Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,275,617 A→G intergenic (+105/‑441) soxR → / → yjcD SoxR/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,275,6170AG98.9% 1164.3 / ‑0.4 378intergenic (+105/‑441)soxR/yjcDSoxR/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (2/2);  new base G (166/208);  total (168/210)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01

Only 100 of 395 total aligned reads displayed.

GCTTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCACGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCAA  >  NC_000913/4275527‑4275706
                                                                                          |                                                                                         
  tttAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCgtg                                                                                       >  1:3499854/1‑93 (MQ=255)
  tttAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCgtc                                                                                       <  2:4797962/93‑2 (MQ=255)
   ttAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCgtgg                                                                                      >  2:79818/1‑93 (MQ=255)
   ttAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCgtgg                                                                                      >  2:7318565/1‑93 (MQ=255)
    tAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCgtggt                                                                                     >  1:4777295/1‑93 (MQ=255)
    tAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCgtggt                                                                                     <  2:3518356/93‑1 (MQ=255)
    tAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCgtggt                                                                                     <  2:6849306/93‑1 (MQ=255)
    tAGTTTGTGTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTATACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCgtggt                                                                                     <  2:3879606/93‑1 (MQ=255)
     aGTTTGTTGTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCgtggtg                                                                                    <  2:1428443/93‑1 (MQ=255)
      gtttgtttTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGtggtgg                                                                                   <  1:2697602/93‑1 (MQ=255)
      gtttgtttTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGtggtgg                                                                                   >  1:4866180/1‑93 (MQ=255)
      gtttgtttTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGtggtgg                                                                                   >  1:3330872/1‑93 (MQ=255)
       ttttttttCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGa                                                                                  <  1:1887897/93‑1 (MQ=255)
       tttgtttTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGa                                                                                  <  1:891376/93‑1 (MQ=255)
        ttgtttTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAg                                                                                 <  2:4548262/93‑1 (MQ=255)
        ttgtttTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAg                                                                                 <  1:4621822/93‑1 (MQ=255)
          gtttTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGt                                                                               >  2:3595895/1‑93 (MQ=255)
            tttCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTc                                                                             <  2:3666177/93‑1 (MQ=255)
            tttCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTc                                                                             <  1:1565634/93‑1 (MQ=255)
             ttCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTcc                                                                            >  2:585696/1‑93 (MQ=255)
              tCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCg                                                                           <  1:2869870/93‑1 (MQ=255)
                 ggTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGtt                                                                        <  2:428174/93‑1 (MQ=255)
                  gtctttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTg                                                                       >  1:4398146/1‑93 (MQ=255)
                  gtctttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGGTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTg                                                                       >  2:6044417/1‑93 (MQ=255)
                   tctttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTgg                                                                      >  2:5586945/1‑93 (MQ=255)
                   tctttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTgg                                                                      <  2:4986220/93‑1 (MQ=255)
                    ctttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTggg                                                                     >  1:1737709/1‑92 (MQ=255)
                    ctttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGgt                                                                     >  2:3952318/1‑93 (MQ=255)
                    ctttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGgt                                                                     >  1:1276589/1‑93 (MQ=255)
                    ctttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGgt                                                                     <  2:7482861/93‑1 (MQ=255)
                     tttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGgtg                                                                    >  2:5551997/1‑93 (MQ=255)
                     tttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGgtg                                                                    <  1:6506696/93‑1 (MQ=255)
                      ttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGgtgt                                                                   <  2:5362093/93‑1 (MQ=255)
                      ttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGgtgt                                                                   >  1:6190457/1‑93 (MQ=255)
                      ttgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGgtgt                                                                   >  1:6424425/1‑93 (MQ=255)
                       tgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGtt                                                                  <  1:1046400/93‑1 (MQ=255)
                       tgtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGtt                                                                  <  1:7276904/93‑1 (MQ=255)
                        gtctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTg                                                                 >  1:3775908/1‑93 (MQ=255)
                         tctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGa                                                                <  1:196624/93‑1 (MQ=255)
                          ctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGAt                                                               >  2:6829749/1‑93 (MQ=255)
                          ctttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGAt                                                               <  2:723129/93‑1 (MQ=255)
                           tttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGGGGGTCCGGTTGGTGTTGATg                                                              >  1:3138129/1‑93 (MQ=255)
                           tttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATg                                                              >  2:2624930/1‑93 (MQ=255)
                            ttCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGc                                                             <  2:2021267/93‑1 (MQ=255)
                                ctctATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTa                                                         >  1:7157340/1‑93 (MQ=255)
                                ctctATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTa                                                         >  2:3324251/1‑93 (MQ=255)
                                ctctATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTa                                                         <  2:4890876/93‑1 (MQ=255)
                                 tctATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTaa                                                        <  1:2652742/93‑1 (MQ=255)
                                  ctATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAAt                                                       <  2:1579119/93‑1 (MQ=255)
                                   tATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAAtt                                                      <  1:5525622/93‑1 (MQ=255)
                                   tATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAAtt                                                      >  1:7379150/1‑93 (MQ=255)
                                    aTCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGGGGTTCCGGTTGGTGTTGATGCTTTAAtgg                                                     >  1:1802866/1‑91 (MQ=255)
                                    aTCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTg                                                     <  1:1354489/93‑1 (MQ=255)
                                    aTCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTg                                                     >  2:4658552/1‑93 (MQ=255)
                                    aTCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTg                                                     <  1:2403568/93‑1 (MQ=255)
                                    aTCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTg                                                     >  1:7774527/1‑93 (MQ=255)
                                     tCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGt                                                    >  2:7456742/1‑93 (MQ=255)
                                      cccGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTa                                                   <  2:6953203/93‑1 (MQ=255)
                                       ccGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTAt                                                  <  1:4184024/93‑1 (MQ=255)
                                          gtGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTc                                               <  2:5703990/92‑1 (MQ=255)
                                          cTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTc                                               <  1:4053739/93‑1 (MQ=255)
                                           tGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCa                                              >  2:517570/1‑93 (MQ=255)
                                           tGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCa                                              <  2:1056757/93‑1 (MQ=255)
                                            ggTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCAc                                             >  2:2178773/1‑93 (MQ=255)
                                             gTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCAcc                                            <  2:6007603/93‑1 (MQ=255)
                                              tACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCg                                           >  1:6097762/1‑93 (MQ=255)
                                               acacAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGa                                          <  1:6919257/93‑1 (MQ=255)
                                                 acaGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACg                                        <  2:1768233/93‑1 (MQ=255)
                                                   aggaggGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGtt                                      >  1:3143006/1‑93 (MQ=255)
                                                   aggaggGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGtt                                      <  2:121080/93‑1 (MQ=255)
                                                   aggaggGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGtt                                      <  1:2286724/93‑1 (MQ=255)
                                                    ggaggGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGATGttt                                     >  2:3138206/1‑93 (MQ=255)
                                                    ggaggGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGttt                                     >  1:7594499/1‑93 (MQ=255)
                                                            tCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCa                             <  2:6212760/93‑1 (MQ=255)
                                                            tCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCa                             <  1:5793644/93‑1 (MQ=255)
                                                             cccccGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAg                            <  2:7615825/93‑1 (MQ=255)
                                                              ccccGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAgt                           >  2:2529309/1‑93 (MQ=255)
                                                                ccGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAgtgt                         <  2:5795354/93‑1 (MQ=255)
                                                                ccGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAgtgt                         >  1:2374213/1‑93 (MQ=255)
                                                                  gACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTaa                       >  2:2896438/1‑93 (MQ=255)
                                                                   gcGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTaaa                      <  1:4555621/92‑1 (MQ=255)
                                                                   ccGTCAACACACCTCATTCGAGCACGTGGTGGAGGTTCCGGCTGGTGTTGATGCTTTAATTGCATGTCACCGACGTTTGTTCGCAATTGTata                      >  1:5297197/2‑91 (MQ=255)
                                                                   aCGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTaaa                      <  2:4359106/93‑1 (MQ=255)
                                                                    cGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTaaaa                     <  1:5062074/93‑1 (MQ=255)
                                                                      tCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCTCCAGTGTAAAAGt                   >  2:6391673/1‑93 (MQ=255)
                                                                      tCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGt                   >  2:4078253/1‑93 (MQ=255)
                                                                      tCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGt                   <  1:3669828/93‑1 (MQ=255)
                                                                      tCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGt                   >  1:814411/1‑93 (MQ=255)
                                                                         acacacCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGtata                >  1:2536600/1‑93 (MQ=255)
                                                                         acacacCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGtata                <  1:2108169/93‑1 (MQ=255)
                                                                         acacacCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGtata                >  2:6587018/1‑93 (MQ=255)
                                                                           acacCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACt              >  1:3923843/1‑93 (MQ=255)
                                                                           acacCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACt              <  2:5087895/93‑1 (MQ=255)
                                                                             acCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGCAAAACTATACttt            >  1:957219/1‑93 (MQ=255)
                                                                              ccTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACtttt           >  2:7078176/1‑93 (MQ=255)
                                                                               cTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACttttt          >  1:2236351/1‑93 (MQ=255)
                                                                                tCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTa         <  1:6760603/93‑1 (MQ=255)
                                                                                 cATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTaa        <  1:5874188/93‑1 (MQ=255)
                                                                                   ttCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAAcc      <  2:7556000/93‑1 (MQ=255)
                                                                                       aGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCaa  >  1:4609232/1‑93 (MQ=255)
                                                                                          |                                                                                         
GCTTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCACGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCAA  >  NC_000913/4275527‑4275706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 210 total aligned reads displayed.
GGCGCTTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCACGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCAATATT  >  NC_000913/4275524‑4275710
                                                                                             |                                                                                             
GGCGCTTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCG                                                                                               <  SRR4302543.5613298/94‑1 (MQ=60)
GGCGCTTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACAACTCATTCGAGCG                                                                                               >  SRR4302543.4713723/1‑94 (MQ=60)
GCCGCTTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTAGCCCGCTGGTACACAGGAGGATTTCCCCCGACGTCAACACCCCTCATTCGAGCG                                                                                               <  SRR4302543.4739664/94‑1 (MQ=60)
 GCGCTTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGC                                                                                              <  SRR4302543.5036857/94‑1 (MQ=60)
 GCGCTTTAGTTTGTTTTCCGGTCTTTGTCTTCCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGC                                                                                              <  SRR4302543.607046/94‑1 (MQ=60)
  CGCTTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCG                                                                                             >  SRR4302543.2572368/1‑94 (MQ=60)
    CTTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTG                                                                                           >  SRR4302543.3531157/1‑94 (MQ=60)
     TTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGG                                                                                          <  SRR4302543.6199457/94‑1 (MQ=60)
     TTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGG                                                                                          >  SRR4302543.588848/1‑94 (MQ=60)
      TTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGT                                                                                         >  SRR4302543.988264/1‑94 (MQ=60)
      TTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGT                                                                                         >  SRR4302543.4820958/1‑94 (MQ=60)
      TTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGG                                                                                         >  SRR4302543.2631555/1‑94 (MQ=60)
        AGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGG                                                                                       >  SRR4302543.4910538/1‑94 (MQ=60)
        AGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGG                                                                                       <  SRR4302543.7869034/94‑1 (MQ=60)
        AGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGG                                                                                       >  SRR4302543.3360905/1‑94 (MQ=60)
        AGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGG                                                                                       >  SRR4302543.2345437/1‑94 (MQ=60)
         GTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGA                                                                                      <  SRR4302543.2722064/94‑1 (MQ=60)
          TTTTTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAG                                                                                     <  SRR4302543.1904861/94‑1 (MQ=60)
          TTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAG                                                                                     <  SRR4302543.7326450/94‑1 (MQ=60)
          TTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAG                                                                                     <  SRR4302543.899255/94‑1 (MQ=60)
           TTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGG                                                                                    <  SRR4302543.4663816/94‑1 (MQ=60)
            TGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGT                                                                                   <  SRR4302543.1979253/94‑1 (MQ=60)
               TTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCC                                                                                <  SRR4302543.1579618/94‑1 (MQ=60)
                TTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTTCCCCGGAGGGTTTCCCCCGCCGTCAACCCCCCTCATTCGAGCGCGTGGTGGAGGTTCCG                                                                               <  SRR4302543.7059612/94‑1 (MQ=60)
                TTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCG                                                                               <  SRR4302543.2690179/94‑1 (MQ=60)
                 TCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGG                                                                              <  SRR4302543.2896012/94‑1 (MQ=60)
                 TCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGG                                                                              <  SRR4302543.4336024/94‑1 (MQ=60)
                  CCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGT                                                                             >  SRR4302543.2397235/1‑94 (MQ=60)
                  CCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGT                                                                             >  SRR4302543.5036876/1‑94 (MQ=60)
                  CCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGT                                                                             <  SRR4302543.836034/94‑1 (MQ=60)
                   CGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTTCGGTT                                                                            <  SRR4302543.6283965/94‑1 (MQ=60)
                   CGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTT                                                                            <  SRR4302543.4823416/94‑1 (MQ=60)
                    GGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTG                                                                           >  SRR4302543.4438016/1‑94 (MQ=60)
                     GTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGG                                                                          >  SRR4302543.1866504/1‑94 (MQ=60)
                     GTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGG                                                                          >  SRR4302543.3169459/1‑94 (MQ=60)
                     GTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGCGGGGGAGGGTCCGGTTGG                                                                          >  SRR4302543.3169675/1‑94 (MQ=60)
                      TCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGT                                                                         <  SRR4302543.1288058/94‑1 (MQ=60)
                      TCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGT                                                                         >  SRR4302543.1287978/1‑94 (MQ=60)
                      TCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGG                                                                         >  SRR4302543.1753204/1‑94 (MQ=60)
                       CTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTG                                                                        >  SRR4302543.3020956/1‑94 (MQ=60)
                       CTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTG                                                                        >  SRR4302543.3708007/1‑94 (MQ=60)
                       CTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTG                                                                        <  SRR4302543.3507370/94‑1 (MQ=60)
                       CTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTG                                                                        <  SRR4302543.953492/94‑1 (MQ=60)
                        TTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGT                                                                       >  SRR4302543.6909019/1‑94 (MQ=60)
                        TTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGT                                                                       >  SRR4302543.6244185/1‑94 (MQ=60)
                        TTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGT                                                                       >  SRR4302543.6248941/1‑94 (MQ=60)
                        TTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGT                                                                       >  SRR4302543.6484961/1‑94 (MQ=60)
                          TGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTG                                                                     <  SRR4302543.7347192/94‑1 (MQ=60)
                          TGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTG                                                                     >  SRR4302543.3809157/1‑94 (MQ=60)
                          TGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTG                                                                     >  SRR4302543.7954527/1‑94 (MQ=60)
                          TGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTG                                                                     <  SRR4302543.1055771/94‑1 (MQ=60)
                          TGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTG                                                                     <  SRR4302543.6498414/94‑1 (MQ=60)
                           GTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGA                                                                    >  SRR4302543.85527/1‑94 (MQ=60)
                            TCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGAT                                                                   <  SRR4302543.4632154/94‑1 (MQ=60)
                            TCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGAT                                                                   <  SRR4302543.4466333/94‑1 (MQ=60)
                            TCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGAT                                                                   <  SRR4302543.198285/94‑1 (MQ=60)
                            TCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGAT                                                                   <  SRR4302543.6604748/94‑1 (MQ=60)
                            TCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGAT                                                                   <  SRR4302543.913177/94‑1 (MQ=60)
                             CTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGGGGGTCCGGTTGGTGTTGATG                                                                  >  SRR4302543.3166357/1‑94 (MQ=60)
                             CTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATG                                                                  <  SRR4302543.947699/94‑1 (MQ=60)
                             CTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATG                                                                  <  SRR4302543.537371/94‑1 (MQ=60)
                              TTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGC                                                                 >  SRR4302543.5867829/1‑94 (MQ=60)
                               TTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCT                                                                >  SRR4302543.3836044/1‑94 (MQ=60)
                               TTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCT                                                                <  SRR4302543.5511980/94‑1 (MQ=60)
                               TTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCT                                                                >  SRR4302543.5708618/1‑94 (MQ=60)
                               TTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCT                                                                >  SRR4302543.4497205/1‑94 (MQ=60)
                               TTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCT                                                                <  SRR4302543.1920283/94‑1 (MQ=60)
                                TCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTT                                                               >  SRR4302543.655868/1‑94 (MQ=60)
                                 CTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTT                                                              <  SRR4302543.4778156/94‑1 (MQ=60)
                                 CTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTT                                                              >  SRR4302543.7577774/1‑94 (MQ=60)
                                 CTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTT                                                              >  SRR4302543.6845463/1‑94 (MQ=60)
                                  TCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTA                                                             >  SRR4302543.5148762/1‑94 (MQ=60)
                                  TCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTA                                                             <  SRR4302543.4604737/94‑1 (MQ=60)
                                  TCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTA                                                             >  SRR4302543.5148761/1‑94 (MQ=60)
                                  TCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTA                                                             >  SRR4302543.7226896/1‑94 (MQ=60)
                                   CTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGCTCCGGTTGGTGTTGATGCTTTTA                                                            >  SRR4302543.3021321/1‑94 (MQ=60)
                                    TCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAAT                                                           <  SRR4302543.2676794/94‑1 (MQ=60)
                                    TCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAAT                                                           >  SRR4302543.5710439/1‑94 (MQ=60)
                                    TCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAAT                                                           >  SRR4302543.6293124/1‑94 (MQ=60)
                                     CTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATT                                                          >  SRR4302543.7450077/1‑94 (MQ=60)
                                     CTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATT                                                          <  SRR4302543.835867/94‑1 (MQ=60)
                                      TATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTG                                                         <  SRR4302543.5575812/94‑1 (MQ=60)
                                      TATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTG                                                         <  SRR4302543.7817253/94‑1 (MQ=60)
                                      TATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTG                                                         >  SRR4302543.7847853/1‑94 (MQ=60)
                                      TATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTG                                                         >  SRR4302543.6101662/1‑94 (MQ=60)
                                       ATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGT                                                        >  SRR4302543.4314559/1‑94 (MQ=60)
                                       ATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGT                                                        <  SRR4302543.1366605/94‑1 (MQ=60)
                                       ATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGT                                                        <  SRR4302543.2425308/94‑1 (MQ=60)
                                       ATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGT                                                        <  SRR4302543.7218224/94‑1 (MQ=60)
                                         CCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGCGGTTCCGGTTGGTGTTGATGCTTTAATTGTAT                                                      >  SRR4302543.2281963/1‑94 (MQ=60)
                                         CCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTAT                                                      <  SRR4302543.4653225/94‑1 (MQ=60)
                                         CCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTAT                                                      <  SRR4302543.4653226/94‑1 (MQ=60)
                                         CCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTAT                                                      >  SRR4302543.1160525/1‑94 (MQ=60)
                                         CCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTAT                                                      <  SRR4302543.7358375/94‑1 (MQ=60)
                                         CCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTAT                                                      <  SRR4302543.2125766/94‑1 (MQ=60)
                                         CCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTAT                                                      >  SRR4302543.2876965/1‑94 (MQ=60)
                                         CCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTAT                                                      <  SRR4302543.1902886/94‑1 (MQ=60)
                                         CCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTAT                                                      <  SRR4302543.3749921/94‑1 (MQ=60)
                                          CCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATG                                                     <  SRR4302543.1695789/94‑1 (MQ=60)
                                          CCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATG                                                     <  SRR4302543.4221941/94‑1 (MQ=60)
                                           CGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGT                                                    <  SRR4302543.7936510/94‑1 (MQ=60)
                                           CGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGT                                                    >  SRR4302543.2516960/1‑94 (MQ=60)
                                             CTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCA                                                  >  SRR4302543.411144/1‑94 (MQ=60)
                                             CTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCA                                                  >  SRR4302543.411143/1‑94 (MQ=60)
                                             CTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCA                                                  <  SRR4302543.4090018/94‑1 (MQ=60)
                                              TGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCAC                                                 <  SRR4302543.2346799/94‑1 (MQ=60)
                                              TGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCAC                                                 >  SRR4302543.2422195/1‑94 (MQ=60)
                                                GTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCG                                               >  SRR4302543.6155538/1‑94 (MQ=60)
                                                 TACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGA                                              <  SRR4302543.1443178/94‑1 (MQ=60)
                                                 TACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGA                                              <  SRR4302543.4635026/94‑1 (MQ=60)
                                                 TACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGA                                              <  SRR4302543.2122907/94‑1 (MQ=60)
                                                 GACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGA                                              <  SRR4302543.2717196/94‑1 (MQ=60)
                                                  ACACAGGAGGGTTTCCCCCGACGTCAACTCTCCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGAC                                             <  SRR4302543.5970599/94‑1 (MQ=60)
                                                  ACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGAC                                             <  SRR4302543.6984313/94‑1 (MQ=60)
                                                   CACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACG                                            >  SRR4302543.69446/1‑94 (MQ=60)
                                                   CACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACG                                            <  SRR4302543.2190913/94‑1 (MQ=60)
                                                   CACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACG                                            >  SRR4302543.4145674/1‑94 (MQ=60)
                                                   CACAGGAGGGGTTCCCCCGACGTCAACACACCTCATTCGAGCGAGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTAACCGACG                                            >  SRR4302543.6242623/1‑94 (MQ=60)
                                                     CAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTT                                          <  SRR4302543.2240580/94‑1 (MQ=60)
                                                     CAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTT                                          >  SRR4302543.3171275/1‑94 (MQ=60)
                                                     CAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTT                                          >  SRR4302543.3171276/1‑94 (MQ=60)
                                                      AGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTT                                         >  SRR4302543.7666652/1‑94 (MQ=60)
                                                      AGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTT                                         <  SRR4302543.2685513/94‑1 (MQ=60)
                                                      AGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTT                                         >  SRR4302543.1817296/1‑94 (MQ=60)
                                                      AGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTT                                         >  SRR4302543.4994503/1‑94 (MQ=60)
                                                       GGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTC                                        <  SRR4302543.5860611/94‑1 (MQ=60)
                                                        GAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCT                                       <  SRR4302543.2285786/94‑1 (MQ=60)
                                                        GAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCT                                       >  SRR4302543.467776/1‑94 (MQ=60)
                                                        GAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCT                                       <  SRR4302543.1729795/94‑1 (MQ=60)
                                                         AGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTT                                      >  SRR4302543.2417936/1‑94 (MQ=60)
                                                         AGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCACGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTT                                      >  SRR4302543.2619762/1‑94 (MQ=60)
                                                          GGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTC                                     <  SRR4302543.148608/94‑1 (MQ=60)
                                                          GGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTC                                     <  SRR4302543.7368199/94‑1 (MQ=60)
                                                          GGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTC                                     <  SRR4302543.4659730/94‑1 (MQ=60)
                                                          GGGTTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTC                                     >  SRR4302543.3168413/1‑94 (MQ=60)
                                                           GGGTTCCCCCGACGTCAACACCCCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCG                                    <  SRR4302543.2212331/94‑1 (MQ=60)
                                                             TTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCC                                  >  SRR4302543.3384910/1‑94 (MQ=60)
                                                             TTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCC                                  >  SRR4302543.729983/1‑94 (MQ=60)
                                                             TTTCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCC                                  >  SRR4302543.1710823/1‑94 (MQ=60)
                                                               TCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAG                                <  SRR4302543.6061505/94‑1 (MQ=60)
                                                               TCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAG                                <  SRR4302543.1354313/94‑1 (MQ=60)
                                                               TCCCCCGACGTCAACACACCTCATTCGAGCGCGTGGAGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAG                                >  SRR4302543.7772789/1‑94 (MQ=60)
                                                                TCCCCGACGTCAACACTCCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGCCGTTTCTTCGCCAGT                               <  SRR4302543.7801238/94‑1 (MQ=60)
                                                                CCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGT                               <  SRR4302543.7611410/94‑1 (MQ=60)
                                                                CCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGT                               <  SRR4302543.1808460/94‑1 (MQ=60)
                                                                CCCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGGTCCGGTTGGTGTTAATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGT                               >  SRR4302543.2295183/1‑94 (MQ=60)
                                                                 CCCCGACGTCAACACGCCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCGTCGACGTTTCTTCGCCAGTG                              <  SRR4302543.3735385/94‑1 (MQ=60)
                                                                 CCCCGACGTCAACACCCCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTG                              <  SRR4302543.1842114/94‑1 (MQ=60)
                                                                 CCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGGTGCTTTAATTGTATGTCACCGACGTTTCCTCGCCAGTC                              >  SRR4302543.7202885/1‑94 (MQ=60)
                                                                 CCCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTG                              >  SRR4302543.7202884/1‑94 (MQ=60)
                                                                  CCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGT                             >  SRR4302543.5510348/1‑94 (MQ=60)
                                                                  CCCGACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGT                             >  SRR4302543.2395723/1‑94 (MQ=60)
                                                                    CGACGTCAACACACCTCATTCGAGCGCGTGGAGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAA                           >  SRR4302543.3943754/1‑94 (MQ=60)
                                                                     GCCGTCAACACACCTCATTCGAGCACGTGGTGGAGGTTCCGGCTGGTGTTGATGCTTTAATTGCATGTCACCGACGTTTGTTCGCaattgtata                          >  SRR4302543.5345017/1‑85 (MQ=60)
                                                                     GACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGGTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAA                          >  SRR4302543.7423597/1‑94 (MQ=60)
                                                                      GCGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAA                         <  SRR4302543.4597101/94‑1 (MQ=60)
                                                                      ACGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAA                         <  SRR4302543.4930408/94‑1 (MQ=60)
                                                                       CGTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAG                        <  SRR4302543.5108058/94‑1 (MQ=60)
                                                                        GTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGT                       >  SRR4302543.821582/1‑94 (MQ=60)
                                                                        GTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGT                       <  SRR4302543.1804549/94‑1 (MQ=60)
                                                                        GTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGT                       >  SRR4302543.4279236/1‑94 (MQ=60)
                                                                        GTCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGA                       >  SRR4302543.2333151/1‑94 (MQ=60)
                                                                         TCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTA                      <  SRR4302543.5603000/94‑1 (MQ=60)
                                                                         TCAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTA                      <  SRR4302543.3702048/94‑1 (MQ=60)
                                                                          CAACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTAT                     >  SRR4302543.6740748/1‑94 (MQ=60)
                                                                           AACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATA                    <  SRR4302543.2283589/94‑1 (MQ=60)
                                                                           AACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATA                    >  SRR4302543.2559709/1‑94 (MQ=60)
                                                                            ACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATAC                   <  SRR4302543.3269356/94‑1 (MQ=60)
                                                                            ACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATAC                   <  SRR4302543.4864654/94‑1 (MQ=60)
                                                                            ACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATAC                   >  SRR4302543.2900500/1‑94 (MQ=60)
                                                                            ACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATAC                   <  SRR4302543.2127038/94‑1 (MQ=60)
                                                                            ACACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACAGACGTTTCTTCGCCAGTGTAAAAGTATAC                   <  SRR4302543.3866213/94‑1 (MQ=60)
                                                                             CACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACT                  <  SRR4302543.134677/94‑1 (MQ=60)
                                                                             CACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACT                  >  SRR4302543.3958473/1‑94 (MQ=60)
                                                                              CCACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTT                 <  SRR4302543.4783861/94‑1 (MQ=60)
                                                                              ACACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTT                 >  SRR4302543.3514468/1‑94 (MQ=60)
                                                                               CACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGCAAAACTATACTTT                >  SRR4302543.965606/1‑94 (MQ=60)
                                                                                ACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTT               >  SRR4302543.2806966/1‑94 (MQ=60)
                                                                                ACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTT               <  SRR4302543.651565/94‑1 (MQ=60)
                                                                                ACCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTT               <  SRR4302543.195776/94‑1 (MQ=60)
                                                                                 CCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTT              <  SRR4302543.1991000/94‑1 (MQ=60)
                                                                                 CCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTT              <  SRR4302543.4017638/94‑1 (MQ=60)
                                                                                 CCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTT              <  SRR4302543.447021/94‑1 (MQ=60)
                                                                                 CCTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTT              >  SRR4302543.2256587/1‑94 (MQ=60)
                                                                                  CTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTA             <  SRR4302543.1235598/94‑1 (MQ=60)
                                                                                  CTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTA             >  SRR4302543.6337691/1‑94 (MQ=60)
                                                                                  CTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTA             <  SRR4302543.5123030/94‑1 (MQ=60)
                                                                                  CTCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGAAGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTA             >  SRR4302543.2427200/1‑94 (MQ=60)
                                                                                   TCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAA            >  SRR4302543.7321444/1‑94 (MQ=60)
                                                                                   TCATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAA            <  SRR4302543.6824453/94‑1 (MQ=60)
                                                                                    CATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAAC           <  SRR4302543.5927700/94‑1 (MQ=60)
                                                                                     ATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACC          >  SRR4302543.3564759/1‑94 (MQ=60)
                                                                                     ATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACC          >  SRR4302543.154562/1‑94 (MQ=60)
                                                                                     ATTCGAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACC          <  SRR4302543.328591/94‑1 (MQ=60)
                                                                                         GAGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCAA      >  SRR4302543.4651103/1‑94 (MQ=60)
                                                                                          AGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCAAT     <  SRR4302543.3987287/94‑1 (MQ=60)
                                                                                          AGCGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCAAT     <  SRR4302543.3987289/94‑1 (MQ=60)
                                                                                            CGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCAATAT   >  SRR4302543.1214899/1‑94 (MQ=60)
                                                                                            CGCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCAATAT   >  SRR4302543.4103523/1‑94 (MQ=60)
                                                                                             GCGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCAATATT  <  SRR4302543.2423949/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGCGCTTTAGTTTGTTTTCCGGTCTTTGTCTTTCTCTCTATCCCGCTGGTACACAGGAGGGTTTCCCCCGACGTCAACACACCTCATTCGAGCACGTGGTGGAGGTTCCGGTTGGTGTTGATGCTTTAATTGTATGTCACCGACGTTTCTTCGCCAGTGTAAAAGTATACTTTTTAACCGCAATATT  >  NC_000913/4275524‑4275710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑