Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,397,365 A→G G62G (GGT→GGC)  fnr ← Fnr

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,397,3650AG99.4% 1172.2 / ‑6.0 343G62G (GGT→GGC) fnrFnr
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (151/190);  total (151/192)
Fisher's exact test for biased strand distribution p-value = 5.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 358 total aligned reads displayed.

GAAACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGT  >  NC_000913/1397275‑1397454
                                                                                          |                                                                                         
 aaaCCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCa                                                                                        >  2:6045684/1‑93 (MQ=255)
     cAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCt                                                                                    <  1:6380029/93‑1 (MQ=255)
      aGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCtt                                                                                   >  2:967799/1‑93 (MQ=255)
         gATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTaaa                                                                                <  1:8624285/93‑1 (MQ=255)
         gATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTaaa                                                                                <  2:5895134/93‑1 (MQ=255)
           tttGCTCGTCGCCTTGCTCAGTGCTGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACa                                                                              <  2:4758658/93‑1 (MQ=255)
             tGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGc                                                                            <  1:1958054/93‑1 (MQ=255)
              gCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCg                                                                           <  2:4481226/93‑1 (MQ=255)
               cTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCGTAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGt                                                                          >  2:4127982/1‑93 (MQ=255)
               cTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGCACCGGAGCGGATGGCCTCACGCGATTTCAGTTCATCGCCAGACTTACACAGCgc                                                                          >  2:4342981/1‑92 (MQ=255)
                tcgtcgCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTc                                                                         <  2:318559/93‑1 (MQ=255)
                tcgtcgCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTc                                                                         >  1:4982522/1‑93 (MQ=255)
                tcgtcgCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTc                                                                         <  1:2472490/93‑1 (MQ=255)
                 cgtcgCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCt                                                                        <  2:3929154/93‑1 (MQ=255)
                  gtcgCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTg                                                                       >  2:7265617/1‑93 (MQ=255)
                  gtcgCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTg                                                                       >  2:3853032/1‑93 (MQ=255)
                     gCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGcc                                                                    >  1:1015747/1‑93 (MQ=255)
                     gCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGcc                                                                    <  1:1240344/93‑1 (MQ=255)
                     gCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGcc                                                                    >  1:5822537/1‑93 (MQ=255)
                      ccTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGAGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCt                                                                   >  1:4695462/1‑93 (MQ=255)
                       cTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCtt                                                                  <  1:6922615/93‑1 (MQ=255)
                        ttGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCttt                                                                 >  1:1522791/1‑93 (MQ=255)
                        ttGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCttt                                                                 >  2:833829/1‑93 (MQ=255)
                         tGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTc                                                                <  1:5393435/93‑1 (MQ=255)
                         tGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTc                                                                <  2:5951309/93‑1 (MQ=255)
                          tcTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCt                                                               <  1:3506263/92‑1 (MQ=255)
                          gCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCt                                                               <  2:5571571/93‑1 (MQ=255)
                           cTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTg                                                              <  1:3039944/93‑1 (MQ=255)
                            tCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGa                                                             >  1:4033709/1‑93 (MQ=255)
                             cAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGaa                                                            <  1:4645027/93‑1 (MQ=255)
                             cAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGaa                                                            <  2:172825/93‑1 (MQ=255)
                             cAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGaa                                                            <  2:5230429/93‑1 (MQ=255)
                             cAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGaa                                                            >  1:6215475/1‑93 (MQ=255)
                               gTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATa                                                          <  2:668795/93‑1 (MQ=255)
                               gTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATa                                                          >  2:5156445/1‑93 (MQ=255)
                               gTGATGGCATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATa                                                          <  2:2814657/93‑1 (MQ=255)
                                   tGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGct                                                      >  2:1494782/1‑93 (MQ=255)
                                     gTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGcttc                                                    <  2:485260/93‑1 (MQ=255)
                                      tataACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGcttct                                                   >  2:6239984/1‑93 (MQ=255)
                                      tataACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGcttct                                                   <  1:4818495/93‑1 (MQ=255)
                                       ataACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGcttctt                                                  >  1:6999694/1‑93 (MQ=255)
                                        taACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCttcttc                                                 >  1:1047657/1‑93 (MQ=255)
                                        taACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCttcttc                                                 >  1:4164249/1‑93 (MQ=255)
                                        taACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCttcttc                                                 <  1:4313865/93‑1 (MQ=255)
                                        taACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCttcttc                                                 >  1:72931/1‑93 (MQ=255)
                                         aaCTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTcc                                                >  1:7649201/1‑93 (MQ=255)
                                           cTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGc                                              >  2:6583623/1‑93 (MQ=255)
                                            ttttAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCt                                             >  1:2848066/1‑93 (MQ=255)
                                            ttttAATCGTACCGGAGCGGATGGCATAAAGCGACTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCt                                             >  1:774672/1‑93 (MQ=255)
                                               tAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCATCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCaa                                          <  1:8784276/93‑1 (MQ=255)
                                                aaTCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAAt                                         <  1:5973603/93‑1 (MQ=255)
                                                 aTCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATg                                        >  2:2890768/1‑93 (MQ=255)
                                                  tCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGa                                       <  2:5790276/93‑1 (MQ=255)
                                                  tCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGa                                       <  2:5667781/93‑1 (MQ=255)
                                                  tCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGa                                       >  1:4433327/1‑93 (MQ=255)
                                                   cGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGat                                      >  1:6723439/1‑93 (MQ=255)
                                                   cGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGat                                      <  1:8529511/93‑1 (MQ=255)
                                                    gTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGata                                     >  2:2368650/1‑93 (MQ=255)
                                                     tACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGatat                                    >  2:1607842/1‑93 (MQ=255)
                                                     tACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGatat                                    <  2:7725155/93‑1 (MQ=255)
                                                      aCCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGAtatt                                   <  2:1351308/93‑1 (MQ=255)
                                                      aCCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGAtatt                                   >  1:8245668/1‑93 (MQ=255)
                                                      aCCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGAtatt                                   <  1:5289981/93‑1 (MQ=255)
                                                       ccGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGAtatta                                  >  2:7438983/1‑93 (MQ=255)
                                                       ccGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGAtatta                                  <  1:2316611/93‑1 (MQ=255)
                                                         ggAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATc                                <  2:5631415/93‑1 (MQ=255)
                                                            gCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAg                             <  2:3653207/93‑1 (MQ=255)
                                                            gCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAg                             >  1:4370867/1‑93 (MQ=255)
                                                              ggATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCt                           >  2:7241379/1‑93 (MQ=255)
                                                              ggATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCt                           <  2:538384/93‑1 (MQ=255)
                                                               gagtgCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTg                          <  2:7101743/89‑1 (MQ=255)
                                                               gATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTg                          >  2:252474/1‑93 (MQ=255)
                                                                  ggCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATc                       <  1:3589634/93‑1 (MQ=255)
                                                                   gCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCa                      >  2:2700819/1‑93 (MQ=255)
                                                                     aTAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCGAg                    >  1:7127536/1‑93 (MQ=255)
                                                                     aTAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAg                    <  2:1836332/93‑1 (MQ=255)
                                                                      tAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGc                   <  1:2621119/93‑1 (MQ=255)
                                                                      tAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGc                   >  1:1619931/1‑93 (MQ=255)
                                                                       aaaGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCt                  <  2:4028974/93‑1 (MQ=255)
                                                                        aaGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTc                 >  1:7965250/1‑93 (MQ=255)
                                                                        aaGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTc                 >  2:8171073/1‑93 (MQ=255)
                                                                        aaGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTc                 >  1:5142402/1‑93 (MQ=255)
                                                                         aGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCa                <  2:3046471/93‑1 (MQ=255)
                                                                         aGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCa                <  1:4586642/93‑1 (MQ=255)
                                                                         aGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCa                <  1:3291378/93‑1 (MQ=255)
                                                                           cGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATg              <  2:1043078/93‑1 (MQ=255)
                                                                            gATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGt             <  1:1257512/93‑1 (MQ=255)
                                                                            gATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGt             >  1:520413/1‑93 (MQ=255)
                                                                             aTTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGtt            >  1:527283/1‑93 (MQ=255)
                                                                                tAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCGAGCTCATGTTCGt         >  1:5579108/1‑93 (MQ=255)
                                                                                  aGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTg       <  2:2279115/93‑1 (MQ=255)
                                                                                   gTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGa      <  2:6436696/93‑1 (MQ=255)
                                                                                    ttCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAg     <  2:5097326/93‑1 (MQ=255)
                                                                                    ttCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAg     <  2:3465718/93‑1 (MQ=255)
                                                                                    ttCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAg     <  1:742990/93‑1 (MQ=255)
                                                                                     tcatcgCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAgt    <  2:2114039/93‑1 (MQ=255)
                                                                                      catcgCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAgtg   >  1:3198312/1‑93 (MQ=255)
                                                                                       atcgCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAgtgt  <  2:6902384/93‑1 (MQ=255)
                                                                                       atcgCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAgtgt  >  1:6615569/1‑93 (MQ=255)
                                                                                       atcgCCAGCCTTAAACAGCGGCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGAGCAAGCTCATGTTCGTTGAgtgt  <  2:7662098/93‑1 (MQ=255)
                                                                                          |                                                                                         
GAAACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGT  >  NC_000913/1397275‑1397454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATGGAAACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAAC  >  NC_000913/1397272‑1397458
                                                                                             |                                                                                             
ATGTAAGCCAGTGAGTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCG                                                                                               <  SRR4302541.1187751/94‑1 (MQ=60)
ATGGAAACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCG                                                                                               >  SRR4302541.1149783/1‑94 (MQ=60)
  TGAAACCAGTGATTTGCTCGTCTCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCC                                                                                             <  SRR4302541.4597168/94‑1 (MQ=60)
  GGAAACCAGTGATTTGCTCGTCGCCTTTCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCC                                                                                             <  SRR4302541.4597167/94‑1 (MQ=60)
  GGAAACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCC                                                                                             <  SRR4302541.2012491/94‑1 (MQ=60)
  GGAAACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCC                                                                                             <  SRR4302541.4856070/94‑1 (MQ=60)
   GAAACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCA                                                                                            <  SRR4302541.6257170/94‑1 (MQ=60)
    AAACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAG                                                                                           >  SRR4302541.1186796/1‑94 (MQ=60)
    AAACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAG                                                                                           <  SRR4302541.5386588/94‑1 (MQ=60)
     AACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGC                                                                                          >  SRR4302541.2562054/1‑94 (MQ=60)
       CCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCT                                                                                        <  SRR4302541.4410703/94‑1 (MQ=60)
        CAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTT                                                                                       >  SRR4302541.7696750/1‑94 (MQ=60)
        CAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTT                                                                                       >  SRR4302541.6153421/1‑94 (MQ=60)
        CAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTT                                                                                       <  SRR4302541.4298109/94‑1 (MQ=60)
        CAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTT                                                                                       <  SRR4302541.6445206/94‑1 (MQ=60)
         AGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTA                                                                                      >  SRR4302541.5323175/1‑94 (MQ=60)
          GTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAA                                                                                     <  SRR4302541.173516/94‑1 (MQ=60)
           TGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAA                                                                                    <  SRR4302541.4821834/94‑1 (MQ=60)
            GATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAAC                                                                                   <  SRR4302541.8716730/94‑1 (MQ=60)
            GATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAAC                                                                                   <  SRR4302541.5006736/94‑1 (MQ=60)
              TTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAG                                                                                 <  SRR4302541.5229318/94‑1 (MQ=60)
               TTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGC                                                                                >  SRR4302541.7105270/1‑94 (MQ=60)
                TGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCG                                                                               <  SRR4302541.1041082/94‑1 (MQ=60)
                TGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCG                                                                               >  SRR4302541.4654193/1‑94 (MQ=60)
                TGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCG                                                                               <  SRR4302541.1976933/94‑1 (MQ=60)
                 GCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGT                                                                              >  SRR4302541.1196940/1‑94 (MQ=60)
                  CTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTC                                                                             <  SRR4302541.7463627/94‑1 (MQ=60)
                  CTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTC                                                                             >  SRR4302541.5033629/1‑94 (MQ=60)
                   TCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTGCCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCT                                                                            <  SRR4302541.2671296/94‑1 (MQ=60)
                   TCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCT                                                                            <  SRR4302541.1936195/94‑1 (MQ=60)
                   TCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCT                                                                            <  SRR4302541.258175/94‑1 (MQ=60)
                   TCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCT                                                                            <  SRR4302541.2497239/94‑1 (MQ=60)
                    CGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTG                                                                           <  SRR4302541.5880638/94‑1 (MQ=60)
                    CGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTG                                                                           <  SRR4302541.522075/94‑1 (MQ=60)
                     GTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGG                                                                          >  SRR4302541.3298321/1‑94 (MQ=60)
                     GTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGG                                                                          <  SRR4302541.3736804/94‑1 (MQ=60)
                      TCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGC                                                                         >  SRR4302541.4388732/1‑94 (MQ=60)
                      TCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGC                                                                         <  SRR4302541.452313/94‑1 (MQ=60)
                       CGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCC                                                                        >  SRR4302541.5881724/1‑94 (MQ=60)
                       CGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCC                                                                        >  SRR4302541.4193713/1‑94 (MQ=60)
                       CGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCC                                                                        <  SRR4302541.6493275/94‑1 (MQ=60)
                       CGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCC                                                                        <  SRR4302541.5891925/94‑1 (MQ=60)
                       CGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCC                                                                        >  SRR4302541.1025140/1‑94 (MQ=60)
                       CGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCC                                                                        >  SRR4302541.4701060/1‑94 (MQ=60)
                       CGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCC                                                                        >  SRR4302541.8532287/1‑94 (MQ=60)
                        GCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCT                                                                       >  SRR4302541.4743317/1‑94 (MQ=60)
                        GCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCT                                                                       <  SRR4302541.2420365/94‑1 (MQ=60)
                        GCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCT                                                                       <  SRR4302541.1252591/94‑1 (MQ=60)
                        GCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGAGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCT                                                                       >  SRR4302541.4743318/1‑94 (MQ=60)
                          CTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTT                                                                     >  SRR4302541.1538009/1‑94 (MQ=60)
                          CTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTT                                                                     <  SRR4302541.6996494/94‑1 (MQ=60)
                          CTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTT                                                                     >  SRR4302541.6890395/1‑94 (MQ=60)
                          CTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTT                                                                     >  SRR4302541.2282183/1‑94 (MQ=60)
                           TTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTC                                                                    >  SRR4302541.1516594/1‑94 (MQ=60)
                            TGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCT                                                                   <  SRR4302541.5281477/94‑1 (MQ=60)
                            TGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCT                                                                   <  SRR4302541.5448790/94‑1 (MQ=60)
                            TGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCT                                                                   <  SRR4302541.5611353/94‑1 (MQ=60)
                             TCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTG                                                                  <  SRR4302541.3541476/94‑1 (MQ=60)
                             GCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTG                                                                  <  SRR4302541.1621954/94‑1 (MQ=60)
                              CTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGA                                                                 >  SRR4302541.4073548/1‑94 (MQ=60)
                              CTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGA                                                                 <  SRR4302541.3070659/94‑1 (MQ=60)
                               TCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAA                                                                <  SRR4302541.86563/94‑1 (MQ=60)
                               TCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAA                                                                >  SRR4302541.6278990/1‑94 (MQ=60)
                               TCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAA                                                                <  SRR4302541.5628868/94‑1 (MQ=60)
                                CAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAAT                                                               >  SRR4302541.8743642/1‑94 (MQ=60)
                                CAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAAT                                                               <  SRR4302541.7807838/94‑1 (MQ=60)
                                CAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAAT                                                               <  SRR4302541.4692321/94‑1 (MQ=60)
                                 AGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATA                                                              <  SRR4302541.636734/94‑1 (MQ=60)
                                  GTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAG                                                             <  SRR4302541.6300228/94‑1 (MQ=60)
                                  GTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAG                                                             <  SRR4302541.3613409/94‑1 (MQ=60)
                                  ATGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAG                                                             <  SRR4302541.8787442/94‑1 (MQ=60)
                                   TGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGG                                                            <  SRR4302541.7458985/94‑1 (MQ=60)
                                   TGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGG                                                            >  SRR4302541.2218056/1‑94 (MQ=60)
                                     ATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCT                                                          >  SRR4302541.3220315/1‑94 (MQ=60)
                                     ATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCT                                                          <  SRR4302541.3264151/94‑1 (MQ=60)
                                      TGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTT                                                         <  SRR4302541.5182934/94‑1 (MQ=60)
                                      TGATATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTT                                                         <  SRR4302541.5182933/94‑1 (MQ=60)
                                       GGTATAACTTTTAATCGTACCGGAGCGGATGGCATACAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTT                                                        >  SRR4302541.7815953/1‑94 (MQ=60)
                                       GGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTATACAGCGTCTGGCCTTTCTGAATAGGCTTT                                                        >  SRR4302541.889979/1‑94 (MQ=60)
                                       GGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTC                                                        >  SRR4302541.7815954/1‑94 (MQ=60)
                                       GGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTC                                                        >  SRR4302541.1452362/1‑94 (MQ=60)
                                       GGAATAACGTTTAATCGTACCGGAGCGGATGGCATAAAGCGATGTAAGATCATCGCCAGCCGCAAACAGCGACTGGCCgtgctgaacaggcgac                                                        >  SRR4302541.7917938/1‑78 (MQ=40)
                                        GTATGACTGTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCT                                                       <  SRR4302541.7860751/94‑1 (MQ=60)
                                        GTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCT                                                       <  SRR4302541.7860752/94‑1 (MQ=60)
                                        GTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCT                                                       >  SRR4302541.7365125/1‑94 (MQ=60)
                                        GTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCT                                                       >  SRR4302541.3731204/1‑94 (MQ=60)
                                         TATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTT                                                      <  SRR4302541.5336212/94‑1 (MQ=60)
                                         TATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTT                                                      >  SRR4302541.7074192/1‑94 (MQ=60)
                                         TATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTT                                                      <  SRR4302541.4867616/94‑1 (MQ=60)
                                          ATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTC                                                     >  SRR4302541.73543/1‑94 (MQ=60)
                                          ATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTC                                                     >  SRR4302541.1057383/1‑94 (MQ=60)
                                          ATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTC                                                     >  SRR4302541.1057384/1‑94 (MQ=60)
                                          ATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTC                                                     >  SRR4302541.6728602/1‑94 (MQ=60)
                                          ATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTC                                                     >  SRR4302541.4205481/1‑94 (MQ=60)
                                           TAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCC                                                    <  SRR4302541.2973892/94‑1 (MQ=60)
                                           TAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCC                                                    >  SRR4302541.7730707/1‑94 (MQ=60)
                                           TAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCC                                                    <  SRR4302541.4356948/94‑1 (MQ=60)
                                           TAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCC                                                    <  SRR4302541.803940/94‑1 (MQ=60)
                                            AACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCG                                                   <  SRR4302541.507942/94‑1 (MQ=60)
                                             ACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGC                                                  >  SRR4302541.7087299/1‑94 (MQ=60)
                                              CTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCT                                                 >  SRR4302541.8455918/1‑94 (MQ=60)
                                              CTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCT                                                 >  SRR4302541.2876709/1‑94 (MQ=60)
                                              CTTTTAATCGTACCGGAGCGGATGGCATAAAGCGACTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCT                                                 >  SRR4302541.781902/1‑94 (MQ=60)
                                               TTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTC                                                >  SRR4302541.7012607/1‑94 (MQ=60)
                                                TTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCA                                               <  SRR4302541.254812/94‑1 (MQ=60)
                                                  TAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAAT                                             <  SRR4302541.8878134/94‑1 (MQ=60)
                                                  TAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAAT                                             >  SRR4302541.8897913/1‑94 (MQ=60)
                                                  TAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAAT                                             >  SRR4302541.8904486/1‑94 (MQ=60)
                                                  TAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCATCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAAT                                             <  SRR4302541.8878135/94‑1 (MQ=60)
                                                   AATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATG                                            <  SRR4302541.3524216/94‑1 (MQ=60)
                                                   AATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATG                                            <  SRR4302541.6034571/94‑1 (MQ=60)
                                                   AATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATG                                            <  SRR4302541.3038427/94‑1 (MQ=60)
                                                   AATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATG                                            <  SRR4302541.2482688/94‑1 (MQ=60)
                                                   AATCATACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATG                                            <  SRR4302541.3414362/94‑1 (MQ=60)
                                                    ATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGA                                           >  SRR4302541.4477884/1‑94 (MQ=60)
                                                    ATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGA                                           <  SRR4302541.3153271/94‑1 (MQ=60)
                                                     TCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGAT                                          <  SRR4302541.1110684/94‑1 (MQ=60)
                                                     TCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGAT                                          >  SRR4302541.6795188/1‑94 (MQ=60)
                                                     TCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGAT                                          <  SRR4302541.4603832/94‑1 (MQ=60)
                                                     TCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGAT                                          >  SRR4302541.4072653/1‑94 (MQ=60)
                                                     ACGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGAT                                          <  SRR4302541.858039/94‑1 (MQ=60)
                                                      CGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATA                                         <  SRR4302541.8621268/94‑1 (MQ=60)
                                                      CGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATA                                         <  SRR4302541.4459521/94‑1 (MQ=60)
                                                       GTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATAT                                        >  SRR4302541.690137/1‑94 (MQ=60)
                                                        TACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATT                                       <  SRR4302541.5751820/94‑1 (MQ=60)
                                                        TACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATT                                       >  SRR4302541.8335497/1‑94 (MQ=60)
                                                        TACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATT                                       <  SRR4302541.180164/94‑1 (MQ=60)
                                                        TACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGAGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATT                                       <  SRR4302541.5843998/94‑1 (MQ=60)
                                                         ACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTA                                      <  SRR4302541.7726175/94‑1 (MQ=60)
                                                         ACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTA                                      <  SRR4302541.5344443/94‑1 (MQ=60)
                                                         ACCGGAGCGGAAGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTA                                      <  SRR4302541.5344442/94‑1 (MQ=60)
                                                          CCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTAT                                     <  SRR4302541.2339100/94‑1 (MQ=60)
                                                          CCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTAT                                     <  SRR4302541.4928816/94‑1 (MQ=60)
                                                           CGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATC                                    >  SRR4302541.5320359/1‑94 (MQ=60)
                                                           CGGAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATC                                    >  SRR4302541.6706106/1‑94 (MQ=60)
                                                             GAGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAA                                  >  SRR4302541.8197927/1‑94 (MQ=60)
                                                              AGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAG                                 >  SRR4302541.4414541/1‑94 (MQ=60)
                                                              AGCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAG                                 <  SRR4302541.2697959/94‑1 (MQ=60)
                                                               GCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGC                                <  SRR4302541.4329893/94‑1 (MQ=60)
                                                               GCGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGC                                <  SRR4302541.4182290/94‑1 (MQ=60)
                                                                CGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCT                               >  SRR4302541.8698340/1‑94 (MQ=60)
                                                                CGGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCT                               <  SRR4302541.742617/94‑1 (MQ=60)
                                                                 GGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTG                              <  SRR4302541.3353696/94‑1 (MQ=60)
                                                                 GGATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTG                              <  SRR4302541.6708736/94‑1 (MQ=60)
                                                                  GATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGAGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGT                             >  SRR4302541.3289770/1‑94 (MQ=60)
                                                                   ATGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGAT                            <  SRR4302541.7219764/94‑1 (MQ=60)
                                                                    TGGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATC                           <  SRR4302541.6453881/94‑1 (MQ=60)
                                                                     GGCATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCA                          <  SRR4302541.3626023/94‑1 (MQ=60)
                                                                       CATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCGAG                        >  SRR4302541.7203459/1‑94 (MQ=60)
                                                                       CATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCGAG                        >  SRR4302541.7203460/1‑94 (MQ=60)
                                                                       CATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAG                        <  SRR4302541.7944250/94‑1 (MQ=60)
                                                                       CATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAG                        >  SRR4302541.2336493/1‑94 (MQ=60)
                                                                        ATAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGC                       >  SRR4302541.1636000/1‑94 (MQ=60)
                                                                         TAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCT                      <  SRR4302541.4208024/94‑1 (MQ=60)
                                                                         TAAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCT                      <  SRR4302541.2647283/94‑1 (MQ=60)
                                                                          AAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTC                     >  SRR4302541.5195292/1‑94 (MQ=60)
                                                                          AAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTC                     >  SRR4302541.8053035/1‑94 (MQ=60)
                                                                          AAAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTC                     >  SRR4302541.5917805/1‑94 (MQ=60)
                                                                           AAGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCA                    <  SRR4302541.1515255/94‑1 (MQ=60)
                                                                            AGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCAT                   <  SRR4302541.4633137/94‑1 (MQ=60)
                                                                            AGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCAT                   <  SRR4302541.3324513/94‑1 (MQ=60)
                                                                            AGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCAT                   <  SRR4302541.4633136/94‑1 (MQ=60)
                                                                            AGCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCAT                   <  SRR4302541.6358566/94‑1 (MQ=60)
                                                                             GCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATG                  <  SRR4302541.5398306/94‑1 (MQ=60)
                                                                             GCGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATG                  >  SRR4302541.5437693/1‑94 (MQ=60)
                                                                              CGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGT                 >  SRR4302541.4699808/1‑94 (MQ=60)
                                                                              CGATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGT                 >  SRR4302541.525282/1‑94 (MQ=60)
                                                                               GATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTT                <  SRR4302541.1270010/94‑1 (MQ=60)
                                                                               GATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTT                <  SRR4302541.4422590/94‑1 (MQ=60)
                                                                               GATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTT                >  SRR4302541.4395652/1‑94 (MQ=60)
                                                                               GATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTT                >  SRR4302541.532222/1‑94 (MQ=60)
                                                                                ATTTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTC               >  SRR4302541.467671/1‑94 (MQ=60)
                                                                                  TTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCGAGCTCATGTTCGT             >  SRR4302541.5636224/1‑94 (MQ=60)
                                                                                  TTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGT             <  SRR4302541.3548641/94‑1 (MQ=60)
                                                                                  TTAAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGT             <  SRR4302541.3033028/94‑1 (MQ=60)
                                                                                    AAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTG           >  SRR4302541.5909124/1‑94 (MQ=60)
                                                                                    AAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTG           >  SRR4302541.1269512/1‑94 (MQ=60)
                                                                                    AAGTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTG           >  SRR4302541.1269513/1‑94 (MQ=60)
                                                                                      GTTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAG         <  SRR4302541.6876872/94‑1 (MQ=60)
                                                                                      GTTAATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGATCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAG         >  SRR4302541.1547489/1‑94 (MQ=60)
                                                                                       TTCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGT        <  SRR4302541.750036/94‑1 (MQ=60)
                                                                                        TCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTG       >  SRR4302541.3230625/1‑94 (MQ=60)
                                                                                        TCATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTG       <  SRR4302541.7014870/94‑1 (MQ=60)
                                                                                         CATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGT      <  SRR4302541.4794317/94‑1 (MQ=60)
                                                                                         CATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGT      <  SRR4302541.4926488/94‑1 (MQ=60)
                                                                                         CATCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGT      >  SRR4302541.6683375/1‑94 (MQ=60)
                                                                                           TCGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGA    >  SRR4302541.2119589/1‑94 (MQ=60)
                                                                                            CGCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAA   >  SRR4302541.7938745/1‑94 (MQ=60)
                                                                                             GCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAAC  >  SRR4302541.17893/1‑94 (MQ=60)
                                                                                             GCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAAC  <  SRR4302541.8245065/94‑1 (MQ=60)
                                                                                             |                                                                                             
ATGGAAACCAGTGATTTGCTCGTCGCCTTGCTCAGTGATGGTATAACTTTTAATCGTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAAC  >  NC_000913/1397272‑1397458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑