTAT                  <  SRR4302543.3095129/94‑1 (MQ=60)

                                                                             CACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATG                 <  SRR4302543.4151329/94‑1 (MQ=60)

                                                                             CACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATG                 >  SRR4302543.216121/1‑94 (MQ=60)

                                                                             CACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATG                 <  SRR4302543.1469297/94‑1 (MQ=60)

                                                                             CACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATG                 <  SRR4302543.1769581/94‑1 (MQ=60)

                                                                               CCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCG               >  SRR4302543.7966309/1‑94 (MQ=60)

                                                                                CACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGT              <  SRR4302543.442013/94‑1 (MQ=60)

                                                                                CACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGT              >  SRR4302543.510938/1‑94 (MQ=60)

                                                                                CACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGT              >  SRR4302543.2756916/1‑94 (MQ=60)

                                                                                CACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGT              >  SRR4302543.5367645/1‑94 (MQ=60)

                                                                                 ACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTA             >  SRR4302543.7084869/1‑94 (MQ=60)

                                                                                 ACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTA             >  SRR4302543.1328386/1‑94 (MQ=60)

                                                                                  CTATTAATCTTGCCGAATTAAAGAATACGTCGGTTTCTGAGCTGATCCCTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAA            <  SRR4302543.2800949/94‑1 (MQ=60)

                                                                                  CTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAA            <  SRR4302543.2801222/94‑1 (MQ=60)

                                                                                  CTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAA            <  SRR4302543.7438282/94‑1 (MQ=60)

                                                                                   TATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGTAAAACCTGGCTCGTATGCGTAAG           <  SRR4302543.2458739/94‑1 (MQ=60)

                                                                                   TATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAG           >  SRR4302543.1509265/1‑94 (MQ=60)

                                                                                   TATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAG           <  SRR4302543.706564/94‑1 (MQ=60)

                                                                                   TATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAG           >  SRR4302543.3256178/1‑94 (MQ=60)

                                                                                    ATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGTAAAACCTGGCTCGTATGCGTAAGC          <  SRR4302543.4650663/94‑1 (MQ=60)

                                                                                    ATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGC          >  SRR4302543.2412662/1‑94 (MQ=60)

                                                                                    ATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGC          <  SRR4302543.161870/94‑1 (MQ=60)

                                                                                     TGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCA         <  SRR4302543.2097975/94‑1 (MQ=60)

                                                                                     TGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCA         >  SRR4302543.2051794/1‑94 (MQ=60)

                                                                                      GAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAG        <  SRR4302543.2933205/94‑1 (MQ=60)

                                                                                       AATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGG       <  SRR4302543.4778939/94‑1 (MQ=60)

                                                                                       AATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGG       <  SRR4302543.4289281/94‑1 (MQ=60)

                                                                                       AATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGG       <  SRR4302543.5751958/94‑1 (MQ=60)

                                                                                        ATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGA      >  SRR4302543.6922069/1‑94 (MQ=60)

                                                                                        ATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGA      >  SRR4302543.347404/1‑94 (MQ=60)

                                                                                        ATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGA      >  SRR4302543.6701055/1‑94 (MQ=60)

                                                                                        ATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGA      >  SRR4302543.6353556/1‑94 (MQ=60)

                                                                                        ATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGA      >  SRR4302543.2629076/1‑94 (MQ=60)

                                                                                         TCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGAC     <  SRR4302543.1993863/94‑1 (MQ=60)

                                                                                         TCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGAC     <  SRR4302543.1088822/94‑1 (MQ=60)

                                                                                         TCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGAC     <  SRR4302543.4367668/94‑1 (MQ=60)

                                                                                          CTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACA    <  SRR4302543.305875/94‑1 (MQ=60)

                                                                                           TTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACAT   >  SRR4302543.5100671/1‑94 (MQ=60)

                                                                                            TGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATT  <  SRR4302543.4446709/94‑1 (MQ=60)

CCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATT  >  NC_000913/3963948‑3964133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`