Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,560,261 C→T intergenic (‑17/+51) yjiJ ← / ← yjiK putative transport protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,560,2610CT100.0% 1284.6 / NA 351intergenic (‑17/+51)yjiJ/yjiKputative transport protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (154/197);  total (154/197)

Only 100 of 364 total aligned reads displayed.

CTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATT  >  NC_000913/4560169‑4560350
                                                                                            |                                                                                         
  aaGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAt                                                                                         <  1:5013546/93‑1 (MQ=255)
  aaGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAt                                                                                         <  2:1897838/93‑1 (MQ=255)
   aGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAtt                                                                                        >  2:7482131/1‑93 (MQ=255)
    ggTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAttt                                                                                       >  1:4651194/1‑93 (MQ=255)
    ggTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAttt                                                                                       <  1:7847099/93‑1 (MQ=255)
    agTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAttt                                                                                       <  1:3901431/92‑1 (MQ=255)
     gTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAtttt                                                                                      <  1:4445973/93‑1 (MQ=255)
      tCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTTTTAttttt                                                                                     <  2:1680193/93‑1 (MQ=255)
      tCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAttttt                                                                                     <  2:6957913/93‑1 (MQ=255)
       cAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTttg                                                                                    <  1:124559/93‑1 (MQ=255)
       cAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTttg                                                                                    <  1:4074646/93‑1 (MQ=255)
        aGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTttgt                                                                                   <  2:2825473/93‑1 (MQ=255)
          aaCCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTttgttg                                                                                 <  2:3514912/93‑1 (MQ=255)
           aCCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTtgttgt                                                                                <  1:67943/93‑1 (MQ=255)
           aCCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTtgttgt                                                                                <  2:2254898/93‑1 (MQ=255)
            ccAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTgttgtt                                                                               <  1:5564352/93‑1 (MQ=255)
            ccAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTgttgtt                                                                               >  2:7209078/1‑93 (MQ=255)
             cAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTa                                                                              <  2:302984/93‑1 (MQ=255)
             cAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTa                                                                              <  2:5315337/93‑1 (MQ=255)
             cAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTa                                                                              >  1:7171819/1‑93 (MQ=255)
               gCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAAc                                                                            >  1:5440186/1‑93 (MQ=255)
               gCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAAc                                                                            >  1:4800361/1‑93 (MQ=255)
                cATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACa                                                                           <  1:6470131/93‑1 (MQ=255)
                  tCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAg                                                                         >  1:7609956/1‑93 (MQ=255)
                  tCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAg                                                                         >  2:6512350/1‑93 (MQ=255)
                  tCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAg                                                                         <  2:4722181/93‑1 (MQ=255)
                  tCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAg                                                                         >  1:4274157/1‑93 (MQ=255)
                      gAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaa                                                                     >  2:5207102/1‑93 (MQ=255)
                       aaaaGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaat                                                                    <  2:7644004/93‑1 (MQ=255)
                         aaGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaataa                                                                  >  1:5361038/1‑93 (MQ=255)
                            cgcgGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACTAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACaa                                                               <  1:196584/93‑1 (MQ=255)
                               ggTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACaaaaa                                                            <  1:3549890/93‑1 (MQ=255)
                                gTGCTTAAAGAAAAGCGTTGTGCGTGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAg                                                           <  1:4960467/93‑1 (MQ=255)
                                gTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAg                                                           >  2:4175791/1‑93 (MQ=255)
                                gTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAg                                                           >  1:6917907/1‑93 (MQ=255)
                                 tGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAgg                                                          >  2:2976667/1‑93 (MQ=255)
                                  gCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGt                                                         >  1:3744803/1‑93 (MQ=255)
                                    tGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGa                                                       <  2:7866384/93‑1 (MQ=255)
                                     gaaagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGaa                                                      >  1:631865/1‑93 (MQ=255)
                                     gaaagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGaa                                                      <  2:6112217/93‑1 (MQ=255)
                                      aaagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAg                                                     <  2:7124373/93‑1 (MQ=255)
                                       aagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGc                                                    <  1:2695877/93‑1 (MQ=255)
                                        agaaaGACGGTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   <  1:3026072/93‑1 (MQ=255)
                                        agaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAAGCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   >  2:584982/1‑93 (MQ=255)
                                        agaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   <  1:4294409/93‑1 (MQ=255)
                                        agaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   <  2:4442086/93‑1 (MQ=255)
                                        agaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   <  1:4527363/93‑1 (MQ=255)
                                         gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  <  2:5963928/93‑1 (MQ=255)
                                         gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  >  2:5426467/1‑93 (MQ=255)
                                         gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  >  2:4694041/1‑93 (MQ=255)
                                         gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  <  1:6616093/93‑1 (MQ=255)
                                         gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  <  1:247869/93‑1 (MQ=255)
                                           aaaGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGc                                                <  1:2594756/93‑1 (MQ=255)
                                                gTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGcc                                           <  2:2120030/93‑1 (MQ=255)
                                                 ttCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAAGAAAAAGGTGAAGCATGCCAGCCt                                          >  2:4299404/1‑93 (MQ=255)
                                                 ttCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCt                                          >  1:1836703/1‑93 (MQ=255)
                                                  tCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTg                                         <  2:5499207/93‑1 (MQ=255)
                                                    tACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGtt                                       >  1:1065272/1‑93 (MQ=255)
                                                     aCGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTa                                      <  1:1606936/93‑1 (MQ=255)
                                                      cGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTaa                                     >  1:3400044/1‑93 (MQ=255)
                                                      cGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTaa                                     >  2:3076260/1‑93 (MQ=255)
                                                      cGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTaa                                     <  2:1948450/93‑1 (MQ=255)
                                                       gggATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAAt                                    <  1:1002102/93‑1 (MQ=255)
                                                        ggATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATg                                   <  2:2392500/93‑1 (MQ=255)
                                                        ggATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATg                                   <  2:5756575/93‑1 (MQ=255)
                                                            gCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgat                               <  1:615939/93‑1 (MQ=255)
                                                             cGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgatg                              <  1:2847338/93‑1 (MQ=255)
                                                               tGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgatgat                            <  1:1736732/93‑1 (MQ=255)
                                                               tGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgatgat                            <  2:1494384/93‑1 (MQ=255)
                                                               tGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgatgat                            <  2:2602405/93‑1 (MQ=255)
                                                                ggACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGAtt                           <  1:2012946/93‑1 (MQ=255)
                                                                 gACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTg                          <  2:7572851/93‑1 (MQ=255)
                                                                  aCGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGa                         <  1:7691601/93‑1 (MQ=255)
                                                                   cGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAg                        >  2:3857931/1‑93 (MQ=255)
                                                                   cGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAg                        >  2:4531072/1‑93 (MQ=255)
                                                                    gAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgg                       <  1:3241351/93‑1 (MQ=255)
                                                                    gAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgg                       >  2:6743459/1‑93 (MQ=255)
                                                                     aaGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAggg                      <  1:7246709/93‑1 (MQ=255)
                                                                     aaGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAggg                      <  1:4737317/93‑1 (MQ=255)
                                                                      aGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgggg                     >  1:7504773/1‑93 (MQ=255)
                                                                       ggCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGt                    >  1:811748/1‑93 (MQ=255)
                                                                       ggCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGt                    <  1:135563/93‑1 (MQ=255)
                                                                           tGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAg                >  2:5616041/1‑93 (MQ=255)
                                                                            gTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGc               <  2:5093674/93‑1 (MQ=255)
                                                                             tttAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCg              <  1:3133073/93‑1 (MQ=255)
                                                                              ttAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGa             >  2:6658945/1‑93 (MQ=255)
                                                                              ttAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGa             >  2:6376152/1‑93 (MQ=255)
                                                                                 aCCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaa          <  1:1936475/93‑1 (MQ=255)
                                                                                  ccTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaa         >  1:6249039/1‑93 (MQ=255)
                                                                                   cTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaa        >  1:2340365/1‑93 (MQ=255)
                                                                                   cTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaa        <  1:2629833/93‑1 (MQ=255)
                                                                                    ttgtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATcaaaa       >  2:4015049/1‑93 (MQ=255)
                                                                                    ttgtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaaa       <  2:1236205/93‑1 (MQ=255)
                                                                                    ttgtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaaa       >  2:3360820/1‑93 (MQ=255)
                                                                                     tgtttgttATTTTTGTTGTTAACTAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGCGGGGTAAAGCGATAAAAAc      <  1:7002480/93‑1 (MQ=255)
                                                                                     tgtttgttATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAAc      <  1:3594765/93‑1 (MQ=255)
                                                                                     tgtttgttATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAAc      >  2:3658920/1‑93 (MQ=255)
                                                                                       tttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGa    >  1:512005/1‑93 (MQ=255)
                                                                                         tgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGAtt  <  2:1026155/93‑1 (MQ=255)
                                                                                         tgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGAtt  <  1:5955566/93‑1 (MQ=255)
                                                                                            |                                                                                         
CTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATT  >  NC_000913/4560169‑4560350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 215 total aligned reads displayed.
CCTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGT  >  NC_000913/4560168‑4560354
                                                                                             |                                                                                             
CCTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTT                                                                                               >  SRR4302543.397310/1‑94 (MQ=60)
CCTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTT                                                                                               <  SRR4302543.4044534/94‑1 (MQ=60)
 CTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTA                                                                                              >  SRR4302543.6444251/1‑94 (MQ=60)
 CTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTA                                                                                              >  SRR4302543.6444250/1‑94 (MQ=60)
 CTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTA                                                                                              >  SRR4302543.3388464/1‑94 (MQ=60)
 CTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTA                                                                                              >  SRR4302543.5690537/1‑94 (MQ=60)
  TAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAT                                                                                             <  SRR4302543.365743/94‑1 (MQ=60)
   AAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATT                                                                                            >  SRR4302543.1889701/1‑94 (MQ=60)
   AAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATT                                                                                            <  SRR4302543.5059170/94‑1 (MQ=60)
    AGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTT                                                                                           >  SRR4302543.4693528/1‑94 (MQ=60)
    AGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTT                                                                                           <  SRR4302543.6041393/94‑1 (MQ=60)
    AGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTT                                                                                           <  SRR4302543.6989380/94‑1 (MQ=60)
     GGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTT                                                                                          >  SRR4302543.6240961/1‑94 (MQ=60)
     GGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTT                                                                                          <  SRR4302543.7921055/94‑1 (MQ=60)
     AGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTT                                                                                          <  SRR4302543.3935884/94‑1 (MQ=60)
     AGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTT                                                                                          <  SRR4302543.3935885/94‑1 (MQ=60)
      GTCAGAACCAGCATCCCGAAAAGCGCTGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTT                                                                                         <  SRR4302543.3062406/94‑1 (MQ=60)
      GTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTT                                                                                         <  SRR4302543.4486242/94‑1 (MQ=60)
       TCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAACAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTG                                                                                        <  SRR4302543.2951694/94‑1 (MQ=60)
       TCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTG                                                                                        <  SRR4302543.906748/94‑1 (MQ=60)
       TCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTG                                                                                        <  SRR4302543.2951693/94‑1 (MQ=60)
        CAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGT                                                                                       >  SRR4302543.2681529/1‑94 (MQ=60)
        CAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGT                                                                                       <  SRR4302543.125685/94‑1 (MQ=60)
        CAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGT                                                                                       <  SRR4302543.4111158/94‑1 (MQ=60)
        CAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCCTGTTTGTTATTTTTGT                                                                                       >  SRR4302543.2171914/1‑94 (MQ=60)
         AGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTT                                                                                      <  SRR4302543.1852032/94‑1 (MQ=60)
         AGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTT                                                                                      >  SRR4302543.244629/1‑94 (MQ=60)
         AGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTT                                                                                      <  SRR4302543.2377817/94‑1 (MQ=60)
         AGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTT                                                                                      <  SRR4302543.711780/94‑1 (MQ=60)
           AACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGT                                                                                    <  SRR4302543.3970592/94‑1 (MQ=60)
           AACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGT                                                                                    >  SRR4302543.1182675/1‑94 (MQ=60)
            ACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTT                                                                                   >  SRR4302543.4642932/1‑94 (MQ=60)
            ACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTT                                                                                   <  SRR4302543.68549/94‑1 (MQ=60)
            ACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTT                                                                                   >  SRR4302543.4609807/1‑94 (MQ=60)
             CCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTA                                                                                  >  SRR4302543.7241451/1‑94 (MQ=60)
             CCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTA                                                                                  >  SRR4302543.2523497/1‑94 (MQ=60)
             CCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTA                                                                                  >  SRR4302543.3926657/1‑94 (MQ=60)
             CCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTA                                                                                  <  SRR4302543.5614963/94‑1 (MQ=60)
             CCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTA                                                                                  <  SRR4302543.5614964/94‑1 (MQ=60)
              CAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAA                                                                                 >  SRR4302543.3587586/1‑94 (MQ=60)
               cacattacgaaaaggtcggtgttgaaaagaaagctgttctacggaatcggGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAAC                                                                                <  SRR4302543.5565982/44‑1 (MQ=60)
               AGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAAC                                                                                <  SRR4302543.5565981/94‑1 (MQ=60)
               AGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAAC                                                                                >  SRR4302543.4844231/1‑94 (MQ=60)
                GCATCCCGAAAAGCGCGGTGCTGAAAGATAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACA                                                                               <  SRR4302543.7828218/94‑1 (MQ=60)
                GCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACA                                                                               <  SRR4302543.739883/94‑1 (MQ=60)
                 CATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAA                                                                              <  SRR4302543.6531085/94‑1 (MQ=60)
                  ATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAG                                                                             <  SRR4302543.2648117/94‑1 (MQ=60)
                  ATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAG                                                                             >  SRR4302543.4909698/1‑94 (MQ=60)
                  ATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAG                                                                             >  SRR4302543.4313004/1‑94 (MQ=60)
                  ATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAG                                                                             >  SRR4302543.4313002/1‑94 (MQ=60)
                  ATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAG                                                                             <  SRR4302543.7029135/94‑1 (MQ=60)
                  ATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAG                                                                             >  SRR4302543.6948889/1‑94 (MQ=60)
                  ATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAG                                                                             <  SRR4302543.1977400/94‑1 (MQ=60)
                  ATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAG                                                                             >  SRR4302543.7682208/1‑94 (MQ=60)
                   TCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGT                                                                            <  SRR4302543.1727018/94‑1 (MQ=60)
                   TCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGT                                                                            <  SRR4302543.3346702/94‑1 (MQ=60)
                    CCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTT                                                                           <  SRR4302543.6253343/94‑1 (MQ=60)
                       GAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAAT                                                                        <  SRR4302543.6799363/94‑1 (MQ=60)
                        AAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATA                                                                       >  SRR4302543.4723532/1‑94 (MQ=60)
                        AAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATA                                                                       <  SRR4302543.5357135/94‑1 (MQ=60)
                        AAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATA                                                                       >  SRR4302543.4784296/1‑94 (MQ=60)
                        AAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATA                                                                       >  SRR4302543.4723531/1‑94 (MQ=60)
                         AAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAA                                                                      >  SRR4302543.5409559/1‑94 (MQ=60)
                         AAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAA                                                                      <  SRR4302543.6549349/94‑1 (MQ=60)
                           AGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACA                                                                    <  SRR4302543.7309427/94‑1 (MQ=60)
                            GCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAA                                                                   >  SRR4302543.7466063/1‑94 (MQ=60)
                             CGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACTAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAA                                                                  <  SRR4302543.198245/94‑1 (MQ=60)
                               CGGTGCTGATAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAA                                                                >  SRR4302543.545856/1‑94 (MQ=60)
                               CGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAA                                                                >  SRR4302543.3492230/1‑94 (MQ=60)
                               CGGGGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAA                                                                >  SRR4302543.3492231/1‑94 (MQ=60)
                                GGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAATCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAG                                                               >  SRR4302543.4432091/1‑94 (MQ=60)
                                GGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAG                                                               >  SRR4302543.6982944/1‑94 (MQ=60)
                                GGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAG                                                               <  SRR4302543.3581387/94‑1 (MQ=60)
                                GGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAG                                                               >  SRR4302543.2514009/1‑94 (MQ=60)
                                GGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAG                                                               <  SRR4302543.5423909/94‑1 (MQ=60)
                                GGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAG                                                               >  SRR4302543.1737497/1‑94 (MQ=60)
                                GGCGCTGAAAGAAAAGCGTTCTACGGGCTGCGTGGACGACGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTCACAAGTTAATAACAAAAAG                                                               >  SRR4302543.6982943/1‑94 (MQ=60)
                                 GTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGG                                                              >  SRR4302543.3004854/1‑94 (MQ=60)
                                  TGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGT                                                             >  SRR4302543.3777743/1‑94 (MQ=60)
                                   GCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTG                                                            <  SRR4302543.3736586/94‑1 (MQ=60)
                                   GCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTG                                                            >  SRR4302543.1310570/1‑94 (MQ=60)
                                    CTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGA                                                           >  SRR4302543.7725536/1‑94 (MQ=60)
                                    CTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGA                                                           >  SRR4302543.4567425/1‑94 (MQ=60)
                                    CTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGA                                                           <  SRR4302543.5019893/94‑1 (MQ=60)
                                     TGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAA                                                          <  SRR4302543.3253051/94‑1 (MQ=60)
                                     TGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAA                                                          >  SRR4302543.7936363/1‑94 (MQ=60)
                                     TGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAA                                                          >  SRR4302543.509689/1‑94 (MQ=60)
                                     TGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAA                                                          <  SRR4302543.2023640/94‑1 (MQ=60)
                                     TGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAA                                                          >  SRR4302543.637639/1‑94 (MQ=60)
                                     TGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAA                                                          <  SRR4302543.6083957/94‑1 (MQ=60)
                                      GAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAG                                                         <  SRR4302543.5037811/94‑1 (MQ=60)
                                      GAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAG                                                         <  SRR4302543.1198074/94‑1 (MQ=60)
                                      GAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAG                                                         <  SRR4302543.3255023/94‑1 (MQ=60)
                                       AAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGC                                                        <  SRR4302543.5025375/94‑1 (MQ=60)
                                        AAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCA                                                       <  SRR4302543.2720320/94‑1 (MQ=60)
                                         agaaagacggTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAT                                                      <  SRR4302543.3053412/84‑1 (MQ=60)
                                         AGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAT                                                      <  SRR4302543.4568564/94‑1 (MQ=60)
                                         AGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAT                                                      >  SRR4302543.7654364/1‑94 (MQ=60)
                                         AGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAT                                                      <  SRR4302543.4333447/94‑1 (MQ=60)
                                         AGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAT                                                      >  SRR4302543.2069676/1‑94 (MQ=60)
                                          GAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATG                                                     <  SRR4302543.6678476/94‑1 (MQ=60)
                                          GAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATG                                                     <  SRR4302543.3094230/94‑1 (MQ=60)
                                          GAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATG                                                     <  SRR4302543.7597815/94‑1 (MQ=60)
                                          GAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATG                                                     <  SRR4302543.250027/94‑1 (MQ=60)
                                            AAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCC                                                   <  SRR4302543.2618333/94‑1 (MQ=60)
                                                 GTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCT                                              >  SRR4302543.1853231/1‑94 (MQ=60)
                                                 GTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCT                                              >  SRR4302543.1801417/1‑94 (MQ=60)
                                                    CTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTT                                           >  SRR4302543.2768651/1‑94 (MQ=60)
                                                    CTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTT                                           >  SRR4302543.6330858/1‑94 (MQ=60)
                                                    CTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTT                                           >  SRR4302543.1074844/1‑94 (MQ=60)
                                                    CTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTT                                           <  SRR4302543.6608457/94‑1 (MQ=60)
                                                    CTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTT                                           >  SRR4302543.4114458/1‑94 (MQ=60)
                                                    CTACGGGATGCGTGGACGAAGGCATGTTTAACCGTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTT                                           <  SRR4302543.7697516/94‑1 (MQ=60)
                                                     TACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTA                                          <  SRR4302543.2787634/94‑1 (MQ=60)
                                                      ACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAA                                         <  SRR4302543.1621266/94‑1 (MQ=60)
                                                      ACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAA                                         >  SRR4302543.3430506/1‑94 (MQ=60)
                                                       CGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAAT                                        <  SRR4302543.7450026/94‑1 (MQ=60)
                                                       CGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAAT                                        <  SRR4302543.6376377/94‑1 (MQ=60)
                                                       CGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAAT                                        <  SRR4302543.5861990/94‑1 (MQ=60)
                                                       CGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAAT                                        <  SRR4302543.2640303/94‑1 (MQ=60)
                                                       CGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAAT                                        >  SRR4302543.3613045/1‑94 (MQ=60)
                                                        GGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATG                                       <  SRR4302543.1010955/94‑1 (MQ=60)
                                                         GGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGC                                      >  SRR4302543.5424287/1‑94 (MQ=60)
                                                         GGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGC                                      >  SRR4302543.4321535/1‑94 (MQ=60)
                                                          GATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCG                                     <  SRR4302543.1017573/94‑1 (MQ=60)
                                                          GATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCG                                     <  SRR4302543.1979837/94‑1 (MQ=60)
                                                           ATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGA                                    >  SRR4302543.4533176/1‑94 (MQ=60)
                                                             GCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATG                                  <  SRR4302543.621574/94‑1 (MQ=60)
                                                             GCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATG                                  <  SRR4302543.6771932/94‑1 (MQ=60)
                                                             GCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATG                                  <  SRR4302543.2714715/94‑1 (MQ=60)
                                                              CGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGA                                 <  SRR4302543.2873335/94‑1 (MQ=60)
                                                               GTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGAT                                <  SRR4302543.4335933/94‑1 (MQ=60)
                                                                TGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATT                               <  SRR4302543.1752219/94‑1 (MQ=60)
                                                                TGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATT                               <  SRR4302543.1012416/94‑1 (MQ=60)
                                                                 GGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTG                              <  SRR4302543.2031039/94‑1 (MQ=60)
                                                                 GGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTG                              >  SRR4302543.5330449/1‑94 (MQ=60)
                                                                 GGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTG                              <  SRR4302543.2642127/94‑1 (MQ=60)
                                                                  GACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGA                             <  SRR4302543.4470594/94‑1 (MQ=60)
                                                                  GACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGA                             >  SRR4302543.1904400/1‑94 (MQ=60)
                                                                   ACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAG                            <  SRR4302543.2001786/94‑1 (MQ=60)
                                                                   ACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAG                            <  SRR4302543.5726959/94‑1 (MQ=60)
                                                                   ACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAG                            <  SRR4302543.7764419/94‑1 (MQ=60)
                                                                     GAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGG                          <  SRR4302543.3845079/94‑1 (MQ=60)
                                                                     GAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGG                          <  SRR4302543.3270670/94‑1 (MQ=60)
                                                                     GAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGG                          <  SRR4302543.4923697/94‑1 (MQ=60)
                                                                      AAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGG                         <  SRR4302543.7194096/94‑1 (MQ=60)
                                                                      AAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGG                         <  SRR4302543.4780609/94‑1 (MQ=60)
                                                                      AAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGG                         <  SRR4302543.7316814/94‑1 (MQ=60)
                                                                      AAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGG                         >  SRR4302543.1877220/1‑94 (MQ=60)
                                                                      AAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGG                         >  SRR4302543.7576512/1‑94 (MQ=60)
                                                                      AAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGG                         <  SRR4302543.1976753/94‑1 (MQ=60)
                                                                      AAGGAATGTTTAACCTTGATTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCTTGTTAATGCGATGATTGAGGGG                         <  SRR4302543.4780611/94‑1 (MQ=60)
                                                                       AGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGT                        >  SRR4302543.818896/1‑94 (MQ=60)
                                                                        GGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTA                       <  SRR4302543.136762/94‑1 (MQ=60)
                                                                        GGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTA                       >  SRR4302543.635328/1‑94 (MQ=60)
                                                                         GCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAA                      <  SRR4302543.3234186/94‑1 (MQ=60)
                                                                         GCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAA                      >  SRR4302543.5601586/1‑94 (MQ=60)
                                                                         GCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGCTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAA                      <  SRR4302543.7312809/94‑1 (MQ=60)
                                                                           ATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATCACAAAAAGGTGAAGAATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAG                    >  SRR4302543.6438931/1‑94 (MQ=60)
                                                                           ATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAG                    >  SRR4302543.4151209/1‑94 (MQ=60)
                                                                           ATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAG                    >  SRR4302543.3941499/1‑94 (MQ=60)
                                                                           ATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAG                    <  SRR4302543.1256978/94‑1 (MQ=60)
                                                                           ATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAG                    >  SRR4302543.528184/1‑94 (MQ=60)
                                                                           ATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAG                    >  SRR4302543.509276/1‑94 (MQ=60)
                                                                           ATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAG                    >  SRR4302543.7778950/1‑94 (MQ=60)
                                                                           ATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAG                    >  SRR4302543.1699274/1‑94 (MQ=60)
                                                                           ATGTTTAACCTTGTTTGTTATTTTTGTTGGTAACAAGTTAATAACAACAAGGTGAAGCATGCCAGCCTGTTCATGCGATGATTGAGGGGcacag                    >  SRR4302543.4151208/1‑89 (MQ=60)
                                                                             GTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCG                  <  SRR4302543.4751906/94‑1 (MQ=60)
                                                                             GTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCG                  >  SRR4302543.1591958/1‑94 (MQ=60)
                                                                              TTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGA                 <  SRR4302543.3161251/94‑1 (MQ=60)
                                                                               TTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGAT                <  SRR4302543.7055387/94‑1 (MQ=60)
                                                                                 AACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAA              >  SRR4302543.3384020/1‑94 (MQ=60)
                                                                                 AACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAA              >  SRR4302543.7891444/1‑94 (MQ=60)
                                                                                  ACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAA             >  SRR4302543.6307986/1‑94 (MQ=60)
                                                                                   CCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAA            >  SRR4302543.2361594/1‑94 (MQ=60)
                                                                                    CTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAA           <  SRR4302543.2653632/94‑1 (MQ=60)
                                                                                     TTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAAC          >  SRR4302543.647837/1‑94 (MQ=60)
                                                                                      TGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACG         <  SRR4302543.3626494/94‑1 (MQ=60)
                                                                                      TGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACG         >  SRR4302543.7965917/1‑94 (MQ=60)
                                                                                      TGTTTGTTATTTTTGTAGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACG         <  SRR4302543.7068921/94‑1 (MQ=60)
                                                                                      TGTTTGTTATTGTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACG         <  SRR4302543.676821/94‑1 (MQ=60)
                                                                                       GTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGA        >  SRR4302543.2194472/1‑94 (MQ=60)
                                                                                       GTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGA        >  SRR4302543.516768/1‑94 (MQ=60)
                                                                                        TTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGAT       >  SRR4302543.1427768/1‑94 (MQ=60)
                                                                                        TTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGAT       >  SRR4302543.3651581/1‑94 (MQ=60)
                                                                                        TTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGAT       <  SRR4302543.1197253/94‑1 (MQ=60)
                                                                                         TTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATT      >  SRR4302543.4914477/1‑94 (MQ=60)
                                                                                          TGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTT     <  SRR4302543.3587139/94‑1 (MQ=60)
                                                                                          TGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTT     >  SRR4302543.4312347/1‑94 (MQ=60)
                                                                                          TGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTT     >  SRR4302543.2015305/1‑94 (MQ=60)
                                                                                          TGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTT     <  SRR4302543.6010076/94‑1 (MQ=60)
                                                                                           GTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTG    <  SRR4302543.1187167/94‑1 (MQ=60)
                                                                                           GTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTG    <  SRR4302543.1926847/94‑1 (MQ=60)
                                                                                           GTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTG    >  SRR4302543.7046893/1‑94 (MQ=60)
                                                                                            TTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGG   >  SRR4302543.2623613/1‑94 (MQ=60)
                                                                                            TTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGG   <  SRR4302543.630918/94‑1 (MQ=60)
                                                                                            TTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGG   >  SRR4302543.6843282/1‑94 (MQ=60)
                                                                                             TATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGT  >  SRR4302543.4504618/1‑94 (MQ=60)
                                                                                             TATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGT  >  SRR4302543.72994/1‑94 (MQ=60)
                                                                                             TATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGT  <  SRR4302543.1701025/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGT  >  NC_000913/4560168‑4560354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: