Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,016,180 A→G I448T (ATA→ACA)  b0955 ← putative ATP‑dependent protease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,016,1800AG99.7% 1060.7 / NA 305I448T (ATA→ACA) b0955putative ATP‑dependent protease
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (147/157);  minor base T (0/1);  total (147/158)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 318 total aligned reads displayed.

AAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTATCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATC  >  NC_000913/1016090‑1016269
                                                                                          |                                                                                         
 aacaacCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCa                                                                                        <  1:4809798/93‑1 (MQ=255)
  accaccGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAg                                                                                       <  1:6412402/93‑1 (MQ=255)
   ccaccGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAgg                                                                                      <  2:3772606/93‑1 (MQ=255)
    caccGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAggg                                                                                     >  2:4791699/1‑93 (MQ=255)
    caccGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAggg                                                                                     >  2:2634274/1‑93 (MQ=255)
    caccGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAggg                                                                                     <  1:3864941/93‑1 (MQ=255)
     cccgaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGgc                                                                                    <  1:5197462/92‑1 (MQ=255)
     accgaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGgc                                                                                    >  1:7107999/1‑93 (MQ=255)
     accgaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGgc                                                                                    >  2:741558/1‑93 (MQ=255)
      ccgaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGgcg                                                                                   >  1:830475/1‑93 (MQ=255)
       cgaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGgcgc                                                                                  <  1:2177793/93‑1 (MQ=255)
        gaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCa                                                                                 >  1:4741548/1‑93 (MQ=255)
        gaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCa                                                                                 >  1:1766848/1‑93 (MQ=255)
        gaccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCa                                                                                 >  1:5841033/1‑93 (MQ=255)
          ccgGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCaga                                                                               >  1:2584569/1‑93 (MQ=255)
            ggCTTGGCGCGACCGAACTGAGCGACTGAACCTGTGATAGCGATTCTCTGATTCACCGGCCCATCGGCGAGGGCGCTTGTCAGGGCGCAGAGt                                                                             <  2:7554928/93‑1 (MQ=255)
             gCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGtt                                                                            <  2:5215418/93‑1 (MQ=255)
              cTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCTCTTGTCAGGGCGCAGAGTTc                                                                           <  2:4230184/93‑1 (MQ=255)
               tGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCa                                                                          <  2:8023938/93‑1 (MQ=255)
                gggCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAg                                                                         >  1:95322/1‑93 (MQ=255)
                  gcgcGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGcc                                                                       >  1:5479478/1‑93 (MQ=255)
                    gcgACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCAt                                                                     >  2:7640237/1‑93 (MQ=255)
                      gACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCg                                                                   >  1:7768677/1‑93 (MQ=255)
                       gccGAACTGATCGGCTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGa                                                                  <  1:6159139/92‑1 (MQ=255)
                        ccGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAg                                                                 <  1:5718363/93‑1 (MQ=255)
                        ccGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAg                                                                 <  1:5352865/93‑1 (MQ=255)
                        ccGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAg                                                                 <  1:4342122/93‑1 (MQ=255)
                           aaCTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCa                                                              >  1:2259238/1‑93 (MQ=255)
                             cTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACt                                                            <  1:5058209/93‑1 (MQ=255)
                              tGATCGACTGAACCTGTGATAGCGATACTCTGGTTCTCCGGCACATCCGCGAAGGCGGTTGGCAGGGCGCAGCGTTCAGCGATCGGGGCACtt                                                           >  2:3483299/1‑92 (MQ=255)
                              tGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCCCTa                                                           >  2:4102268/1‑93 (MQ=255)
                              tGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTa                                                           >  2:3699963/1‑93 (MQ=255)
                              tGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTa                                                           <  1:2055098/93‑1 (MQ=255)
                               gATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTAt                                                          >  2:6946214/1‑93 (MQ=255)
                               gATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTAt                                                          <  1:6964609/93‑1 (MQ=255)
                                aTCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTAtc                                                         <  1:1415102/93‑1 (MQ=255)
                                     cTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCAt                                                    >  2:2339236/1‑93 (MQ=255)
                                     cTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCAt                                                    >  2:5395455/1‑93 (MQ=255)
                                     cTGAACCTGAGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGTTGAAGAGTTCAGCCATCGAGCCAATATCTcctt                                                    >  2:7162979/1‑91 (MQ=255)
                                      tGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATc                                                   >  1:4011835/1‑93 (MQ=255)
                                      tGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATc                                                   <  2:5626944/93‑1 (MQ=255)
                                       gAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCa                                                  >  1:7583856/1‑93 (MQ=255)
                                        aaCCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCaa                                                 >  1:3425840/1‑93 (MQ=255)
                                         aCCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAAc                                                >  1:352689/1‑93 (MQ=255)
                                         aCCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAAc                                                <  2:7647385/93‑1 (MQ=255)
                                          ccTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACt                                               <  1:7896375/93‑1 (MQ=255)
                                           cTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTAAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACtt                                              <  1:1676697/93‑1 (MQ=255)
                                             gtgATAGCGATACTCTGATTCGCCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCCCTATCTCCATCAACTTcc                                            <  2:5903747/93‑2 (MQ=255)
                                              tgATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCAc                                           >  1:5110058/1‑93 (MQ=255)
                                               gATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACt                                          <  1:1005850/93‑1 (MQ=255)
                                                aTAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTg                                         <  1:6287692/93‑1 (MQ=255)
                                                 tAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGt                                        >  1:3400873/1‑93 (MQ=255)
                                                 tAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGt                                        >  1:4176524/1‑93 (MQ=255)
                                                  aGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTa                                       <  1:8481568/93‑1 (MQ=255)
                                                  aGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTa                                       <  2:702641/93‑1 (MQ=255)
                                                   gCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTAt                                      >  1:3596725/1‑93 (MQ=255)
                                                     gATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGa                                    <  2:3944202/93‑1 (MQ=255)
                                                     gATACTCTGATTCACCGGCAAATCGGCGAGGGCCCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGa                                    <  2:300634/93‑1 (MQ=255)
                                                       tACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACt                                  >  1:8740341/1‑93 (MQ=255)
                                                       tACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACt                                  >  2:6130513/1‑93 (MQ=255)
                                                       tACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACt                                  >  2:1678995/1‑93 (MQ=255)
                                                       tACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACt                                  <  1:279399/93‑1 (MQ=255)
                                                         ctctGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGc                                <  1:3182716/93‑1 (MQ=255)
                                                          tctGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCt                               >  1:2410870/1‑93 (MQ=255)
                                                          tctGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCt                               >  2:6403879/1‑93 (MQ=255)
                                                           ctGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTc                              <  1:2659574/93‑1 (MQ=255)
                                                            tGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCa                             >  2:7753319/1‑93 (MQ=255)
                                                            tGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCa                             >  2:6685255/1‑93 (MQ=255)
                                                                tCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATg                         <  1:1481674/93‑1 (MQ=255)
                                                                 cACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGt                        >  1:8068682/1‑93 (MQ=255)
                                                                  aCCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGTACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTc                       <  1:560597/93‑1 (MQ=255)
                                                                  aCCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTc                       >  2:8182931/1‑93 (MQ=255)
                                                                   ccGGCCCATCGGCGAGGGCACTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCa                      <  1:1082214/93‑1 (MQ=255)
                                                                   ccGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCa                      <  1:4648686/93‑1 (MQ=255)
                                                                    cGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAg                     <  1:3570329/93‑1 (MQ=255)
                                                                    cGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAg                     >  1:3813284/1‑93 (MQ=255)
                                                                     ggCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGc                    >  1:236409/1‑93 (MQ=255)
                                                                     ggCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGc                    <  2:1229023/93‑1 (MQ=255)
                                                                      gCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCg                   >  2:1443116/1‑93 (MQ=255)
                                                                       cacaTCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGa                  <  2:4880700/93‑1 (MQ=255)
                                                                       cacaTCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGa                  <  1:4455592/93‑1 (MQ=255)
                                                                        acaTCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGAt                 <  2:1374919/93‑1 (MQ=255)
                                                                        acaTCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGAt                 <  2:6969487/93‑1 (MQ=255)
                                                                            cGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTg             <  2:8170493/93‑1 (MQ=255)
                                                                             ggCGAGGGCGCTTGTCGGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAACGTCAGCGATGCTga            <  2:6228713/93‑1 (MQ=255)
                                                                             ggCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTga            <  1:4896444/93‑1 (MQ=255)
                                                                               cGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTgaga          >  1:6618773/1‑93 (MQ=255)
                                                                                 aGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCCCTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAg        <  1:2524319/93‑1 (MQ=255)
                                                                                 aGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAg        <  2:2691890/93‑1 (MQ=255)
                                                                                 aGGGCGCGTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAg        <  1:5973712/93‑1 (MQ=255)
                                                                                  gggCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAgg       <  2:4616522/93‑1 (MQ=255)
                                                                                   ggCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAggg      <  1:1633606/93‑1 (MQ=255)
                                                                                   ggCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAggg      <  2:8610621/93‑1 (MQ=255)
                                                                                    gcgcTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAgggg     <  2:2433032/93‑1 (MQ=255)
                                                                                     ggcTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGa    <  1:2721219/92‑1 (MQ=255)
                                                                                     ctcTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGa    <  2:3640684/91‑1 (MQ=255)
                                                                                     cgcTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGa    <  1:3699209/93‑1 (MQ=255)
                                                                                      gcTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGAt   <  2:829670/93‑1 (MQ=255)
                                                                                       cTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATc  >  2:1023013/1‑93 (MQ=255)
                                                                                       cTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATc  >  2:5777159/1‑93 (MQ=255)
                                                                                          |                                                                                         
AAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTATCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATC  >  NC_000913/1016090‑1016269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTTAAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTATCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATCTGTT  >  NC_000913/1016087‑1016273
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TTTAAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTG                                                                                               >  SRR4302541.425738/1‑94 (MQ=60)
TTTAAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTG                                                                                               <  SRR4302541.2355078/94‑1 (MQ=60)
  TAAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTC                                                                                             <  SRR4302541.6426017/94‑1 (MQ=60)
  TAAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTC                                                                                             >  SRR4302541.3737984/1‑94 (MQ=60)
  TAAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTC                                                                                             <  SRR4302541.8631416/94‑1 (MQ=60)
    AACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAG                                                                                           >  SRR4302541.5491406/1‑94 (MQ=60)
    AACAACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAG                                                                                           <  SRR4302541.4858848/94‑1 (MQ=60)
     ACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGG                                                                                          <  SRR4302541.6477799/94‑1 (MQ=60)
      CCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGG                                                                                         >  SRR4302541.488045/1‑94 (MQ=60)
      CCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGG                                                                                         >  SRR4302541.3454472/1‑94 (MQ=60)
      CCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGG                                                                                         >  SRR4302541.2593835/1‑94 (MQ=60)
       CACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCGCCGGCACATCGGCGAGGGCGCTTGTCAGGGC                                                                                        <  SRR4302541.3009227/94‑1 (MQ=60)
       CACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGC                                                                                        <  SRR4302541.3903819/94‑1 (MQ=60)
       CACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGC                                                                                        <  SRR4302541.8903782/94‑1 (MQ=60)
       CACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGC                                                                                        >  SRR4302541.7183691/1‑94 (MQ=60)
        CCCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCG                                                                                       <  SRR4302541.5250968/94‑1 (MQ=60)
        ACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCG                                                                                       >  SRR4302541.838021/1‑94 (MQ=60)
          CGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGGCCTTGTCAGGGCGCG                                                                                     >  SRR4302541.2422083/1‑94 (MQ=60)
          CGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCA                                                                                     >  SRR4302541.5647550/1‑94 (MQ=60)
          CGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCA                                                                                     >  SRR4302541.4789959/1‑94 (MQ=60)
          CGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCA                                                                                     >  SRR4302541.1784032/1‑94 (MQ=60)
          CGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCA                                                                                     >  SRR4302541.5900435/1‑94 (MQ=60)
          CGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCA                                                                                     >  SRR4302541.5947048/1‑94 (MQ=60)
          CGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCA                                                                                     <  SRR4302541.2198836/94‑1 (MQ=60)
           GACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAG                                                                                    >  SRR4302541.2428346/1‑94 (MQ=60)
            ACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGA                                                                                   >  SRR4302541.2610467/1‑94 (MQ=60)
              CGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGT                                                                                 >  SRR4302541.6397094/1‑94 (MQ=60)
               GGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTT                                                                                <  SRR4302541.5552902/94‑1 (MQ=60)
               GGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTT                                                                                >  SRR4302541.5148616/1‑94 (MQ=60)
               GGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTT                                                                                >  SRR4302541.7655200/1‑94 (MQ=60)
               GGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTT                                                                                >  SRR4302541.8815753/1‑94 (MQ=60)
                 CTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCA                                                                              >  SRR4302541.42514/1‑94 (MQ=60)
                  TGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAG                                                                             >  SRR4302541.6722481/1‑94 (MQ=60)
                  TGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAG                                                                             >  SRR4302541.3732365/1‑94 (MQ=60)
                  TGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAG                                                                             >  SRR4302541.96146/1‑94 (MQ=60)
                  TGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAG                                                                             <  SRR4302541.716720/94‑1 (MQ=60)
                   GGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGC                                                                            <  SRR4302541.996977/94‑1 (MQ=60)
                    GGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCC                                                                           >  SRR4302541.5535659/1‑94 (MQ=60)
                     GCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCA                                                                          <  SRR4302541.8902362/94‑1 (MQ=60)
                      CGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCAT                                                                         <  SRR4302541.2265005/94‑1 (MQ=60)
                      CGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCAT                                                                         >  SRR4302541.5676460/1‑94 (MQ=60)
                       GCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATC                                                                        >  SRR4302541.7169807/1‑94 (MQ=60)
                        CGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCG                                                                       <  SRR4302541.3453659/94‑1 (MQ=60)
                        CGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCG                                                                       >  SRR4302541.7603624/1‑94 (MQ=60)
                        CGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCG                                                                       >  SRR4302541.3615648/1‑94 (MQ=60)
                        CGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCG                                                                       <  SRR4302541.5116009/94‑1 (MQ=60)
                        CGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCG                                                                       >  SRR4302541.7851316/1‑94 (MQ=60)
                        CGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCG                                                                       <  SRR4302541.5881042/94‑1 (MQ=60)
                         GACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGA                                                                      >  SRR4302541.1802188/1‑94 (MQ=60)
                         GACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGA                                                                      >  SRR4302541.4877347/1‑94 (MQ=60)
                          GCCGAACTGATCGGCTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAG                                                                     <  SRR4302541.6222084/94‑1 (MQ=60)
                          GCCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAG                                                                     <  SRR4302541.6222323/94‑1 (MQ=60)
                           CCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGG                                                                    <  SRR4302541.3656796/94‑1 (MQ=60)
                           CCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGG                                                                    <  SRR4302541.4385474/94‑1 (MQ=60)
                           CCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGG                                                                    <  SRR4302541.1054380/94‑1 (MQ=60)
                           CCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGG                                                                    <  SRR4302541.5776664/94‑1 (MQ=60)
                           CCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGG                                                                    >  SRR4302541.5187469/1‑94 (MQ=60)
                           CCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGG                                                                    >  SRR4302541.5396414/1‑94 (MQ=60)
                           CCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGG                                                                    <  SRR4302541.5407865/94‑1 (MQ=60)
                           CCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGG                                                                    <  SRR4302541.2191380/94‑1 (MQ=60)
                           CCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGG                                                                    <  SRR4302541.5681665/94‑1 (MQ=60)
                            CGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGC                                                                   >  SRR4302541.3552232/1‑94 (MQ=60)
                            CGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGC                                                                   <  SRR4302541.341432/94‑1 (MQ=60)
                            CGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGC                                                                   <  SRR4302541.8296711/94‑1 (MQ=60)
                             GAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCA                                                                  >  SRR4302541.2281052/1‑94 (MQ=60)
                             GAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCA                                                                  >  SRR4302541.6406600/1‑94 (MQ=60)
                             GAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGGTCAGCCATCGAGGCA                                                                  >  SRR4302541.7876089/1‑94 (MQ=60)
                                CTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTA                                                               <  SRR4302541.5110234/94‑1 (MQ=60)
                                 TGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTAT                                                              <  SRR4302541.4008967/94‑1 (MQ=60)
                                 TGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTAT                                                              <  SRR4302541.2074940/94‑1 (MQ=60)
                                  GATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATC                                                             <  SRR4302541.7038845/94‑1 (MQ=60)
                                   ATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCT                                                            <  SRR4302541.1428885/94‑1 (MQ=60)
                                   ATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCT                                                            <  SRR4302541.152519/94‑1 (MQ=60)
                                     CGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATAGAGGCACTATCTCC                                                          >  SRR4302541.7685105/1‑94 (MQ=60)
                                      GACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCA                                                         <  SRR4302541.1733027/94‑1 (MQ=60)
                                      GACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCA                                                         >  SRR4302541.4403750/1‑94 (MQ=60)
                                      GACTGAACCGGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCA                                                         <  SRR4302541.4749396/94‑1 (MQ=60)
                                       ACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCAT                                                        >  SRR4302541.3058039/1‑94 (MQ=60)
                                        CTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTgacgccctcgacgcactctacccata                                                       >  SRR4302541.1774699/1‑68 (MQ=60)
                                        CTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATC                                                       >  SRR4302541.1774700/1‑94 (MQ=60)
                                        CTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATC                                                       >  SRR4302541.4051515/1‑94 (MQ=60)
                                        CTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATC                                                       <  SRR4302541.4243770/94‑1 (MQ=60)
                                         TGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCA                                                      >  SRR4302541.7664886/1‑94 (MQ=60)
                                         TGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCA                                                      >  SRR4302541.2749001/1‑94 (MQ=60)
                                          GAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAA                                                     <  SRR4302541.8893463/94‑1 (MQ=60)
                                          GAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAA                                                     >  SRR4302541.3460047/1‑94 (MQ=60)
                                           AACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAAC                                                    >  SRR4302541.355862/1‑94 (MQ=60)
                                           AACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAAC                                                    <  SRR4302541.2492000/94‑1 (MQ=60)
                                            ACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACT                                                   >  SRR4302541.3989059/1‑94 (MQ=60)
                                             CCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTT                                                  >  SRR4302541.7695296/1‑94 (MQ=60)
                                             CCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTT                                                  <  SRR4302541.7983210/94‑1 (MQ=60)
                                             CCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTT                                                  >  SRR4302541.4438616/1‑94 (MQ=60)
                                             CCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTT                                                  >  SRR4302541.2630769/1‑94 (MQ=60)
                                              CTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTC                                                 >  SRR4302541.1457503/1‑94 (MQ=60)
                                              CTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTC                                                 >  SRR4302541.2474327/1‑94 (MQ=60)
                                              CTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTC                                                 <  SRR4302541.4779124/94‑1 (MQ=60)
                                              CTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTAAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTC                                                 <  SRR4302541.1693204/94‑1 (MQ=60)
                                              CTGTGATAGCGAGTCGCTGATTCCCCGGCACATCGGCGAGGGCGCTTGTAAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTC                                                 <  SRR4302541.1693203/94‑1 (MQ=60)
                                               TGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCA                                                >  SRR4302541.5349673/1‑94 (MQ=60)
                                                GTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCAC                                               >  SRR4302541.5162542/1‑94 (MQ=60)
                                                 TGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACT                                              <  SRR4302541.8155528/94‑1 (MQ=60)
                                                 TGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACT                                              <  SRR4302541.6456232/94‑1 (MQ=60)
                                                 TGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACT                                              <  SRR4302541.5085979/94‑1 (MQ=60)
                                                  GATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTG                                             <  SRR4302541.1015186/94‑1 (MQ=60)
                                                   ATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGT                                            >  SRR4302541.4217952/1‑94 (MQ=60)
                                                   ATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGT                                            <  SRR4302541.1044401/94‑1 (MQ=60)
                                                   ATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGT                                            <  SRR4302541.6351929/94‑1 (MQ=60)
                                                   ATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGT                                            >  SRR4302541.3434810/1‑94 (MQ=60)
                                                   ATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGT                                            <  SRR4302541.4535804/94‑1 (MQ=60)
                                                     AGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTAT                                          <  SRR4302541.8572991/94‑1 (MQ=60)
                                                     AGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTAT                                          >  SRR4302541.3633200/1‑94 (MQ=60)
                                                       CGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGA                                        <  SRR4302541.6652085/94‑1 (MQ=60)
                                                         ATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACT                                      >  SRR4302541.8833894/1‑94 (MQ=60)
                                                         ATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACT                                      >  SRR4302541.1615286/1‑94 (MQ=60)
                                                          TACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTTAGCCATCGAGGCACTATCTCAATCAACTTCACTGTATGACTG                                     >  SRR4302541.8472709/1‑94 (MQ=60)
                                                          TACTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTG                                     <  SRR4302541.281768/94‑1 (MQ=60)
                                                            CTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCT                                   >  SRR4302541.2434579/1‑94 (MQ=60)
                                                            CTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCT                                   <  SRR4302541.3214860/94‑1 (MQ=60)
                                                            CTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCT                                   <  SRR4302541.6607163/94‑1 (MQ=60)
                                                            CTCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCT                                   >  SRR4302541.2675029/1‑94 (MQ=60)
                                                             TCTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTC                                  <  SRR4302541.1437002/94‑1 (MQ=60)
                                                              CTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCA                                 <  SRR4302541.4520100/94‑1 (MQ=60)
                                                              CTGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCA                                 <  SRR4302541.2686021/94‑1 (MQ=60)
                                                               TGATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAA                                >  SRR4302541.7839195/1‑94 (MQ=60)
                                                                 ATTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAAT                              >  SRR4302541.6989921/1‑94 (MQ=60)
                                                                  TTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATG                             <  SRR4302541.4984609/94‑1 (MQ=60)
                                                                  TTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATG                             >  SRR4302541.6109993/1‑94 (MQ=60)
                                                                  TTCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATG                             <  SRR4302541.4984610/94‑1 (MQ=60)
                                                                   TCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGT                            >  SRR4302541.166204/1‑94 (MQ=60)
                                                                   TCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGT                            >  SRR4302541.8157278/1‑94 (MQ=60)
                                                                   TCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGT                            >  SRR4302541.8485008/1‑94 (MQ=60)
                                                                   TCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGT                            <  SRR4302541.1496231/94‑1 (MQ=60)
                                                                   TCACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGT                            >  SRR4302541.3751189/1‑94 (MQ=60)
                                                                    CACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTC                           >  SRR4302541.3289419/1‑94 (MQ=60)
                                                                    CACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTC                           >  SRR4302541.3518997/1‑94 (MQ=60)
                                                                    CACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTC                           <  SRR4302541.3596856/94‑1 (MQ=60)
                                                                     CCCGGCACATGGGCGAGGGCGCTTGTCAGGGCGAAGAGTTCAGCCATCGAGGCACTATCT‑CATCAACTTCACTGTATGACTGCTCAAATGTCAG                         <  SRR4302541.4156880/94‑1 (MQ=60)
                                                                     ACCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGTACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCA                          <  SRR4302541.565870/94‑1 (MQ=60)
                                                                      CCGGCCCATCGGCGAGGGCACTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAG                         <  SRR4302541.1092309/94‑1 (MQ=60)
                                                                      CCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAG                         <  SRR4302541.4372303/94‑1 (MQ=60)
                                                                      CCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAG                         <  SRR4302541.4156881/94‑1 (MQ=60)
                                                                      CCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAG                         <  SRR4302541.4696024/94‑1 (MQ=60)
                                                                      CCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAG                         >  SRR4302541.3851691/1‑94 (MQ=60)
                                                                      CCGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAG                         <  SRR4302541.273284/94‑1 (MQ=60)
                                                                      CCGCCACATCGGCGAGGGCTCTTGTCAGAGCGCAGAGTGCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAG                         <  SRR4302541.273283/94‑1 (MQ=60)
                                                                       CGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGTGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGC                        >  SRR4302541.238277/1‑94 (MQ=60)
                                                                       CGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGC                        >  SRR4302541.3735319/1‑94 (MQ=60)
                                                                       CGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGC                        <  SRR4302541.878012/94‑1 (MQ=60)
                                                                       CGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGC                        >  SRR4302541.52243/1‑94 (MQ=60)
                                                                       CGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGC                        <  SRR4302541.3606491/94‑1 (MQ=60)
                                                                       CGGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGC                        >  SRR4302541.238278/1‑94 (MQ=60)
                                                                        GGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCG                       <  SRR4302541.2781053/94‑1 (MQ=60)
                                                                        GGCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCG                       >  SRR4302541.2255977/1‑94 (MQ=60)
                                                                         GCACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGA                      <  SRR4302541.5972970/94‑1 (MQ=60)
                                                                          CACATCGGCGAGGGCGCTTTTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGAT                     <  SRR4302541.2180460/94‑1 (MQ=60)
                                                                          CACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATTAACTTCACTGTATGACTGCTCAAATGTCAGCGAT                     <  SRR4302541.3898093/94‑1 (MQ=60)
                                                                          CACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGAT                     <  SRR4302541.4500429/94‑1 (MQ=60)
                                                                          CACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGAT                     <  SRR4302541.2350922/94‑1 (MQ=60)
                                                                           ACATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATG                    <  SRR4302541.6090613/94‑1 (MQ=60)
                                                                            CATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGC                   <  SRR4302541.5534082/94‑1 (MQ=60)
                                                                             ATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCT                  <  SRR4302541.2582162/94‑1 (MQ=60)
                                                                             ATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCT                  <  SRR4302541.2012242/94‑1 (MQ=60)
                                                                             ATCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCT                  >  SRR4302541.3021804/1‑94 (MQ=60)
                                                                              TCGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTG                 <  SRR4302541.4852998/94‑1 (MQ=60)
                                                                               CGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATTTCCATCAACTTCACTGCATGACTGCTCAAATGTCAGCGATGCTGA                >  SRR4302541.7888155/1‑94 (MQ=60)
                                                                               CGGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGA                >  SRR4302541.6248214/1‑94 (MQ=60)
                                                                                GGCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAG               <  SRR4302541.4946409/94‑1 (MQ=60)
                                                                                 GCGAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGA              >  SRR4302541.6686608/1‑94 (MQ=60)
                                                                                   GAGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAG            <  SRR4302541.1255772/94‑1 (MQ=60)
                                                                                    AGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCCCTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGG           <  SRR4302541.2549703/94‑1 (MQ=60)
                                                                                    AGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGG           >  SRR4302541.8361078/1‑94 (MQ=60)
                                                                                    AGGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGG           <  SRR4302541.3861944/94‑1 (MQ=60)
                                                                                    AGGGCGCGTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGG           <  SRR4302541.6034684/94‑1 (MQ=60)
                                                                                     GGGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGG          <  SRR4302541.1313526/94‑1 (MQ=60)
                                                                                      GGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGG         <  SRR4302541.1649772/94‑1 (MQ=60)
                                                                                      GGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGG         <  SRR4302541.2548716/94‑1 (MQ=60)
                                                                                      GGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGG         <  SRR4302541.361234/94‑1 (MQ=60)
                                                                                      GGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGG         <  SRR4302541.5830514/94‑1 (MQ=60)
                                                                                      GGCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGG         <  SRR4302541.5549813/94‑1 (MQ=60)
                                                                                       GCGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGA        >  SRR4302541.8033368/1‑94 (MQ=60)
                                                                                        GGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGAT       <  SRR4302541.2748387/94‑1 (MQ=60)
                                                                                        CGCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGAT       <  SRR4302541.3736596/94‑1 (MQ=60)
                                                                                         GCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATC      >  SRR4302541.3600139/1‑94 (MQ=60)
                                                                                         GCTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATC      >  SRR4302541.1754917/1‑94 (MQ=60)
                                                                                          CTTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATCT     <  SRR4302541.4823621/94‑1 (MQ=60)
                                                                                           TTGTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATCTG    >  SRR4302541.523549/1‑94 (MQ=60)
                                                                                             TTCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATCTGTT  <  SRR4302541.7471881/94‑1 (MQ=60)
                                                                                             GTCAGGGCGCAGAGTTCAGTCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGATGAGAAGGGGATCTGTT  >  SRR4302541.5680040/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTTAAACCACCGACCGGCTGGGCGCGACCGAACTGATCGACTGAACCTGTGATAGCGATACTCTGATTCACCGGCACATCGGCGAGGGCGCTTATCAGGGCGCAGAGTTCAGCCATCGAGGCACTATCTCCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATCTGTT  >  NC_000913/1016087‑1016273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑