Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F35 I0 R1
|
195 |
10216.4 |
8585726 |
98.3% |
8439768 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,509,248 |
T→G |
31.7% |
L572R (CTG→CGG) |
dnaK → |
molecular chaperone DnaK |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,509,248 | 0 | T | G | 31.7%
| 183.4
/ 136.3
| 183 | L572R (CTG→CGG) | dnaK | molecular chaperone DnaK |
| Reads supporting (aligned to +/- strand): ref base T (68/57); new base G (33/24); total (102/81) |
| Fisher's exact test for biased strand distribution p-value = 7.48e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.70e-01 |
Only 100 of 185 total aligned reads displayed.
GACCGTAAGTTTGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGCTTCTGCA > NZ_CP022686/3509109‑3509387
|
cGTAAGTTTGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTAGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTg > 5:763929/1‑138 (MQ=255)
tAAGTTTGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGaaa < 1:492462/140‑1 (MQ=255)
aaGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGctc > 5:607169/1‑138 (MQ=255)
aaGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACGGCACTGGAAACTGCTCTg > 1:642154/1‑140 (MQ=255)
aaGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGGTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGATGACTGCACTGGAAACTGCTCTg > 7:636798/1‑140 (MQ=255)
agagCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGa < 1:427691/140‑1 (MQ=255)
agagCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGctct < 5:261328/138‑1 (MQ=255)
agagCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGa < 8:956698/140‑1 (MQ=255)
cTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCATGCGACAAACTGCCGGCGGACGACAAATCTGCGATCGAGTCTGCGCGGACTGCCCGGGATACTGCTCTGAAAgg > 8:496702/1‑140 (MQ=255)
cTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAgg > 7:3821/1‑140 (MQ=255)
cTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAgg > 4:852323/1‑140 (MQ=255)
tGGTTCAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCATGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAg < 6:975813/138‑1 (MQ=255)
tGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGCAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAg < 6:256408/138‑1 (MQ=255)
tGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGTCTGCACTGGAAACTGCTCTGAAAGGt < 4:359289/140‑1 (MQ=255)
tGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAg < 5:668333/138‑1 (MQ=255)
gggTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGt < 1:238418/139‑1 (MQ=255)
gACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTg > 2:86784/1‑134 (MQ=255)
aCTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACaa > 2:544813/1‑140 (MQ=255)
cgaaaCCAGGGCGACAATCTGCTGCACCGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGc < 8:317061/137‑1 (MQ=255)
cAACCAGGGCTACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCAGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCg > 4:421432/1‑140 (MQ=255)
cAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGACACTGCTCTGAAAGGTGAAGACAAAGCCg > 2:364666/1‑140 (MQ=255)
cAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCg > 3:406285/1‑140 (MQ=255)
cAACCACGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCg > 1:1023722/1‑140 (MQ=255)
aaCCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGcc > 6:582298/1‑138 (MQ=255)
aGGGCGACCATCTGCTGCACCGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACAGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCCCTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCAAta > 2:156252/1‑139 (MQ=255)
gACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGCCAAAGCCGCTATCGAAGc > 1:85525/1‑140 (MQ=255)
ccATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGa < 3:848118/140‑1 (MQ=255)
cATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGCCAAACTGCCGGCTGACGCCAAACCTGCTAGCGAGTCTGCGCGGACGGCACCGGAAACTGATCTGAAAGGTGAAGACAAAGCCGCTAGCGAAGCg > 5:733528/1‑138 (MQ=255)
ctgcACAGCACCCGTACGCCGTTTGAAGAAGCAGGCGACAAACTGCCGGCTGAAGACATAACTGCTATCGAGTCTGAGCTGACTGCACGGGAAACTGCTCTGAAAGGCGAAGACAAAGCCGCTATCGAAGCGAAAATg < 6:288683/138‑1 (MQ=255)
ctgcACAGCACCCGGAAGCAGGGTGAAGACGCCGGCGACAAACTGCCGGCTGACGACAAAACTGCGAGCGAGTCTGCGCTGACTGCACTGGACACTGCGCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCa < 4:974420/140‑1 (MQ=255)
ctgaACAGCACCAGTAAGCAGGTTGAAGAAGCATGCGAAAAACAGCCGGCTGACGAAAAAACTGATATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCa < 7:810700/140‑1 (MQ=255)
cacaGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGa > 8:558953/1‑140 (MQ=255)
acaGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAgg < 6:894126/138‑1 (MQ=255)
acaGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGaa < 4:386610/140‑1 (MQ=255)
acaGAACCCGGAAGATGGGTGAAGTAGCAGGCTACATACTGCCGGCTTACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAAGGCAgg < 6:538358/138‑1 (MQ=255)
caGCACCCGTAAGCAGGTGGAAGAAGCAGGCGACAAACTGCCGGCTGACGCCAAAACTGCTATCGAGTCTGCGCTGCCTGCACTGGAAACTGCTCTGAATGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAggc > 6:788327/1‑137 (MQ=255)
cacaCGTAAGCAGGTTGAAGCAGCAGGCGACAAACTGCAGTCTGACGACAAAACTGCTATCTAGTCTGCGCTGACTGCAATGGAAACGGCTCTGAAAGTTGAAGAAAAAGCAGCTAGAGAAGCGAAAATGCTGTAACTgg > 3:465518/1‑140 (MQ=255)
cACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTgg > 4:355452/1‑140 (MQ=255)
cACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGCACTgg > 8:34068/1‑140 (MQ=255)
aCCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGc < 4:890424/140‑1 (MQ=255)
cccGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGcc > 3:541515/1‑139 (MQ=255)
gTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAg > 8:1008592/1‑140 (MQ=255)
gTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAg > 4:63193/1‑140 (MQ=255)
gTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAg > 4:679824/1‑140 (MQ=255)
aaGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGt < 3:569583/140‑1 (MQ=255)
aaGCAGGGTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGt < 7:811188/140‑1 (MQ=255)
aaGCAGATTGAAGATGCATGCGACAAACTTCCGGCTTACTACAAAACTGCTATCGAGTCTGCGCGGACTGCACGGGAAACTGCTCTGATAGGTGAAGACTCAGCCGCTATCGTAGAGAAAATGCAGGTACTGGCACAg < 6:1023910/138‑1 (MQ=255)
ggTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGctct > 6:425029/1‑81 (MQ=255)
ggTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGctct < 5:425029/81‑1 (MQ=255)
ggTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGACGCGAAAATGCAGGAACTGGCACAGGTTTc > 6:239499/1‑138 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGCCAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGATAGGTGAAGACAAAGCCGCTATCGAAGCGTAAATGCAGGAACTGGCACAGGTTTcccc > 3:502796/1‑139 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTTACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCa > 7:271699/1‑140 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGCCTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCa > 8:190841/1‑140 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCa > 3:722490/1‑140 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCa > 2:612509/1‑140 (MQ=255)
gTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTCCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCa > 3:899026/1‑140 (MQ=255)
tGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAACACTGCTATCGAGTCTGCGCTGCCTGCACTGGACCCTGCTCAGAAAGGTGAAGACAACGCCGCTATCGCAGCGAAAATGCCGGAACTGGCACAGGGTTCCCAGa > 2:685620/1‑140 (MQ=255)
tGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGctct < 6:694755/78‑1 (MQ=255)
aagaagCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGaaa < 7:14374/140‑1 (MQ=255)
cgCACGCGACAAACTGCCGGCAGACGACAATACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCCGAAACTGa < 1:153162/139‑1 (MQ=255)
cAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATg > 2:998254/1‑140 (MQ=255)
cAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATg > 3:611493/1‑140 (MQ=255)
cAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATg > 3:755490/1‑140 (MQ=255)
cAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATAGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATg > 1:199744/1‑140 (MQ=255)
cAGGCGACAAACTGACGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGATAGGTGAAGACAAAGCCGCTATCGAAGCGATAATGCAGGAGCTGGCACAGGTTTCCCAGAATCTGagg > 2:170399/1‑138 (MQ=255)
ggCGACATACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGa < 3:598478/140‑1 (MQ=255)
ggCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATg > 6:1042964/1‑138 (MQ=255)
ccaCAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTTCTCTGACAGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGaaa < 8:873321/138‑1 (MQ=255)
gACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGaa > 5:379218/1‑138 (MQ=255)
aaCTGCCGGCTGACGACAATACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCg < 6:78489/138‑1 (MQ=255)
aaCTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGcc < 2:410704/140‑1 (MQ=255)
aaCTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGAGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGcc < 7:684268/140‑1 (MQ=255)
tGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCcag < 1:346996/140‑1 (MQ=255)
ccGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCcagca < 8:776698/140‑1 (MQ=255)
gCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAgcagca < 3:2436/140‑1 (MQ=255)
gCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAgcagca < 3:633518/140‑1 (MQ=255)
tGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAAc < 7:607896/140‑1 (MQ=255)
gacgacAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACa < 3:892515/140‑1 (MQ=255)
cgacAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGa < 4:487485/110‑1 (MQ=255)
acAAAACTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGTTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGcc < 2:852372/140‑1 (MQ=255)
aaCTGCTATCGAGTCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCcagc > 2:109237/1‑140 (MQ=255)
cTATCGAGTCTGCGCTGACTGCACTGGAACCTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCcagcagc < 6:547874/138‑1 (MQ=255)
cTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCcagcagcag < 2:673339/140‑1 (MQ=255)
cTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCcagcagcag > 4:968158/1‑140 (MQ=255)
cTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCcagcagcag < 1:544813/140‑1 (MQ=255)
gAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGc < 3:1035457/140‑1 (MQ=255)
gTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCg < 3:18789/140‑1 (MQ=255)
tCTGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCgg > 8:893823/1‑140 (MQ=255)
tGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTg > 3:363501/1‑140 (MQ=255)
tGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCTGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCgggg > 1:276393/1‑138 (MQ=255)
tGCGCTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCCGCAGCAACATGCCCAGCAGCAGACTGCCGGTg > 2:728726/1‑140 (MQ=255)
cgcTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTg > 5:893614/1‑138 (MQ=255)
cgcTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGAAACATGCCCAGCAGCAGACTGCCGGTg > 5:188046/1‑138 (MQ=255)
gcTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTg > 2:520734/1‑140 (MQ=255)
gcTGACTGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTg > 2:675448/1‑140 (MQ=255)
aCTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGc > 1:868169/1‑140 (MQ=255)
aCTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGc < 7:947777/140‑1 (MQ=255)
tGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGc > 5:332798/1‑138 (MQ=255)
tGCACGGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGc > 5:796920/1‑138 (MQ=255)
tcTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGCTTCTg > 8:730230/2‑140 (MQ=255)
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GACCGTAAGTTTGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGCTTCTGCA > NZ_CP022686/3509109‑3509387
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
