Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F13 I0 R1
|
150 |
9496.0 |
7621532 |
98.4% |
7499587 |
136.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,509,248 |
T→G |
47.6% |
L572R (CTG→CGG) |
dnaK → |
molecular chaperone DnaK |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,509,248 | 0 | T | G | 47.6%
| 7.3
/ 162.5
| 141 | L572R (CTG→CGG) | dnaK | molecular chaperone DnaK |
| Reads supporting (aligned to +/- strand): ref base T (40/34); new base G (33/34); total (73/68) |
| Fisher's exact test for biased strand distribution p-value = 6.15e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.56e-01 |
Only 100 of 142 total aligned reads displayed.
GACCGTAAGTTTGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGCTTCTG > NZ_CP022686/3509109‑3509385
|
gACCGTATGTTTGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACt < 1:91020/140‑1 (MQ=255)
aCCGTAAGTTTGAAGAGCTGGTACAGACTAGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTg > 7:455801/1‑140 (MQ=255)
aGTTTGAAGAGCTGGTCCAGACGCGCAACCTGGGCTACCTTCTGATGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCAGAGCTGACTGCACGGGAAACt < 4:762964/140‑1 (MQ=255)
gTTTGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTg > 2:881041/1‑140 (MQ=255)
tGAAGAGCTGGTACAGACTCGCAACCATTGCGCCCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAATCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGACTGCGCTGACTGCACGGGAAACTGcaa > 3:867681/1‑138 (MQ=255)
tGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGctc > 3:867679/1‑140 (MQ=255)
aaGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTg > 3:205857/1‑140 (MQ=255)
agagCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGa < 1:807944/140‑1 (MQ=255)
cTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAgg > 8:256449/1‑140 (MQ=255)
cTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGATACTGCTCTGAAAgg > 8:638120/1‑140 (MQ=255)
cTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAgg > 5:888591/1‑140 (MQ=255)
tGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGt < 3:467464/140‑1 (MQ=255)
tGGGACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGt < 6:360070/140‑1 (MQ=255)
gACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACa > 6:413860/1‑140 (MQ=255)
gACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACa > 6:681299/1‑140 (MQ=255)
aCTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACaa > 1:13874/1‑140 (MQ=255)
aCTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACaa > 6:19800/1‑140 (MQ=255)
tCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACt < 7:34391/118‑1 (MQ=255)
cGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAATAAGGTTGAAGAAGCAGGCGACAAACTGCAGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGc < 4:527300/140‑1 (MQ=255)
gCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGCCTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGcc > 2:986628/1‑140 (MQ=255)
gCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGcc > 3:98509/1‑140 (MQ=255)
gCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGcc > 7:697752/1‑140 (MQ=255)
gCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGcc > 1:553939/1‑140 (MQ=255)
cAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCg > 2:168626/1‑140 (MQ=255)
ggggACCATCTGCTGCACAGCACCCCTAAGCAGGGTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGa < 6:526518/137‑1 (MQ=255)
ggCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGa > 2:588318/1‑140 (MQ=255)
cATCTGCATCACAGCACCCGAAAGCATGTTCAAGCAGCAGGCGACAATCTGACGGATGACGACAAAACTGCTAACGAGTCTGAGCTGACTGCACTGTAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTTTCGAAGCGaa < 4:584628/140‑1 (MQ=255)
tgctgcACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGACCTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGCAGCGAAAATg > 2:425761/1‑140 (MQ=255)
ctgcACAGCACCCGTAAGCAGGTTGAAGACGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCa < 1:704766/140‑1 (MQ=255)
ctgcACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCa < 4:321025/140‑1 (MQ=255)
ctgcACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCa < 6:538574/140‑1 (MQ=255)
ctgcACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGAAGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCa < 5:184394/140‑1 (MQ=255)
cacaGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGa > 6:286994/1‑140 (MQ=255)
cacaGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGa > 4:149839/1‑140 (MQ=255)
acaGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGaa < 5:765284/140‑1 (MQ=255)
acaGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGaa < 4:325160/140‑1 (MQ=255)
acaGCACCCGTAAGCAGGTTGAAGAAGCAGGAGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGaa < 7:538477/140‑1 (MQ=255)
caGCACCCGTTAGCAGGTAGAAGAAGAAGGCGACAATCTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGTCTGCACGGGAAACTGCTCTGAAAGGAGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAAc < 8:602441/140‑1 (MQ=255)
caGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAAc < 8:602443/140‑1 (MQ=255)
cccccGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTgg > 4:708877/3‑140 (MQ=255)
cACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTgg > 3:496903/1‑140 (MQ=255)
cACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTgg > 6:113860/1‑140 (MQ=255)
cACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTgg > 2:976001/1‑140 (MQ=255)
cACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTgg > 7:155025/1‑140 (MQ=255)
cACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTgg > 8:364741/1‑140 (MQ=255)
aCCCGTAAGCCGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGc < 6:214588/140‑1 (MQ=255)
ccGGAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATAGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGcac < 2:559918/140‑1 (MQ=255)
cGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGcaca < 7:408321/140‑1 (MQ=255)
gTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCGATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAg > 8:148684/1‑140 (MQ=255)
gTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGATGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCAGCTATCGAAGCGAAAATGCAGGAACTGGcacat > 2:702932/1‑139 (MQ=255)
tAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAgg < 3:202009/140‑1 (MQ=255)
aGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGtt > 3:918348/1‑140 (MQ=255)
gCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGttt < 1:467427/140‑1 (MQ=255)
cAGGTTGAAGAAGCAGGCGGCAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGCCTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCTGGCACTGGCACAGGTTTc > 5:33375/1‑140 (MQ=255)
cAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACTACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGTAACTGGCACAGGTTTc > 7:472943/1‑140 (MQ=255)
aGGTTGAAGAAGCAGGCGACAATCTGCCGGCTGACGACTAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTcc < 8:696198/140‑1 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACACAACTGCTATCGAGTCTGCGCTGCCTGCACGGGAAACTGCTCTGAAAGGGGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCa > 1:952193/1‑140 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGt < 8:27279/87‑1 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGt > 7:27279/1‑87 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGCCAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCa > 5:474087/1‑140 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCa > 4:55407/1‑140 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCa > 1:321527/1‑140 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCa > 7:619551/1‑140 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGCGAAACTGCTCTGAAAGGTGAACACAAAGCCGATATCGAAGAGAAAATGCAGGAACTGGCACAGGTTTCCCa > 3:368930/1‑140 (MQ=255)
aagaagCAGGCGACAATCTGCCGGCTGACGACAATACTGATATCGAGTCTGCGCTGAGTGCTCTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAATATTCAGGAACTGGCACAGGTTTCCCAGtaa > 3:526934/1‑140 (MQ=255)
aagaagCAGGCGACAAACTGCCGGCTGACGACAAAACAGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGaaa < 8:832087/140‑1 (MQ=255)
agCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGa < 6:875365/140‑1 (MQ=255)
cAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGCAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATg > 5:14946/1‑140 (MQ=255)
cAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATg > 5:14944/1‑140 (MQ=255)
cAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATg > 5:261848/1‑140 (MQ=255)
cGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGaa > 4:369160/1‑109 (MQ=255)
cGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGaa < 3:369160/109‑1 (MQ=255)
cAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCg < 8:429509/140‑1 (MQ=255)
cAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCg < 2:365145/140‑1 (MQ=255)
tGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCcag < 5:420800/140‑1 (MQ=255)
gCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCGCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAgcagca < 1:254110/140‑1 (MQ=255)
gCTGACGACAAAACTGCTATAGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAgcagca < 1:465334/140‑1 (MQ=255)
cgacAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATg > 2:137586/1‑140 (MQ=255)
acAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGTAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCTACATGcc < 3:722081/140‑1 (MQ=255)
acAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGcc < 4:98509/140‑1 (MQ=255)
acAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGcc < 1:334211/140‑1 (MQ=255)
acAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGcc < 5:420493/140‑1 (MQ=255)
cTATCGAGTCTGCTCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAACGCCGCTATCGAAGCGAAAATGCAGTAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCcagcagcag > 3:52270/1‑140 (MQ=255)
cTATCGAGTCTGCGCTGACTGCACTGGAATCTGCGCTGAAAGGTGATGACAAAGCCGCTATCGATGCGAATATGCAGGAACTGGCACAGGTTTCCCATAAACTGATGGAAATCGCCCAGCAGCTACATGCCcagcagcag < 4:78576/140‑1 (MQ=255)
cTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCcagcagcag > 8:699096/1‑140 (MQ=255)
tCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGCCt > 7:639958/1‑140 (MQ=255)
gAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGCCAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATAGCCCAGCAGCAACATGCCCAGCAGCAGACTGc < 4:838997/140‑1 (MQ=255)
aGTCTGCGCTGCCTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTAGCGAAGCGATAATGCAGGACCTGGCACAGGTTTCGCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGcc < 3:260408/140‑1 (MQ=255)
tCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCTGCAGCCTGCCgg > 8:420919/1‑140 (MQ=255)
tGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCcag < 7:574848/124‑1 (MQ=255)
tGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCcag > 8:574848/1‑124 (MQ=255)
tGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTg > 8:345095/1‑140 (MQ=255)
gACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATg < 8:203711/140‑1 (MQ=255)
gACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATg < 1:8786/140‑1 (MQ=255)
gACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATg < 4:55482/140‑1 (MQ=255)
gACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGG‑TTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGc < 2:809908/140‑1 (MQ=255)
gACTGCACGGGAAACAGCTCTGAAAGGTGAAGACAAAGCCGCTATCGACGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATg < 7:806364/140‑1 (MQ=255)
acagCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAAAGCAGGAACTGGCACAGTTTTCCCAGAAACAGATGAAAATCGCCCAGCAGCAACAAGCACAGCAGCAGACTGCCGGTGCTGATGc > 7:274458/4‑140 (MQ=255)
aCTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGc > 7:301180/1‑140 (MQ=255)
aCTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGCTTCTg > 1:210939/1‑140 (MQ=255)
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GACCGTAAGTTTGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGCTTCTG > NZ_CP022686/3509109‑3509385
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
