Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,282,491 A→G V101A (GTA→GCA)  yjcH ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,282,4910AG99.5% 1253.6 / ‑5.7 397V101A (GTA→GCA) yjcHhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (194/200);  total (195/202)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 414 total aligned reads displayed.

CTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTACCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAATC  >  NC_000913/4282401‑4282580
                                                                                          |                                                                                         
 tctACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCt                                                                                        >  2:7828748/1‑93 (MQ=255)
   tACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCa                                                                                      <  2:3678869/93‑1 (MQ=255)
    aCGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCAt                                                                                     <  1:7079757/93‑1 (MQ=255)
    aCGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCAt                                                                                     <  2:3824025/93‑1 (MQ=255)
    aCGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCAt                                                                                     >  2:4161012/1‑93 (MQ=255)
     cGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATg                                                                                    <  1:3901251/93‑1 (MQ=255)
      ggCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTATTCATGATGCTTGTGCCTCATGc                                                                                   >  2:5634861/1‑93 (MQ=255)
       gCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCa                                                                                  >  1:3363511/1‑93 (MQ=255)
          ccGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGa                                                                               >  2:2181706/1‑93 (MQ=255)
           cGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGAc                                                                              <  1:2858084/93‑1 (MQ=255)
             cTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACtt                                                                            >  1:3744472/1‑93 (MQ=255)
              tAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTc                                                                           >  2:3387252/1‑93 (MQ=255)
               aaTAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCa                                                                          <  1:6755320/93‑1 (MQ=255)
                aTAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCat                                                                         >  1:7344824/1‑93 (MQ=255)
                aTAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCat                                                                         <  1:2489288/93‑1 (MQ=255)
                 tAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCatt                                                                        <  1:2768418/93‑1 (MQ=255)
                  aGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCatta                                                                       <  2:1008279/93‑1 (MQ=255)
                   gCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCattat                                                                      >  2:4050008/1‑93 (MQ=255)
                    cATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCattatt                                                                     <  1:210461/93‑1 (MQ=255)
                      tCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTaa                                                                   <  2:878791/93‑1 (MQ=255)
                      tCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTaa                                                                   <  2:6163197/93‑1 (MQ=255)
                      tCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTaa                                                                   >  2:6502039/1‑93 (MQ=255)
                         gcggcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGAc                                                                <  2:3062337/93‑1 (MQ=255)
                         gcggcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGAc                                                                >  1:1418347/1‑93 (MQ=255)
                         gcggcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTCTGCCTCATGCAGGACTTCATTATTAAGAc                                                                >  2:5249984/1‑93 (MQ=255)
                          cggcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACg                                                               >  1:4463847/1‑93 (MQ=255)
                          cggcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACg                                                               <  1:1485283/93‑1 (MQ=255)
                          cggcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACg                                                               <  1:5392314/93‑1 (MQ=255)
                          cggcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTCGTGCCTCATGCAGGACTTCATTATTAAGACg                                                               <  1:1691988/93‑1 (MQ=255)
                           ggcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACgg                                                              <  1:5183823/93‑1 (MQ=255)
                           ggcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACgg                                                              >  1:6376055/1‑93 (MQ=255)
                            gcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGt                                                             >  2:4345613/1‑93 (MQ=255)
                            gcgTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGt                                                             >  2:50166/1‑93 (MQ=255)
                              gTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCg                                                           <  2:1939433/93‑1 (MQ=255)
                              gTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCg                                                           >  2:6743070/1‑93 (MQ=255)
                              gTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCg                                                           <  1:1173486/93‑1 (MQ=255)
                               ttAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGa                                                          >  2:6298553/1‑93 (MQ=255)
                                  gCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGCCTTCATTATTAAGACGGTCGAAtt                                                       >  2:2790470/1‑93 (MQ=255)
                                  gCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAAtt                                                       >  1:6893620/1‑93 (MQ=255)
                                  gCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAAtt                                                       <  2:3199935/93‑1 (MQ=255)
                                   cggCGAAAGTGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTc                                                      <  1:36617/91‑1 (MQ=255)
                                   cTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTc                                                      <  2:475855/93‑1 (MQ=255)
                                   cTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTc                                                      <  2:1500370/93‑1 (MQ=255)
                                    tGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCg                                                     <  1:1935413/93‑1 (MQ=255)
                                    tGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTACCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCg                                                     >  2:7637325/1‑93 (MQ=255)
                                      cGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGcc                                                   >  2:1748596/1‑93 (MQ=255)
                                        aaaGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGt                                                 <  1:6835029/93‑1 (MQ=255)
                                        aaaGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGt                                                 >  1:2291195/1‑93 (MQ=255)
                                        aaaGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGt                                                 >  1:6533500/1‑93 (MQ=255)
                                           gggAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTcg                                              >  1:7527208/1‑93 (MQ=255)
                                            ggAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTcgc                                             >  2:1346976/1‑93 (MQ=255)
                                            ggAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTcgc                                             >  2:6444240/1‑93 (MQ=255)
                                                 gtgGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTcgcccgcc                                        <  2:6370864/93‑1 (MQ=255)
                                                    gcggcAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGa                                     <  2:4218006/93‑1 (MQ=255)
                                                      ggcAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATg                                   >  1:7914798/1‑93 (MQ=255)
                                                        cAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTa                                 <  1:4867481/93‑1 (MQ=255)
                                                         aaGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAg                                <  2:706034/93‑1 (MQ=255)
                                                          aGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGa                               <  2:6857831/93‑1 (MQ=255)
                                                          aGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGa                               <  1:7228702/93‑1 (MQ=255)
                                                           gcgcCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGAt                              >  1:267408/1‑93 (MQ=255)
                                                           gcgcCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGAt                              <  1:6281805/93‑1 (MQ=255)
                                                             gcCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATAc                            >  2:5514495/1‑93 (MQ=255)
                                                             gcCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATAc                            >  2:5420052/1‑93 (MQ=255)
                                                              ccGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATAcc                           >  1:4939097/1‑93 (MQ=255)
                                                                 tCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCggg                        >  2:1098023/1‑92 (MQ=255)
                                                                 tCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGt                        >  1:7122666/1‑93 (MQ=255)
                                                                  cAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTg                       <  2:3889120/93‑1 (MQ=255)
                                                                   aGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTga                      <  2:6097562/93‑1 (MQ=255)
                                                                   aGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTga                      >  1:2225193/1‑93 (MQ=255)
                                                                   aGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTga                      <  2:5846075/93‑1 (MQ=255)
                                                                   aGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTga                      <  1:5769254/93‑1 (MQ=255)
                                                                   aGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTga                      <  1:3133099/93‑1 (MQ=255)
                                                                    gAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTgag                     >  2:6679150/1‑93 (MQ=255)
                                                                    gAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTgag                     >  2:7439047/1‑93 (MQ=255)
                                                                     aaCTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTgaga                    >  1:1037469/1‑93 (MQ=255)
                                                                     aaCTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTgaga                    >  1:5946626/1‑93 (MQ=255)
                                                                     aaCTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTgaga                    >  1:767974/1‑93 (MQ=255)
                                                                      aCTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGaa                   <  2:1612689/93‑1 (MQ=255)
                                                                      aCTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGaa                   <  2:6643272/93‑1 (MQ=255)
                                                                      aCTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGaa                   >  2:3008151/1‑93 (MQ=255)
                                                                       ctctTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAAc                  <  1:7800284/93‑1 (MQ=255)
                                                                       ctctTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAAc                  <  2:3480001/93‑1 (MQ=255)
                                                                        tctTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACa                 >  1:4322171/1‑93 (MQ=255)
                                                                         ctTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACaa                >  1:3192849/1‑93 (MQ=255)
                                                                         ctTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACaa                <  1:2420924/93‑1 (MQ=255)
                                                                          ttttCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACaaa               >  1:4597744/1‑93 (MQ=255)
                                                                           tttCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAg              <  2:7735677/93‑1 (MQ=255)
                                                                           tttCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAg              <  2:4595063/93‑1 (MQ=255)
                                                                           tttCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAg              <  2:2654109/93‑1 (MQ=255)
                                                                             tCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGga            <  2:1687155/93‑1 (MQ=255)
                                                                               atgatgCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGgaga          >  1:959040/1‑93 (MQ=255)
                                                                               atgatgCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGgaga          >  1:3522378/1‑93 (MQ=255)
                                                                               atgatgCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGgaga          <  1:2939246/93‑1 (MQ=255)
                                                                                tgatgCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGAt         >  1:6121115/1‑93 (MQ=255)
                                                                                  atgCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATca       <  2:4525517/93‑1 (MQ=255)
                                                                                  atgCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATca       <  2:5495379/93‑1 (MQ=255)
                                                                                   tgCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATcac      >  2:2476759/1‑93 (MQ=255)
                                                                                   tgCTTGTACCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATcac      <  2:7221065/93‑1 (MQ=255)
                                                                                    gCTTGTGCCTAGTGCGGGCCTTCATTGTTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATcaca     <  1:564770/93‑1 (MQ=255)
                                                                                     cTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACaa    >  2:5156007/1‑93 (MQ=255)
                                                                                          |                                                                                         
CTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTACCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAATC  >  NC_000913/4282401‑4282580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 209 total aligned reads displayed.
GCGCTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTACCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAATCACTC  >  NC_000913/4282398‑4282584
                                                                                             |                                                                                             
GCGCTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTG                                                                                               <  SRR4302543.137401/94‑1 (MQ=60)
 CGCTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGC                                                                                              <  SRR4302543.1193837/94‑1 (MQ=60)
 CGCTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGC                                                                                              >  SRR4302543.5945401/1‑94 (MQ=60)
 CGCTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGC                                                                                              >  SRR4302543.9217/1‑94 (MQ=60)
  GCTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCC                                                                                             >  SRR4302543.7674454/1‑94 (MQ=60)
   CTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCT                                                                                            <  SRR4302543.389496/94‑1 (MQ=60)
   CTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCT                                                                                            >  SRR4302543.6860653/1‑94 (MQ=60)
    TCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTC                                                                                           >  SRR4302543.5328268/1‑94 (MQ=60)
    TCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTC                                                                                           <  SRR4302543.7832389/94‑1 (MQ=60)
     CTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCCGCAGAACTCTTTTCATGATACTTGTGCCTCA                                                                                          >  SRR4302543.7159602/1‑94 (MQ=60)
     CTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGAGTCGCGGCAAGCGCCGTCATAACTCTTTTCATGATGCTTGTGCCTCA                                                                                          >  SRR4302543.2766209/1‑94 (MQ=60)
      TACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCAT                                                                                         <  SRR4302543.4532182/94‑1 (MQ=60)
       ACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATG                                                                                        <  SRR4302543.7148510/94‑1 (MQ=60)
       ACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATG                                                                                        <  SRR4302543.6417132/94‑1 (MQ=60)
        CGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGC                                                                                       <  SRR4302543.6229699/94‑1 (MQ=60)
        CGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGC                                                                                       <  SRR4302543.39996/94‑1 (MQ=60)
        CGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGC                                                                                       >  SRR4302543.2420336/1‑94 (MQ=60)
         GGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCA                                                                                      >  SRR4302543.3393751/1‑94 (MQ=60)
         GGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCA                                                                                      <  SRR4302543.3256212/94‑1 (MQ=60)
          GCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCATAACTCTTTTCATGATGCTTGTGCCTCATGCAG                                                                                     <  SRR4302543.1257267/94‑1 (MQ=60)
          GCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAG                                                                                     <  SRR4302543.3426670/94‑1 (MQ=60)
          GCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAG                                                                                     <  SRR4302543.1627049/94‑1 (MQ=60)
          GCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAG                                                                                     >  SRR4302543.5747561/1‑94 (MQ=60)
          GCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAG                                                                                     <  SRR4302543.5846555/94‑1 (MQ=60)
          GCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAG                                                                                     <  SRR4302543.2021738/94‑1 (MQ=60)
          GCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAG                                                                                     >  SRR4302543.2055038/1‑94 (MQ=60)
            CGCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGA                                                                                   <  SRR4302543.7641440/94‑1 (MQ=60)
            CCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGC                                                                                   >  SRR4302543.627456/1‑94 (MQ=60)
            CCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGA                                                                                   >  SRR4302543.3504526/1‑94 (MQ=60)
            CCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGA                                                                                   >  SRR4302543.5656594/1‑94 (MQ=60)
            CCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGA                                                                                   >  SRR4302543.1657364/1‑94 (MQ=60)
              CGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACT                                                                                 >  SRR4302543.4928597/1‑94 (MQ=60)
              CGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACT                                                                                 <  SRR4302543.2137037/94‑1 (MQ=60)
              CGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACT                                                                                 <  SRR4302543.2884151/94‑1 (MQ=60)
              CGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACT                                                                                 >  SRR4302543.7418086/1‑94 (MQ=60)
               GCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGcatt                                                                                >  SRR4302543.5570367/1‑90 (MQ=60)
               GCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTT                                                                                <  SRR4302543.1672542/94‑1 (MQ=60)
               GCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTT                                                                                >  SRR4302543.3777409/1‑94 (MQ=60)
                CTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTC                                                                               >  SRR4302543.1952229/1‑94 (MQ=60)
                 TAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCA                                                                              <  SRR4302543.2986182/94‑1 (MQ=60)
                 TAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCA                                                                              <  SRR4302543.3125990/94‑1 (MQ=60)
                 TAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCA                                                                              >  SRR4302543.6597932/1‑94 (MQ=60)
                  AATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCAT                                                                             >  SRR4302543.6623959/1‑94 (MQ=60)
                  AATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCAT                                                                             <  SRR4302543.6819120/94‑1 (MQ=60)
                  AATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCAT                                                                             >  SRR4302543.7415484/1‑94 (MQ=60)
                  AATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCAT                                                                             <  SRR4302543.978295/94‑1 (MQ=60)
                  AATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCAT                                                                             >  SRR4302543.28871/1‑94 (MQ=60)
                  AATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCATCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCAT                                                                             >  SRR4302543.7935409/1‑94 (MQ=60)
                   ATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATT                                                                            >  SRR4302543.6916828/1‑94 (MQ=60)
                   ATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATT                                                                            <  SRR4302543.2511843/94‑1 (MQ=60)
                    TAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTA                                                                           <  SRR4302543.2793610/94‑1 (MQ=60)
                     AGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTAT                                                                          <  SRR4302543.5413421/94‑1 (MQ=60)
                      GCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATT                                                                         <  SRR4302543.3438559/94‑1 (MQ=60)
                       CATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTA                                                                        <  SRR4302543.212255/94‑1 (MQ=60)
                        ATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAA                                                                       >  SRR4302543.2442641/1‑94 (MQ=60)
                        ATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAA                                                                       <  SRR4302543.1129290/94‑1 (MQ=60)
                        ATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAA                                                                       >  SRR4302543.5205736/1‑94 (MQ=60)
                        ATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAA                                                                       <  SRR4302543.2210596/94‑1 (MQ=60)
                         TCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAG                                                                      <  SRR4302543.4513366/94‑1 (MQ=60)
                           CGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGAC                                                                    <  SRR4302543.449285/94‑1 (MQ=60)
                           CGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGAC                                                                    >  SRR4302543.3301867/1‑94 (MQ=60)
                           CGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGAC                                                                    >  SRR4302543.1431187/1‑94 (MQ=60)
                            GCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACG                                                                   >  SRR4302543.4504298/1‑94 (MQ=60)
                            GCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACG                                                                   <  SRR4302543.4933761/94‑1 (MQ=60)
                             CGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGG                                                                  <  SRR4302543.5441338/94‑1 (MQ=60)
                             CGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGG                                                                  >  SRR4302543.6436043/1‑94 (MQ=60)
                             CGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGG                                                                  <  SRR4302543.1498655/94‑1 (MQ=60)
                             CGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGG                                                                  >  SRR4302543.5245241/1‑94 (MQ=60)
                             CGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTCGTGCCTCATGCAGGACTTCATTATTAAGACGG                                                                  <  SRR4302543.1707172/94‑1 (MQ=60)
                              GGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGT                                                                 <  SRR4302543.380884/94‑1 (MQ=60)
                              GGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGT                                                                 <  SRR4302543.5230598/94‑1 (MQ=60)
                               GCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTC                                                                <  SRR4302543.2745402/94‑1 (MQ=60)
                                CGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCG                                                               >  SRR4302543.4782035/1‑94 (MQ=60)
                                CGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCG                                                               <  SRR4302543.5875816/94‑1 (MQ=60)
                                 GTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGA                                                              >  SRR4302543.2952614/1‑94 (MQ=60)
                                 GTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGA                                                              <  SRR4302543.1184123/94‑1 (MQ=60)
                                  TTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAA                                                             >  SRR4302543.6067677/1‑94 (MQ=60)
                                  TTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAA                                                             <  SRR4302543.2444234/94‑1 (MQ=60)
                                   TAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAAT                                                            <  SRR4302543.7814392/94‑1 (MQ=60)
                                    AGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATT                                                           >  SRR4302543.6958422/1‑94 (MQ=60)
                                    AGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATT                                                           >  SRR4302543.2474032/1‑94 (MQ=60)
                                     GCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTC                                                          >  SRR4302543.6846119/1‑94 (MQ=60)
                                      CGGCGAAAGTGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCG                                                         <  SRR4302543.36950/94‑1 (MQ=60)
                                       TGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGC                                                        <  SRR4302543.1952814/94‑1 (MQ=60)
                                         CGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCG                                                      >  SRR4302543.7290371/1‑94 (MQ=60)
                                          GAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGT                                                     >  SRR4302543.6595008/1‑94 (MQ=60)
                                          GAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGT                                                     >  SRR4302543.1712287/1‑94 (MQ=60)
                                          GAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGT                                                     >  SRR4302543.2312106/1‑94 (MQ=60)
                                           AAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTT                                                    <  SRR4302543.6899553/94‑1 (MQ=60)
                                            AAGGGAGTGTGGCGGCAAGCGCCGTCAGACCTCTTTCCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTC                                                   <  SRR4302543.7931514/94‑1 (MQ=60)
                                            AAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTC                                                   <  SRR4302543.4960692/94‑1 (MQ=60)
                                             AGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCG                                                  >  SRR4302543.7599016/1‑94 (MQ=60)
                                             AGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCG                                                  <  SRR4302543.5821455/94‑1 (MQ=60)
                                             AGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCG                                                  <  SRR4302543.2296810/94‑1 (MQ=60)
                                                       GCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGAT                                        <  SRR4302543.714427/94‑1 (MQ=60)
                                                       GCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGAT                                        >  SRR4302543.6922338/1‑94 (MQ=60)
                                                       GCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGAT                                        <  SRR4302543.2581662/94‑1 (MQ=60)
                                                       GCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGAT                                        >  SRR4302543.7318363/1‑94 (MQ=60)
                                                        CGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATG                                       <  SRR4302543.2605314/94‑1 (MQ=60)
                                                        CGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATG                                       <  SRR4302543.6715073/94‑1 (MQ=60)
                                                        CGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATG                                       >  SRR4302543.7989150/1‑94 (MQ=60)
                                                         GGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGT                                      <  SRR4302543.5693492/94‑1 (MQ=60)
                                                           CAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAG                                    <  SRR4302543.4911854/94‑1 (MQ=60)
                                                            AAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGA                                   >  SRR4302543.374279/1‑94 (MQ=60)
                                                            AAGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGA                                   <  SRR4302543.2826102/94‑1 (MQ=60)
                                                             AGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGAT                                  <  SRR4302543.2984752/94‑1 (MQ=60)
                                                             AGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGAT                                  <  SRR4302543.7298721/94‑1 (MQ=60)
                                                             AGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGAT                                  >  SRR4302543.269756/1‑94 (MQ=60)
                                                             AGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGAT                                  <  SRR4302543.2708517/94‑1 (MQ=60)
                                                             AGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGAT                                  >  SRR4302543.881735/1‑94 (MQ=60)
                                                             AGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGAT                                  >  SRR4302543.6356894/1‑94 (MQ=60)
                                                             AGCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGAT                                  <  SRR4302543.7502650/94‑1 (MQ=60)
                                                              GCGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATA                                 <  SRR4302543.6340997/94‑1 (MQ=60)
                                                              GCGCCGTCAGAACTCTTTTCAGGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATA                                 <  SRR4302543.1352290/94‑1 (MQ=60)
                                                               gccccgCAGAACCCTTTTCATGATGCTTGTTCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATAC                                <  SRR4302543.1347170/88‑1 (MQ=60)
                                                               CGCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATAC                                >  SRR4302543.5032452/1‑94 (MQ=60)
                                                                GCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACC                               >  SRR4302543.4984074/1‑94 (MQ=60)
                                                                GCCGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACC                               >  SRR4302543.6819422/1‑94 (MQ=60)
                                                                  CGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGG                             >  SRR4302543.7414519/1‑94 (MQ=60)
                                                                  CGTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGG                             >  SRR4302543.4247195/1‑94 (MQ=60)
                                                                   GTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGT                            >  SRR4302543.7191858/1‑94 (MQ=60)
                                                                   GTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGT                            >  SRR4302543.476392/1‑94 (MQ=60)
                                                                   GTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGT                            >  SRR4302543.2281806/1‑94 (MQ=60)
                                                                   GTCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGT                            >  SRR4302543.2425330/1‑94 (MQ=60)
                                                                    TCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTG                           >  SRR4302543.3806932/1‑94 (MQ=60)
                                                                    TCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTG                           <  SRR4302543.7198920/94‑1 (MQ=60)
                                                                    TCAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTG                           <  SRR4302543.2811337/94‑1 (MQ=60)
                                                                     CAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGACTTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGA                          >  SRR4302543.2245281/1‑94 (MQ=60)
                                                                     CAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGA                          >  SRR4302543.2245280/1‑94 (MQ=60)
                                                                     CAGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGA                          >  SRR4302543.8952/1‑94 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         >  SRR4302543.1152217/1‑94 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         >  SRR4302543.116566/1‑94 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         >  SRR4302543.1003611/1‑94 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         >  SRR4302543.635112/1‑94 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         <  SRR4302543.5403764/94‑1 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         >  SRR4302543.1356972/1‑94 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         <  SRR4302543.5821797/94‑1 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         <  SRR4302543.7020092/94‑1 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         >  SRR4302543.4618254/1‑94 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         <  SRR4302543.3161277/94‑1 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         <  SRR4302543.4369051/94‑1 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         <  SRR4302543.3639427/94‑1 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         <  SRR4302543.7293997/94‑1 (MQ=60)
                                                                      AGAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAG                         >  SRR4302543.3715289/1‑94 (MQ=60)
                                                                       GAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGA                        >  SRR4302543.6788919/1‑94 (MQ=60)
                                                                       GAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGA                        >  SRR4302543.774723/1‑94 (MQ=60)
                                                                       GAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGA                        >  SRR4302543.1046693/1‑94 (MQ=60)
                                                                       GAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGA                        <  SRR4302543.368835/94‑1 (MQ=60)
                                                                       GAACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGA                        >  SRR4302543.6001052/1‑94 (MQ=60)
                                                                        AACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAA                       <  SRR4302543.1480946/94‑1 (MQ=60)
                                                                         ACTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAAC                      >  SRR4302543.1479768/1‑94 (MQ=60)
                                                                          CTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACA                     >  SRR4302543.4361420/1‑94 (MQ=60)
                                                                          CTCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACA                     <  SRR4302543.7873803/94‑1 (MQ=60)
                                                                          CTCTTTTCATGATGCTTGTGCCTCATGCAGGAATTCATTATTAAGACGGTCGAATTAGCCGTTCGCACGCCAGATGTAGATACCGGTGAGAACA                     >  SRR4302543.4641626/1‑94 (MQ=60)
                                                                           TCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAA                    >  SRR4302543.5460080/1‑94 (MQ=60)
                                                                           TCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAA                    <  SRR4302543.6962455/94‑1 (MQ=60)
                                                                           TCTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAA                    >  SRR4302543.3221634/1‑94 (MQ=60)
                                                                            CTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGTTGAGAACAAA                   >  SRR4302543.2575872/1‑94 (MQ=60)
                                                                            CTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAA                   >  SRR4302543.4639498/1‑94 (MQ=60)
                                                                            CTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAA                   >  SRR4302543.7133191/1‑94 (MQ=60)
                                                                            CTTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAA                   <  SRR4302543.2442782/94‑1 (MQ=60)
                                                                             TTTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAG                  <  SRR4302543.1459748/94‑1 (MQ=60)
                                                                              TTTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGG                 >  SRR4302543.3224309/1‑94 (MQ=60)
                                                                               TTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGA                >  SRR4302543.6445113/1‑94 (MQ=60)
                                                                               TTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGA                <  SRR4302543.3952555/94‑1 (MQ=60)
                                                                               TTCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGA                >  SRR4302543.6445111/1‑94 (MQ=60)
                                                                                TCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAGGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATCCCGGTGAGAACAAAGGAG               <  SRR4302543.7377323/94‑1 (MQ=60)
                                                                                TCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAG               <  SRR4302543.4406396/94‑1 (MQ=60)
                                                                                TCATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAG               >  SRR4302543.7530451/1‑94 (MQ=60)
                                                                                 CATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGA              >  SRR4302543.7995904/1‑94 (MQ=60)
                                                                                 CATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGA              >  SRR4302543.967444/1‑94 (MQ=60)
                                                                                 CATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGA              <  SRR4302543.651401/94‑1 (MQ=60)
                                                                                 CATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGA              >  SRR4302543.983818/1‑94 (MQ=60)
                                                                                 CATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGA              >  SRR4302543.3553800/1‑94 (MQ=60)
                                                                                 CATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGA              >  SRR4302543.694555/1‑94 (MQ=60)
                                                                                  ATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGTT             <  SRR4302543.7880311/94‑1 (MQ=60)
                                                                                  ATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGAT             >  SRR4302543.6179088/1‑94 (MQ=60)
                                                                                  ATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGAT             >  SRR4302543.2152993/1‑94 (MQ=60)
                                                                                  ATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGAT             <  SRR4302543.2965939/94‑1 (MQ=60)
                                                                                  ATGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGAT             <  SRR4302543.2935175/94‑1 (MQ=60)
                                                                                   TGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATC            >  SRR4302543.5914190/1‑94 (MQ=60)
                                                                                   TGATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATC            <  SRR4302543.5814221/94‑1 (MQ=60)
                                                                                    GATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCA           <  SRR4302543.7782378/94‑1 (MQ=60)
                                                                                    GATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCA           <  SRR4302543.7177697/94‑1 (MQ=60)
                                                                                     ATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCCGATGTAGATACCGGTGAGAACAAAGGAGATCAC          >  SRR4302543.4297087/1‑94 (MQ=60)
                                                                                     ATGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCAC          >  SRR4302543.2288832/1‑94 (MQ=60)
                                                                                      TGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACA         >  SRR4302543.3137404/1‑94 (MQ=60)
                                                                                      TGCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACA         <  SRR4302543.3651306/94‑1 (MQ=60)
                                                                                       GCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCCGATGTAGATACCGGTGAGAACACAGGAGCTCACAA        >  SRR4302543.2086726/1‑94 (MQ=60)
                                                                                       GCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAA        >  SRR4302543.288067/1‑94 (MQ=60)
                                                                                       GCTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAA        >  SRR4302543.3728539/1‑94 (MQ=60)
                                                                                        CTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAAT       >  SRR4302543.7686658/1‑94 (MQ=60)
                                                                                        CTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAAT       <  SRR4302543.3196282/94‑1 (MQ=60)
                                                                                        CTTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAAT       <  SRR4302543.6226220/94‑1 (MQ=60)
                                                                                         TTGTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAATC      <  SRR4302543.6019666/94‑1 (MQ=60)
                                                                                           GTGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAATCAC    >  SRR4302543.3451316/1‑94 (MQ=60)
                                                                                            TGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAATCACT   <  SRR4302543.2098316/94‑1 (MQ=60)
                                                                                            TGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAATCACT   <  SRR4302543.5032996/94‑1 (MQ=60)
                                                                                            TGCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAATCACT   >  SRR4302543.1719101/1‑94 (MQ=60)
                                                                                             GCCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAATCACTC  <  SRR4302543.7281943/94‑1 (MQ=60)
                                                                                             |                                                                                             
GCGCTCTACGGCCCCGCTAATAGCATCCGCGGCGTTAGCTGCGAAAGGGAGTGTGGCGGCAAGCGCCGTCAGAACTCTTTTCATGATGCTTGTACCTCATGCAGGACTTCATTATTAAGACGGTCGAATTCGCCGTTCGCCCGCCAGATGTAGATACCGGTGAGAACAAAGGAGATCACAATCACTC  >  NC_000913/4282398‑4282584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑