Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F2 I0 R1
|
193 |
6708.0 |
8620653 |
98.5% |
8491343 |
136.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,951,512 |
G→T |
9.8% |
D36Y (GAT→TAT) |
topA → |
type I DNA topoisomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,951,512 | 0 | G | T | 9.8%
| 387.9
/ 2.7
| 169 | D36Y (GAT→TAT) | topA | type I DNA topoisomerase |
| Reads supporting (aligned to +/- strand): ref base G (98/44); new base T (2/24); total (101/68) |
| Fisher's exact test for biased strand distribution p-value = 3.32e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 177 total aligned reads displayed.
TCCTGGAAGAATCAAATTAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGC > NZ_CP022686/4951376‑4951650
|
gaagaaTCAAATTAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCg < 5:552534/140‑1 (MQ=255)
gaagaaTCAAATTAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCg < 5:996305/140‑1 (MQ=255)
gaaTCAAATTATGTAAGGTGAATATGGGTAAATCTCTTGTAATCGTTGAGTCACCGGCAAAAGCCAATACGATCAACAAGGATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGAcc < 8:79800/140‑1 (MQ=255)
gaaTCAAATTAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGAcc < 8:519387/140‑1 (MQ=255)
aTCAAATTAGGTATGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCACCAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAg > 3:790460/1‑140 (MQ=255)
aTCAAATTAGGTAAGGTTAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGCTCAACAAGTATCAGGGTAGTGACTACGTGGTGAAATCCACCGACGGACACATCCGAGATATGCCGACCaa > 3:1086770/1‑139 (MQ=255)
aTCAAATTAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAg > 2:895194/1‑140 (MQ=255)
aTCAAATTAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAg > 7:455829/1‑140 (MQ=255)
aTCAAATTAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAg < 3:82259/140‑1 (MQ=255)
aTCAAATTAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAg > 7:370644/1‑140 (MQ=255)
aTCAAATTAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAg > 1:531636/1‑140 (MQ=255)
ttAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCCTTGATGCCCAGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACTTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTc < 6:826593/140‑1 (MQ=255)
aGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCaa < 4:399649/140‑1 (MQ=255)
aGGTAAGGAGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGTCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGTTTAGCCGACCAGTGGCTCaa < 2:519424/140‑1 (MQ=255)
ggTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCacc > 7:310640/1‑138 (MQ=255)
tatGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGCTCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCaa > 4:1009079/1‑128 (MQ=255)
tatGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCaa < 3:1009080/128‑1 (MQ=255)
tatGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAaga > 8:66637/1‑140 (MQ=255)
ggTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGc > 7:520380/1‑140 (MQ=255)
gTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGcc > 3:561948/1‑140 (MQ=255)
aaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGCCCAGTGGCTCCACTGCCAAAAAGAGTGCCGAc > 3:449329/1‑140 (MQ=255)
aaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGAc > 8:911873/1‑140 (MQ=255)
aaGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGAc > 2:318708/1‑140 (MQ=255)
ttgtatgcGTTGAGTCCCGGGAAAAGGAAAAAACGATAAACAATTATTTGGGTCGTCTCTAGGTTGTTAAAGCCTGGGTCGGTAACATCCGGTTTTTGCCGCCTATTGGCTCAAGTGCAAAAAAGAGTGCCGACTCTAcc < 4:1086769/133‑1 (MQ=255)
ttGTCTTCGTTTTGTCCCGGGCAAATCCCAAAACGATCAACAAGTATCTGGGTTGTGAGTCGGTGGGGTAATCCCGCGTGGGTCTCAGCCGCGTTTTGCCGCCCTGTGGCTCAACGCCCAAACCGAGTCCCGACTCTAcc < 8:376039/140‑1 (MQ=255)
ttGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGATTCTAcc > 6:245997/1‑140 (MQ=255)
ttGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTAcc > 4:727920/1‑140 (MQ=255)
ttGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATACAGCGTCGGTCACATCCGCGATTTGCAGACAAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTAcc > 7:675017/1‑140 (MQ=255)
ttGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGAACAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGCCCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTAcc > 5:221743/1‑140 (MQ=255)
tGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCt > 2:644417/1‑140 (MQ=255)
aTCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTAAACTGCCAAAAAGAGTGCCGACTCTACCTccac > 5:298335/1‑140 (MQ=255)
cGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGTGTAGGGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCTATTTGCCGACAAGTGGCTAAACTGACAAAAAGAGTGCCGACTCTACCTccacca > 8:261500/1‑140 (MQ=255)
cGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGAcc > 5:731905/1‑97 (MQ=255)
cGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGAcc < 6:731905/97‑1 (MQ=255)
cGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTccacca > 2:182834/1‑140 (MQ=255)
tGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGa > 5:624279/1‑140 (MQ=255)
tGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGa > 1:241020/1‑140 (MQ=255)
aGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGAcc > 7:724325/1‑139 (MQ=255)
aGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACg > 2:46705/1‑140 (MQ=255)
gTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACgg > 1:957077/1‑140 (MQ=255)
ggCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTaaaa > 1:725845/1‑140 (MQ=255)
aaGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCt > 3:131700/1‑140 (MQ=255)
aGCAAAATCGAACAACAATTAGGTGGGTCGTTACTAGGTGGTTAATGCCAGGGGCGGTCACAGCCGCGTTTTGCCGACCTGTGGCTCAACTGCAAAAAATAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTa < 1:299052/140‑1 (MQ=255)
ccAAAACTATCAAAAATTATCTGGGTAGTGACTACGTGGTTAAATCCAGCGTGGGTCACATCCGCTATTTGCCGACAAGGGGCTCAACTGCAAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTaaa < 6:663364/140‑1 (MQ=255)
caaaaaCTATAAAAAAGTATCTGTTTATTGAATCCGTGGTCAAAACCAGCGTCGGTAAATTCCGCGATTTGCCGACCTGTGGCTCAACTGCAAAAAAGTGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTaaa < 1:344897/138‑1 (MQ=255)
tCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCATAAAAAGGATGaa > 8:491310/1‑140 (MQ=255)
aacaaGTATTTGGGTAGTGACTACGTGGTGAAATCCTGCGTCGGTCACATCCGCTATTTGCCGACCAGTGGCTCAACTGCAAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACg < 8:303718/140‑1 (MQ=255)
ttATCTGGGTAGTGACTCCGTGGTTAAATCCCGCGGCGGTCACATCCGCGATTTGCCGCCCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGgcg < 2:709196/139‑1 (MQ=255)
taaTCTGGGCAGGTACTCCGTGGTTAAATCCAGCGGCGGACACATCCGCGATTTGCCGACCAGTGGCTCACCTGCCAAAAACATTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGgcg < 8:10197/138‑1 (MQ=255)
gTATCTGGGTAGTGAATCCGTGGTCAAACCCAGCGGCGGCCCCAGCCGGGATTTCCCCACCAGTGGCGCAACTGCCAAAAAGAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGgcg < 5:409561/140‑1 (MQ=255)
tGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCtctc > 3:974362/1‑140 (MQ=255)
ggtttttaCTAGGGGGTTAACTCCTGCGTCGGACAAATCGGCTATTTGCCGACCAGTGGCTCAAGTGCCAAATTGTGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGt < 2:1121391/133‑1 (MQ=255)
ggTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGCCTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGt > 3:705954/1‑140 (MQ=255)
gttgTGACTCGGGGGTGAAATCCTGCGGCGGTCAAATCCGCGATTTGCCTACCAGTGGCTCAACTCCAAAAAACCGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 2:801352/137‑1 (MQ=255)
gTAGTGACTACGTGGTTAAATCCTGCGGCGTCAACAGCCGCTATTTCCCCACCTGTGGCTCAAGTGCCAAAACGCGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 1:1099195/140‑1 (MQ=255)
gTAGTCACTAGGTGGTGAAATCCAGCGGCGGACACATCCGCTATTTGCCGACCAGGGGCTCAACTGCCAAAAAGAGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTc < 3:575193/140‑1 (MQ=255)
tgttaCTCCGTGGTTAAATCCCGCGTGGGTCACATCCGCTATTTGCCGACCTGTGGCTCAACTGCAAAAAAGAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCaa < 3:768322/136‑1 (MQ=255)
tgTGACTCCGTGGTGAAATCCCGCGGGGTTCACTGCCGCTATTTGCCGACCAGGGGCTAAACTGCAAAAATGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCaa < 1:1014483/139‑1 (MQ=255)
tgTGAATACGTGGTGAAATCCAGCTTCGGTCACACCCGCTATTTGCCTACCAGGGCCTCAACTGCCAAAAAGAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCaa < 4:1067392/139‑1 (MQ=255)
gTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 7:20181/1‑140 (MQ=255)
gTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 2:698652/1‑140 (MQ=255)
gTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 7:366609/1‑140 (MQ=255)
gTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAc > 7:116027/1‑140 (MQ=255)
tGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAcc > 2:1102986/1‑140 (MQ=255)
tGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAcc > 6:557580/1‑140 (MQ=255)
tGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAcc > 4:128891/1‑140 (MQ=255)
tGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAAcc > 1:602747/1‑140 (MQ=255)
aCTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGt > 7:220813/1‑140 (MQ=255)
taggtgttgAAAGCCCGCGTCGGCCACATCGGCGATTGGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTAt < 4:561705/137‑1 (MQ=255)
taggtggttAAAGCCAGGGTCGGGCACATCCGCGTTTTGCCTACCAGTGGCCCAACTGCAAAAAAGAGCGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTAt < 5:448789/137‑1 (MQ=255)
accggggttAAATCCAGCGTCGGACACCTCGGCTATTTGCCTACCAGTGGCTCAACTGCAAAAAAGAGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTAt < 2:20349/135‑1 (MQ=255)
accGTGGTGAAAACCAGCGGCGGTCACATCCGCTTTTTCCCTACCTGTGGCTCACCTGCCAAAAAGAGCGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTAt < 4:1052640/138‑1 (MQ=255)
aaCGTGGTGAAACCCCGCGTCGGTCACATCCGCGTTTGGCCGACCCGGGTCTAACCTGCCAAACACCGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTAt < 1:784127/139‑1 (MQ=255)
aCGTGGTTAAAACCAGCGTCGGTCAAATCCGCTATTTGCAGACCAGTGGCAAAACTGCCAAAAACACTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATg < 3:859082/140‑1 (MQ=255)
aCGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGCCCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAATGATGAACGTGGCGCTCTCGTCAACCGTATg > 2:242312/1‑140 (MQ=255)
aCGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGCCCAGTGGCTCAACTGCCAAAAAGAGTGACGACTCTACCTCCACCAAGACTGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGGATg > 6:405854/1‑140 (MQ=255)
aCGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGGCGACTCTTCCTCCACCAATACGGCTAAAAAGCCTAAAAAGGATGCACGTTGCGCGCTCGTCATCCGTATg > 2:555899/1‑140 (MQ=255)
aCGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATg > 6:576886/1‑140 (MQ=255)
cGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGCCCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCGAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATgg > 6:779214/1‑140 (MQ=255)
gtcaaaCCCAGCGCCGGCCACATCCGCGATTTGCCGACCAGGGGCCCAACTGCCAAAACGAGGGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGt < 1:536231/137‑1 (MQ=255)
gAAATCCAGCGTCGGTCACATCCGCGATTTGCCGCCCAGTCGCTCATCTGCCAAAAAGAGTGCCCACTCTACCTCCACCAAGACGGCAAAAAAGCCAAAAAAGGATGCACGAGGCGCACTCCTCCACCGTATGGGGGTTg > 4:776450/1‑140 (MQ=255)
aaTCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGCCTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGAc > 5:185060/1‑140 (MQ=255)
cctggggcGGTCAAATCCGCGATTTGCCGACCTGTGGCTCCACAGCCAAAATCTGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCg < 5:223832/133‑1 (MQ=255)
ccAGCGGCGGTCCCACCCGCGATTTGCCGACCAGGGGCTCAACTGCCAAAAAGCGTCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCg < 5:279706/140‑1 (MQ=255)
gcttCGGTCACATCCCTTTTTTGCGGACATGGGTCTAAACTCAAAAAAAGAGCGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTATCGTCAACCGTATGGGGGTTGACCCGTgg < 6:147522/137‑1 (MQ=255)
gCGTCGTCCACATCCGCTTTTTGCCGACCAGGGGCTCAACTGCAAAAAACAGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTgg < 7:717863/140‑1 (MQ=255)
gCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTAAACCGTATGGGGGTTGCCCCGTgg > 4:365806/1‑140 (MQ=255)
gCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTAACTCCACCAAGACGGCTAAAAAGACTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGCCCCGTgg > 6:778470/1‑140 (MQ=255)
gCGTCGGCAACACCCGCGATTTCCCCACCAGGGGCTCACCTTCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTgg < 5:1053148/140‑1 (MQ=255)
cGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGc > 3:1073041/1‑140 (MQ=255)
gTCGGACACATCCGCTATTTCCCGCCCAGGGGCTCAACTCCCAAAAAGAGGCCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGca < 6:365011/140‑1 (MQ=255)
tCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAATAAGAGTGCCGCCTCTACCTCCACCAAGACCGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGGGGCCCCGGGGcac > 7:777289/1‑140 (MQ=255)
tCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGcac > 5:844762/1‑140 (MQ=255)
ggTCCCATCCGCTATTTCCCCACCAGCGCCCCAAACGCAAAAACGACTCCCGACTCTACCTCCCCCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACaa < 5:694338/140‑1 (MQ=255)
gTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAAt > 7:223120/1‑140 (MQ=255)
tCACATCCGCTATTTGCCGACCAGGGGCTAAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAAtt < 3:355421/140‑1 (MQ=255)
cgcgATTTGCCGACAAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGgc < 4:891184/140‑1 (MQ=255)
cgcgATTTGCCCCCCAGGGGCGCAACGGCCAAAAAGCGGGTCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGgc < 7:332829/140‑1 (MQ=255)
gcgTTTTGCCGCCCAGGGGCCAAACGCCCAAACCGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGgcg < 7:541229/140‑1 (MQ=255)
cgATTAGCGGACCTGTGGCTAAACTGCAAAAACGTTTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGTGTTGACCCGTGGCACAATTGGGAGgcgc < 6:443248/140‑1 (MQ=255)
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TCCTGGAAGAATCAAATTAGGTAAGGTGAATATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAACTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGC > NZ_CP022686/4951376‑4951650
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
