Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,329,903 |
A→G |
S278G (AGT→GGT) |
topA → |
DNA topoisomerase type I omega protein |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,329,903 | 0 | A | G | 99.6%
| 971.2
/ ‑5.7
| 281 | S278G (AGT→GGT) | topA | DNA topoisomerase type I omega protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (138/142); total (139/142) |
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 |
Only 100 of 294 total aligned reads displayed.
CCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATG > NC_000913/1329813‑1329992
|
ccgGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGt > 2:4654717/1‑93 (MQ=255)
ggTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTaa < 2:6442868/93‑1 (MQ=255)
ggTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTaa > 1:4847731/1‑93 (MQ=255)
tCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAAc > 2:2317604/1‑93 (MQ=255)
caacaaAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAAcc > 1:8220757/1‑93 (MQ=255)
acaaAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTg < 1:7019246/93‑1 (MQ=255)
acaaAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTg < 1:3615957/93‑1 (MQ=255)
acaaAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTg < 2:3333420/93‑1 (MQ=255)
aaaGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGgc > 2:3842223/1‑93 (MQ=255)
aaCAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTc > 1:3424543/1‑93 (MQ=255)
aaCAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTc > 1:3072277/1‑93 (MQ=255)
aCAAACTCAGGCTGCGGTAAGTCTGCTTGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTcc < 2:4981468/93‑1 (MQ=255)
aCAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTAGCGCTcc > 2:4162128/1‑93 (MQ=255)
cAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCt < 1:7346007/93‑1 (MQ=255)
cAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCt < 1:2943753/93‑1 (MQ=255)
cAAACTCAGGCTGCGGTAAGTATGCTGGTAAAAGTGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTATACCTGGCGCTCCt > 2:6129719/1‑93 (MQ=255)
aaaCTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCtt > 2:3933037/1‑93 (MQ=255)
aaaCTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCtt < 2:3747662/93‑1 (MQ=255)
aaCTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCttt > 2:7586737/1‑93 (MQ=255)
aaCTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCGACAGCGTGCTGGAAAGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCttt > 1:7307520/1‑93 (MQ=255)
cTCAGGCTGGGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTtta < 1:1596586/93‑1 (MQ=255)
tCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTttat > 1:2590797/1‑93 (MQ=255)
aGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTttatta > 2:2856117/1‑93 (MQ=255)
gCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTAcc < 2:1185423/93‑1 (MQ=255)
cTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACct > 1:8182529/1‑93 (MQ=255)
tGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACctc < 2:1971997/93‑1 (MQ=255)
tGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACctc < 1:8541977/93‑1 (MQ=255)
tGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACctc < 2:586540/93‑1 (MQ=255)
gCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACctct > 2:5737643/1‑93 (MQ=255)
gCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACctct < 2:7380402/93‑1 (MQ=255)
ggTAAGTCTGCTGGAAAAAGTGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTAc > 1:5966388/1‑93 (MQ=255)
ggTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTAc < 1:184506/93‑1 (MQ=255)
gTAAGTCTGCTGGAAAAAGTGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTatg > 2:3599040/1‑91 (MQ=255)
gTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACg > 2:5667339/1‑93 (MQ=255)
gTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACg < 1:1167580/93‑1 (MQ=255)
aGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTg < 1:3690169/93‑1 (MQ=255)
tCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGca < 1:6757383/93‑1 (MQ=255)
ctgGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGcaacaa < 1:3285808/93‑1 (MQ=255)
ctgGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTACTTTTATTACCTCTACGCTGcaacaa > 1:4093111/1‑93 (MQ=255)
tgAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGc < 1:7993796/92‑1 (MQ=255)
ggAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGc > 1:4220509/1‑93 (MQ=255)
ggAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGc < 2:8612794/93‑1 (MQ=255)
aaaaaGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTg < 1:910448/93‑1 (MQ=255)
aaaaaGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTg > 1:8139069/1‑93 (MQ=255)
aaaaGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCACCAAGCTGc > 1:7458533/1‑93 (MQ=255)
aaaaGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGATCCTTTTATTACCTCTACGCTGCAACAAGCTGc > 2:7180437/1‑93 (MQ=255)
aaaGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGcc < 2:2154308/93‑1 (MQ=255)
aaGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCa > 2:7675172/1‑93 (MQ=255)
gcgcgcTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGTTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGc < 2:5343729/93‑1 (MQ=255)
gcgcgcTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGc < 2:6236397/93‑1 (MQ=255)
gcgcgcTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGc > 1:3799631/1‑93 (MQ=255)
gcgcgcTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGc > 2:796956/1‑93 (MQ=255)
gcgcTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCAc > 1:5369454/1‑93 (MQ=255)
gcgcTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCAc > 1:8327285/1‑93 (MQ=255)
gcTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCAccc > 1:5912667/1‑93 (MQ=255)
tACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGt > 2:41346/1‑93 (MQ=255)
tcAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTc < 1:5766681/92‑1 (MQ=255)
aCAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTc < 1:1443083/93‑1 (MQ=255)
cAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCt > 1:2653160/1‑93 (MQ=255)
aGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCtt < 1:6356326/93‑1 (MQ=255)
aGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCtt < 1:2904738/93‑1 (MQ=255)
gCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTg > 2:8508788/1‑93 (MQ=255)
gCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTg < 2:3273642/93‑1 (MQ=255)
tGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGAt > 2:5604246/1‑93 (MQ=255)
tGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTg < 2:4819220/93‑1 (MQ=255)
tGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTg < 1:3982062/93‑1 (MQ=255)
tGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTg > 2:6924980/1‑93 (MQ=255)
tGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTg > 1:5524599/1‑93 (MQ=255)
tGGAACATGAAGACAAACCGACAACCGGTAAACCTGGCGCTACTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTg < 2:5942345/93‑1 (MQ=255)
ggAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTgg > 1:6177994/1‑93 (MQ=255)
gAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGc > 1:3767339/1‑93 (MQ=255)
gAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGc > 1:1342407/1‑93 (MQ=255)
aCGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGt > 1:4704832/1‑93 (MQ=255)
gTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGa < 1:2342721/93‑1 (MQ=255)
gTGAAGACAAACCGACAACCGGTAAACCTGGAGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGa > 1:2115458/1‑93 (MQ=255)
tGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCACCAGGCTGCCAGCACCCGTCTTGGATTTGGCGTGaa > 1:4556592/1‑93 (MQ=255)
tGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaa > 1:6644183/1‑93 (MQ=255)
gAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaa > 2:1812624/1‑93 (MQ=255)
aaGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaa < 2:2985418/93‑1 (MQ=255)
aaGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaa < 2:2081085/93‑1 (MQ=255)
aGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaaa > 2:8369906/1‑93 (MQ=255)
gACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaaaa > 1:2177503/1‑93 (MQ=255)
gACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaaaa < 1:246958/93‑1 (MQ=255)
aCAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaaaaa < 2:1464094/93‑1 (MQ=255)
aCAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaaaaa < 1:4997797/93‑1 (MQ=255)
aaCCGAGAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTGGGATTTGGCGTGAAAAAACCCa < 1:6834282/93‑1 (MQ=255)
aaCCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCa > 1:1704017/1‑93 (MQ=255)
cGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatga > 1:8649006/1‑93 (MQ=255)
cGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatga < 1:1133287/93‑1 (MQ=255)
gACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgat < 1:780766/93‑1 (MQ=255)
aCAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatg > 1:4425960/1‑93 (MQ=255)
aCAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatg > 2:7008897/1‑93 (MQ=255)
aCAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatg > 2:7904340/1‑93 (MQ=255)
cAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatga < 2:4463825/93‑1 (MQ=255)
cAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatga < 2:8151341/93‑1 (MQ=255)
cAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGCCGTGAAAAAGACCataatga > 1:6318233/1‑93 (MQ=255)
aaCCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatgat > 1:2719609/1‑93 (MQ=255)
aCCGGTAATCCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatgatg < 2:3145027/93‑1 (MQ=255)
aCCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatgatg > 2:2598327/1‑93 (MQ=255)
aCCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatgatg > 1:1486649/1‑93 (MQ=255)
|
CCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATG > NC_000913/1329813‑1329992
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATGGCGC > NC_000913/1329811‑1329996
|
GTCCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGG > SRR4302541.5615537/1‑94 (MQ=60)
GTCCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGG > SRR4302541.2388697/1‑94 (MQ=60)
GTCCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGG > SRR4302541.3892305/1‑94 (MQ=60)
CGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAA > SRR4302541.4897148/1‑94 (MQ=60)
CGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAA > SRR4302541.7472303/1‑94 (MQ=60)
CGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCCGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAA > SRR4302541.2622741/1‑94 (MQ=60)
GTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAAC > SRR4302541.3386663/1‑94 (MQ=60)
GTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAAC > SRR4302541.3920528/1‑94 (MQ=60)
TCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACC > SRR4302541.8310415/1‑94 (MQ=60)
CAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCT < SRR4302541.3692330/94‑1 (MQ=60)
CAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCT > SRR4302541.8433175/1‑94 (MQ=60)
CAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCT < SRR4302541.6322130/94‑1 (MQ=60)
CAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCT < SRR4302541.4913333/94‑1 (MQ=60)
AACAAAGAACAAACTCAGGCTGCNGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTG < SRR4302541.3804390/94‑1 (MQ=60)
AACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTG > SRR4302541.6129680/1‑94 (MQ=60)
AACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTG > SRR4302541.6498488/1‑94 (MQ=60)
AACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTG > SRR4302541.3930355/1‑94 (MQ=60)
ACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGG < SRR4302541.3652624/94‑1 (MQ=60)
ACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGG < SRR4302541.3652623/94‑1 (MQ=60)
ACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGG < SRR4302541.7093880/94‑1 (MQ=60)
ACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGCACACCTGG > SRR4302541.2521637/1‑94 (MQ=60)
CAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGC < SRR4302541.7965291/94‑1 (MQ=60)
AAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCG < SRR4302541.5074736/94‑1 (MQ=60)
AAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCG < SRR4302541.1463901/94‑1 (MQ=60)
AAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCG < SRR4302541.1463900/94‑1 (MQ=60)
AAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGC < SRR4302541.8142660/94‑1 (MQ=60)
AGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCT > SRR4302541.7483049/1‑94 (MQ=60)
GAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTC > SRR4302541.3103440/1‑94 (MQ=60)
GAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTC > SRR4302541.3103732/1‑94 (MQ=60)
GAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTC > SRR4302541.3458735/1‑94 (MQ=60)
GAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGGGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTC > SRR4302541.3458979/1‑94 (MQ=60)
AACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCC > SRR4302541.6387240/1‑94 (MQ=60)
CAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTT < SRR4302541.2973353/94‑1 (MQ=60)
CAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTT < SRR4302541.7424469/94‑1 (MQ=60)
AAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGTGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTT > SRR4302541.2271533/1‑94 (MQ=60)
AAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGTGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTT > SRR4302541.4813036/1‑94 (MQ=60)
AAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCGACAGCGTGCTGGAAAGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTT > SRR4302541.7385527/1‑94 (MQ=60)
AACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTT > SRR4302541.5533565/1‑94 (MQ=60)
AACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGAAAAACCGACAACCGGTAAACCTGGCGCTCCTTTT > SRR4302541.7598737/1‑94 (MQ=60)
ACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAACCCGACAACCGGTAAACCTGGCGCTCCTTTTA < SRR4302541.2953413/94‑1 (MQ=60)
CTCAGGCTGGGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTAT < SRR4302541.1612481/94‑1 (MQ=60)
CTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTAT > SRR4302541.2616758/1‑94 (MQ=60)
CTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTAT > SRR4302541.2235666/1‑94 (MQ=60)
CAGGCTGCGGTAAGTCTGCTGGAAAAAGTGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGCAAACCTGGCGCTCCTTTTATTA > SRR4302541.64062/1‑94 (MQ=60)
CAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTA < SRR4302541.4057632/94‑1 (MQ=60)
AGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTAC < SRR4302541.1399280/94‑1 (MQ=60)
AGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTAC > SRR4302541.1319197/1‑94 (MQ=60)
GCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCT > SRR4302541.8271863/1‑94 (MQ=60)
TGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCT < SRR4302541.2650006/94‑1 (MQ=60)
TGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCT < SRR4302541.1682106/94‑1 (MQ=60)
TGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCT < SRR4302541.8633809/94‑1 (MQ=60)
TCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTA < SRR4302541.6113619/94‑1 (MQ=60)
CGGTAAGTCTGCTGGAAAAAGTGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTAC > SRR4302541.6027211/1‑94 (MQ=60)
GGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACG < SRR4302541.7392567/94‑1 (MQ=60)
GGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACG < SRR4302541.5508032/94‑1 (MQ=60)
GGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACG < SRR4302541.185891/94‑1 (MQ=60)
GTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGC > SRR4302541.2094852/1‑94 (MQ=60)
GTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGC > SRR4302541.8398454/1‑94 (MQ=60)
GTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGC > SRR4302541.5983746/1‑94 (MQ=60)
GTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGC > SRR4302541.6728258/1‑94 (MQ=60)
GTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGC < SRR4302541.1178808/94‑1 (MQ=60)
TACGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCT < SRR4302541.1249015/94‑1 (MQ=60)
TAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCT < SRR4302541.6512528/94‑1 (MQ=60)
TAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCT < SRR4302541.893655/94‑1 (MQ=60)
AGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGC < SRR4302541.3727506/94‑1 (MQ=60)
AGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGC > SRR4302541.4613690/1‑94 (MQ=60)
GTCTGCTGGAAAAGGCGCGCCACAGCGTGCTGGAACGTGAAGACAAACCGACATCCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCA < SRR4302541.198211/94‑1 (MQ=60)
TCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAA < SRR4302541.6829648/94‑1 (MQ=60)
TCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAA < SRR4302541.2715052/94‑1 (MQ=60)
TGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACA > SRR4302541.4373700/1‑94 (MQ=60)
GCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAA < SRR4302541.4559924/94‑1 (MQ=60)
GCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAA < SRR4302541.7085819/94‑1 (MQ=60)
GCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAA > SRR4302541.275400/1‑94 (MQ=60)
GCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAA < SRR4302541.1856937/94‑1 (MQ=60)
GCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAA < SRR4302541.5665350/94‑1 (MQ=60)
GCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTACTTTTATTACCTCTACGCTGCAACAA > SRR4302541.4133517/1‑94 (MQ=60)
CTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAG > SRR4302541.3805552/1‑94 (MQ=60)
CTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAG < SRR4302541.1684863/94‑1 (MQ=60)
CTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAG > SRR4302541.2153378/1‑94 (MQ=60)
CTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAG < SRR4302541.3318916/94‑1 (MQ=60)
TGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGC > SRR4302541.4262510/1‑94 (MQ=60)
TGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCT < SRR4302541.8081792/94‑1 (MQ=60)
GGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCT < SRR4302541.4169187/94‑1 (MQ=60)
GAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTG > SRR4302541.8228126/1‑94 (MQ=60)
AAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCACCAAGCTGC > SRR4302541.7538197/1‑94 (MQ=60)
AAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGC < SRR4302541.918927/94‑1 (MQ=60)
AAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCA > SRR4302541.3582287/1‑94 (MQ=60)
AAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCA > SRR4302541.4061087/1‑94 (MQ=60)
AAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACAGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCA < SRR4302541.6271166/94‑1 (MQ=60)
AGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGC > SRR4302541.3837871/1‑94 (MQ=60)
AGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGC < SRR4302541.4680295/94‑1 (MQ=60)
CGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCAC > SRR4302541.8417745/1‑94 (MQ=60)
CGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCAC > SRR4302541.5424578/1‑94 (MQ=60)
GCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACC < SRR4302541.6010420/94‑1 (MQ=60)
CGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCC > SRR4302541.5036802/1‑94 (MQ=60)
CGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCC > SRR4302541.5972861/1‑94 (MQ=60)
CGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCAACC > SRR4302541.595529/1‑94 (MQ=60)
TCAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCT < SRR4302541.5825364/94‑1 (MQ=60)
ACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCT > SRR4302541.2679560/1‑94 (MQ=60)
ACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCT < SRR4302541.1457132/94‑1 (MQ=60)
CAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTT < SRR4302541.3126129/94‑1 (MQ=60)
CAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTT < SRR4302541.5392298/94‑1 (MQ=60)
AGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTG < SRR4302541.6421312/94‑1 (MQ=60)
AGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTG < SRR4302541.2933936/94‑1 (MQ=60)
AGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTG > SRR4302541.8495804/1‑94 (MQ=60)
CGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGTAACAAGCTGCCAGCACCCGTCTTGGA < SRR4302541.8363469/94‑1 (MQ=60)
CGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGA < SRR4302541.1167086/94‑1 (MQ=60)
GTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCCGCACACGACTTGGAT > SRR4302541.8154539/1‑94 (MQ=60)
GTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGAT > SRR4302541.792532/1‑94 (MQ=60)
GTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGAT > SRR4302541.8720482/1‑94 (MQ=60)
GTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGAT > SRR4302541.8708928/1‑94 (MQ=60)
GTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGAT > SRR4302541.2197589/1‑94 (MQ=60)
GTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTACTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGAT > SRR4302541.3384144/1‑94 (MQ=60)
TGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATT < SRR4302541.7356151/94‑1 (MQ=60)
TGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATT > SRR4302541.7393975/1‑94 (MQ=60)
GCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTT < SRR4302541.383364/94‑1 (MQ=60)
CTGGCTCGTGAAGACAAACCGCCAACCGGTAACCCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTG < SRR4302541.7877004/94‑1 (MQ=60)
CTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTG > SRR4302541.5581156/1‑94 (MQ=60)
CTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTG < SRR4302541.2377884/94‑1 (MQ=60)
CTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTG < SRR4302541.7877003/94‑1 (MQ=60)
TGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGG > SRR4302541.6241113/1‑94 (MQ=60)
TGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGG < SRR4302541.4021531/94‑1 (MQ=60)
GGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGC > SRR4302541.3805177/1‑94 (MQ=60)
GGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGC > SRR4302541.1355631/1‑94 (MQ=60)
GAACGTGAAGACAAACCGGCAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCCCCCGTCTTGGATTTGGCG < SRR4302541.2941510/94‑1 (MQ=60)
GAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCG < SRR4302541.247022/94‑1 (MQ=60)
GAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCCGCCAGCACCCGTCTTGGATTTGGCG < SRR4302541.8246394/94‑1 (MQ=60)
AACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGT < SRR4302541.8273277/94‑1 (MQ=60)
AACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGT > SRR4302541.8786974/1‑94 (MQ=60)
AACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGT > SRR4302541.4752795/1‑94 (MQ=60)
ACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTG < SRR4302541.2554290/94‑1 (MQ=60)
ACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTG < SRR4302541.287151/94‑1 (MQ=60)
CGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGA < SRR4302541.1831306/94‑1 (MQ=60)
CGTGAAGACAAACCGACAACCGGTAAACCTGGAGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGA > SRR4302541.2135943/1‑94 (MQ=60)
GTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCACCAGGCTGCCAGCACCCGTCTTGGATTTGGCGTGAA > SRR4302541.4602705/1‑94 (MQ=60)
GTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAA > SRR4302541.4602704/1‑94 (MQ=60)
GTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAA > SRR4302541.6712332/1‑94 (MQ=60)
GTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAA < SRR4302541.2365482/94‑1 (MQ=60)
TGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGCAA > SRR4302541.938186/1‑94 (MQ=60)
GAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAA < SRR4302541.1409429/94‑1 (MQ=60)
AGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAA > SRR4302541.6792105/1‑94 (MQ=60)
AGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAA > SRR4302541.2198542/1‑94 (MQ=60)
GACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAA < SRR4302541.248932/94‑1 (MQ=60)
ACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAAC > SRR4302541.7099398/1‑94 (MQ=60)
ACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAAC < SRR4302541.5049142/94‑1 (MQ=60)
AAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCA > SRR4302541.1720705/1‑94 (MQ=60)
AACCGAGAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTGGGATTTGGCGTGAAAAAACCCAT < SRR4302541.6907402/94‑1 (MQ=60)
AACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCAT < SRR4302541.6907401/94‑1 (MQ=60)
CCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGA < SRR4302541.7040797/94‑1 (MQ=60)
CCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGA > SRR4302541.8741619/1‑94 (MQ=60)
CGACAACCGGTAAACCTGGCGCTTCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGAT < SRR4302541.4164769/94‑1 (MQ=60)
CGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGAT < SRR4302541.4365592/94‑1 (MQ=60)
CGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGAT < SRR4302541.1144010/94‑1 (MQ=60)
CGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGAT > SRR4302541.1558476/1‑94 (MQ=60)
GACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATG > SRR4302541.4470415/1‑94 (MQ=60)
GACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATG > SRR4302541.3728196/1‑94 (MQ=60)
GACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATG < SRR4302541.1586192/94‑1 (MQ=60)
GACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATG < SRR4302541.788033/94‑1 (MQ=60)
GACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATG > SRR4302541.2736473/1‑94 (MQ=60)
ACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACaatactga > SRR4302541.2578294/1‑86 (MQ=60)
ACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGCCGTGAAAAAGACCATAATGA > SRR4302541.6382829/1‑94 (MQ=60)
CAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGAT > SRR4302541.2746749/1‑94 (MQ=60)
CAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGAT < SRR4302541.3006404/94‑1 (MQ=60)
CAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGAT < SRR4302541.5843144/94‑1 (MQ=60)
AACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATG > SRR4302541.8251778/1‑94 (MQ=60)
AACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATG > SRR4302541.1501281/1‑94 (MQ=60)
ACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATGG < SRR4302541.4793336/94‑1 (MQ=60)
CCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATGGC > SRR4302541.8013256/1‑94 (MQ=60)
CCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATGGC < SRR4302541.5016380/94‑1 (MQ=60)
CGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATGGCG < SRR4302541.605918/94‑1 (MQ=60)
GGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATGGCGC > SRR4302541.2019587/1‑94 (MQ=60)
GGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATGGCGC > SRR4302541.3894106/1‑94 (MQ=60)
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GTCCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATGGCGC > NC_000913/1329811‑1329996
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |