Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F2 I0 R1
|
193 |
6708.0 |
8620653 |
98.5% |
8491343 |
136.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,394,291 |
C→G |
19.9% |
E114Q (GAA→CAA) |
chuS ← |
hematinate‑forming heme oxygenase ChuS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,394,291 | 0 | C | G | 19.9%
| 386.8
/ 30.1
| 198 | E114Q (GAA→CAA) | chuS | hematinate‑forming heme oxygenase ChuS |
| Reads supporting (aligned to +/- strand): ref base C (50/91); new base G (33/3); total (104/94) |
| Fisher's exact test for biased strand distribution p-value = 5.53e-10 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 198 total aligned reads displayed.
ATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394157‑2394423
|
aTCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGa > 2:990547/1‑140 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTCTTTTAt > 2:662140/1‑140 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGGTTTTTTTgtt > 3:666985/1‑138 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAt > 3:545652/1‑140 (MQ=255)
tGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTAGTTTAtgttg > 5:231995/1‑138 (MQ=255)
taTAAACCGTGCCAGAAGCGCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑a < 5:271152/139‑1 (MQ=255)
gATAATCCGTGCCAGACGCTCACTCCTTGACGCCATATAGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCATGATGATCAAAGAACTGAATACTCTGGCGTTAGCCACGAGCCGTGTTATCTTTGATGTGG‑a < 5:182752/140‑1 (MQ=255)
gATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑a < 7:904915/140‑1 (MQ=255)
gATAAACCGTGCCAGAAGCTCACTCCATGCCCCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑a < 4:832033/140‑1 (MQ=255)
aaCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAac > 1:869226/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAATGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTTG‑GTAACACCgg > 5:544195/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGGTTTCTTTGTTGTGG‑TAAACACTgg > 1:107424/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGTTGTTG‑TAAacacaag > 3:566030/1‑137 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATTTGG‑AAAAAACAgg > 1:818459/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTATTTGG‑aaaaaaattg > 1:991196/1‑134 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTgg > 2:453000/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGTTGTGG‑AAAACACAgg > 5:164357/1‑140 (MQ=255)
aaGCTCACTCCATGCCTGAATATCTTTATTGTCGTTTGCATAAACTTTTAGTATTGGATTGCCCTTATGTTCAAAGAAGTGAATACTCTGGCGTTCGACACGATACGTGTTTTCTTTGATGTGG‑AAAACAATGGCACatt < 7:401228/140‑1 (MQ=255)
gCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCattga < 2:734385/140‑1 (MQ=255)
gCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTGCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCattga < 4:1013972/140‑1 (MQ=255)
cccTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAATGAACTGAATACTCTGGCGTTCGCCACGAGCCGAGGGTTCTTTGATGGGG‑AAAACACTGGCCCctttattg > 1:1067126/3‑140 (MQ=255)
cACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCattgattg < 8:655414/140‑1 (MQ=255)
cACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATAATCTGGCGTTCGCCACGAGCCGTGTTTTATTTTTTGTGG‑AAAAAACTGGACCctttattt > 7:17647/1‑139 (MQ=255)
cACTCCATGCCGCCATATCGGTATTGTAGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGCACTGAATACTCTGGCTGTCGCCCCGAGCCGTGTGTTCGTTGATGTGG‑AAATCACAGGGGCattgtttt > 7:317673/1‑139 (MQ=255)
cACTACATGCGGCATTTTCGGTATTGTCGGTGGCATAAACTTTTAGTAATTCATCGCCATGATGATCAAAGAACTGAATACTCTGGAGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCattgattg < 6:781047/140‑1 (MQ=255)
ttccgccATATCGGTATTGTCGGTCGCTTAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGTACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACa < 5:373147/138‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACa < 5:728910/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGG‑AAAACACAAGCCCAGTGGATGATAAAcc > 3:812590/1‑139 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGAATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACa < 1:178381/140‑1 (MQ=255)
tGCCGCCATATAGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGCATACTCTGGCGTTCCCCACGAGCCGTGGTTTCTTTGAAGAGG‑AAACCACAGGACCAGTGATTTATAAAcc > 6:556660/1‑139 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTAATTGATGTGG‑AAAACAATGGCCCAATGATTGAGAAAAAGAAGTa > 4:453379/1‑140 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTTATGTGGTAAAAAAGTGCCCAATTG‑TTGAGGAACAGACGTa > 3:439789/1‑140 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGG‑AAAACCCTGGCCCATTGATTGAGTAACAGACgga > 4:470943/1‑138 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCAGCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATGTGATGTGG‑TTAACCCTGGGACATTGATTGTGGAACAGTCGTa > 6:815418/1‑140 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATAGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTAATTGATGTGG‑AAAAAACTTGCCCAATTATTGAGAAACAAACCTAAATACAccgcgcc > 6:126984/1‑139 (MQ=255)
ggggTGGCATAAACTTTTATTAATGCATCGACCGGATGATCAAAGAACTGAATACTCTGGCGGTCGCAACGAGCCGTGTTTTGTTTGATGTGT‑AAAAAACTGGCCCATTTATTGAGAAACAGACGTAAATCCAgcgcgcg < 7:830346/138‑1 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGcgcgcgcg < 1:115869/140‑1 (MQ=255)
gTGGCATAAACTTTTAGTAATGCATCGGCCTGATGTTAAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACAGTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCgg < 1:3001/140‑1 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGACCTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGGTTGATGTGG‑GACACACAGGCCCCGTGATTTTGTAACACACCTGAATCCAGCGCGCGCggct > 2:775111/1‑138 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAt < 8:175452/84‑1 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGG‑TAAACACTGGCCCAATGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAt > 6:339834/1‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGGTTTATTTGG‑AAAACACTGGGCCAATGATTTTGAAACCGCACTATATACAGCGCGCGCGGAt > 7:254709/1‑140 (MQ=255)
tttAGTAATGCATCGCCCTTATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCaa < 6:326624/140‑1 (MQ=255)
tttAGTAATGCATCGCCCTGATGAACAAAGAACTGACAACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTATGTGG‑AAAACACTGGCCCATTGAGTGAGATACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCaa < 7:599290/140‑1 (MQ=255)
ttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAAAACGGGCCCAATGATTGAGAAACAGACGTAAATCCAGCGCGCCCCGAATGAGGAtgact > 2:716176/1‑136 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCCATGGTTGGGCAAAAGACCTAAATACAGCCCGCCCGGCTTGAGGATCAATACCGCaa > 7:761324/1‑139 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGG‑AAAACACTGGCCCCTTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCAt > 4:118403/1‑140 (MQ=255)
gCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGTTGTTG‑AAAACACTGGCCCATTGATTGTGAAACAGACGTAAATCAACCGCGCGCGGCTTGAGGATCAATCCGGCAtt > 7:539743/1‑139 (MQ=255)
gCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATTTGG‑TAAACAAAGGCCCCTTGATTGTGGAACAGACGGAAATACAGCGCCCGCCGCTTTAGGATAAATCCGGCAtt > 3:374647/1‑139 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGt < 1:528914/140‑1 (MQ=255)
aTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTc < 6:1004621/140‑1 (MQ=255)
gCCCTGATGATCAAAGAACTGAATACTCTGGCGATCGCCACGAGCCGTGTTTTCTTTGATGTTG‑AAAAATCTGGCCCATTGATTGAGACACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCACTCCGGCATGTCCGt < 3:413404/140‑1 (MQ=255)
ccccTTATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGAGTTGTTTGATTTGG‑AAAACAATGTCCCAATGATTTAGAAACAGACGTAAATCCAGCGCGCGCTTATTGAGGATCATTCCGGCATGTGCGt < 2:334398/139‑1 (MQ=255)
cccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGG‑AAAACACAGGCCCCTTGATTGAGAAACAGAAGTAAATAAAACGCCCGCCGGATGAGGATAAAAACCGCATGTCCGtt > 8:417363/1‑140 (MQ=255)
cccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGTTGTGG‑TAAACACTGGCCCAGTGATTGAGAAAAAGACGTAAATCAAGCGCGCGCGGCTTGAGGGTCAAAACGGCATGTCCGtt > 4:1056460/1‑140 (MQ=255)
ccTTATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGATACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTc < 3:332032/140‑1 (MQ=255)
ccTGATGATCAAAGAACTGAATACTCTGGCGGTCGCCACGAGCCGTGGTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAGTGAGGATCAATCCGGCATGGCCGTTc < 2:594274/140‑1 (MQ=255)
gatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCTATCCGGCATGTCCGTTCAAATGc < 5:330999/140‑1 (MQ=255)
atCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCTTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCAGGCATGTCCGTTCAAATGCt < 3:489523/140‑1 (MQ=255)
cAAATAACTGAATACTCTGGCGTTCTCCACGCGCCGTGTTTTGTTTTTTGTGG‑AAAACACTGGCCCATTGTTTGTGAAACATAAGTTAATCCCGAGCGCGCGGTGTGATTATAAATGCCGCATGTCCGTGGAAATGTTgt > 8:585063/1‑139 (MQ=255)
cAAAGATCTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGTTGTGG‑AAAAAACGGGGCCCTTGTTTGAGAAACAGACTTAAATCCAGCCCCCGCGGATTGAGGAGAAATACGGCAAGTCCGTTCAAATggggg > 8:102444/1‑136 (MQ=255)
aaCTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTTATGTGG‑AAAAAACTGGCCCAATGAATGAGAAACAGACGGAAATACACCGCCCGCGGGATGAGGATCAAGAAGGCAAGTCCCTTCAAATGCTGGTTtgt > 1:449829/1‑140 (MQ=255)
cTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGGGG‑TTAACACTGGGCCAATGTTTGAGAAAAAGCCGTAAATGCAGCGCGCCCGGAGGGCGGATCAATCCCGGATGTCCGGTCAAAATCTGGGTtgtgt > 6:7581/1‑139 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTATGTGG‑AAAACACTGGGCCATTGAATTAGAAACAGACGTAAATCCAGCGCGCGCGGAATGAGGATCAAAACGCCATTTCCGGTAAACTGCTGGGTTGTGAAcc > 2:804488/1‑139 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGG‑GAAACACGGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGGTAAATCCGGCATGTCCGTTCAAATTCTGGGTTGTGTACg > 6:691894/1‑140 (MQ=255)
tACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGAGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCa < 7:195528/140‑1 (MQ=255)
tctGGCGTTCGCCACGAGCCGTGTTTTGTTTGTTGTTG‑TAAACCCTGGCCCAGTTATTGTGTAACAGACGGAAATGCAGCGCGCGCGGGTTGAGGATCCAACCGGCCTGGCCGTTCAAAAGCTGGTTTGTGGACggcccc > 6:719017/1‑135 (MQ=255)
tctGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGAGCAATCCGGCATGTCCGTTCAAATGCTGGTTTGGGAACGCACCa > 4:613554/1‑140 (MQ=255)
ctGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 5:482718/140‑1 (MQ=255)
ctGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 7:116184/140‑1 (MQ=255)
ctGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 3:127059/140‑1 (MQ=255)
ctGGCGGTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 4:713194/140‑1 (MQ=255)
tGGCGTTCGCCACGATCCGTGTTTTCTGTGATGTGG‑AAACCACTGGACCCGTGGTTGAGCAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCCTGGCCGTTCAAAGGCTGGTGTGTGCACGCTCCCAc > 2:628266/1‑140 (MQ=255)
tGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGG‑AAAACACTGGCCCAGTGATTTTGGAACAGCAGTAAATCCATCGCGCGCGGATTTAGGATCAATCCGGCATGTACGGTCAAATTATGGTTTTTGAAATCACCaaa > 4:85482/1‑139 (MQ=255)
tGGCGTTCGCCACGAGCCGTGGTTTGTTTTATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGCTTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGGACGCACCAAc > 2:347219/1‑140 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGCTGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 4:590593/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCGATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAGTGAGGATCAATCCGGCATGTCCGTTCAAATGCGGGTTTGTGATCGCACCAACt < 2:526587/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGTCGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAACTGCTGGTTTGTGAACGCACCAACt < 4:207632/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 7:425121/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 4:374647/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 2:818459/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 5:661628/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 1:257473/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 8:360814/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTAGATTTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTTGTTTGTGAACGCACCAACt < 8:67224/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTGTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGCTTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 7:682266/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGGGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 6:931563/140‑1 (MQ=255)
cGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCa < 2:869226/140‑1 (MQ=255)
cGCCACGAGCCGTGGTTTCTTTGATGTGG‑TAAACACGGGCCCCGTGATTGAGAAACAGACGTTAATCCAGCGCGCGCGGATTGTGGGTCAATCCGGCATGTCCGGTAAAATGCTGGTTTGTGAACGCACCAACTTGttaa > 2:1119210/1‑138 (MQ=255)
cACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACATACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATgg < 8:810573/140‑1 (MQ=255)
cACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATgg < 4:808719/140‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 7:441292/140‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 6:169024/140‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 1:396849/140‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 3:781472/140‑1 (MQ=255)
gCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAATCAGACGTAAATGCCGCGCGCGCGGATTGAGGGTGAATCCGGCATGTCCGTTCAAATGGTGGTTTGTGATCGCACCAACGTGTTCATGGTCTGc > 6:632082/1‑140 (MQ=255)
gtgtTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTa < 8:374636/140‑1 (MQ=255)
gtgtTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTa < 1:488318/140‑1 (MQ=255)
gtgtTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAAACCAGCGCCCGCGGATTGCGGATCAATCCGGCAAGTCCGGTCAAATGCTGGTTTTTGAACGCACCAACATGTTCATGGAcgtcgtg > 4:992423/1‑134 (MQ=255)
gtgtTTTCTTTGATGTGG‑AAAACACAGGCCCATTTATTGAGAAACACACGTAAATACACCGCGCGCGGATTGAGGATCAAAACGGCAAGTCCGTTCAAATGATGGTTTGTGAACCAACCAACATGTTCAATGACAGCGTa > 8:915676/1‑140 (MQ=255)
|
ATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGG‑AAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394157‑2394423
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
