Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F2 I0 R1
|
122 |
5985.5 |
7364544 |
98.3% |
7239346 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,361,489 |
T→G |
14.4% |
V188G (GTT→GGT) |
nikA → |
nickel ABC transporter substrate‑binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,361,489 | 0 | T | G | 14.4%
| 234.8
/ 9.4
| 138 | V188G (GTT→GGT) | nikA | nickel ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (40/75); new base G (20/3); total (60/78) |
| Fisher's exact test for biased strand distribution p-value = 4.14e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 138 total aligned reads displayed.
CCTGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACTACCCGCGCGGTGGCGTTTGAAA > NZ_CP022686/2361355‑2361623
|
ccTGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTaa > 1:376603/1‑139 (MQ=255)
cTGAAACGCTCCTCCTAACCTTACCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTAATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGTAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACa < 1:949254/140‑1 (MQ=255)
tGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCTCAGTTTAAAAACCACGAAACCATGACCGGAAGTAAAGCGCCGATTGGCACCGGGCCGTGGGTGTTAc > 5:726891/1‑138 (MQ=255)
tGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAACCCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTaa > 6:378935/1‑137 (MQ=255)
aaaGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAgg > 5:401282/1‑138 (MQ=255)
cgcgcATACTATCCTTTCCTCCAAGAACTGGCCCTGCCCCGCCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAACCCATGAACGCAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATc < 1:137584/139‑1 (MQ=255)
cgcCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTACACGAATCGa > 4:380480/1‑140 (MQ=255)
gcCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGaa > 7:196730/1‑140 (MQ=255)
gcCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAAACACGAAACCATGAACGGAATTAAAGCGACGATTGGCTCCGGGCCGTGGGTTTTACAGGATTCGaa > 3:432802/1‑140 (MQ=255)
gcCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGATTTATCGCACCCTCGCAGATTAAAAACCACGAAACAATGAACGGAATTAACTCGCCGATTGGCACCGGACCTTGGGTTTTAAAAGAATAGaa > 1:538418/1‑140 (MQ=255)
ccatactaTCATTTACTGCAACAACTGGCCCTGCCCAGTCCTTTCAGTTTTATCGAACCCTCTCAGATTAAAAACCACGAAACCATGAACGGAATTAAATCGCAGATTGGCACCGGGCCGTGTGTTTTACAGTAATCGaa < 4:163311/137‑1 (MQ=255)
ccTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCATTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGaaa < 7:298293/140‑1 (MQ=255)
ccTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGATCGTAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGaaa < 1:289660/140‑1 (MQ=255)
ttgcTTTCCTGGAAGTCGTGTCCCTGCCCCGTCCTTTCCGTTTTATCGGACGATAGCAGTTTAAATACCTCGAAACCTTGACCGGAATTATAGCGCCGATTTGCACCGGGCCGTGGGTTTTACAGGAATCGATACTGTAt < 4:699634/137‑1 (MQ=255)
aTCCTTTCCTTCAAGTATTGGCCGTGCCACGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAATAACCACGAAACCATTAACGTAATTAAATCGCCGATTGGCACCGGGCCGTTGGTTTTACAGGAATCGAAACTGAAt < 3:369103/140‑1 (MQ=255)
aTCCTTTCCTGCATCAACTGGCCCTGCCCCTTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGa < 5:596822/138‑1 (MQ=255)
aTCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGa < 6:9393/138‑1 (MQ=255)
aTCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAAt < 3:782765/140‑1 (MQ=255)
aTCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAAt < 3:583377/140‑1 (MQ=255)
aTCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAAt < 1:1605/140‑1 (MQ=255)
aTCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATCAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGa < 5:503792/138‑1 (MQ=255)
ttttCCTGCAAGAACTGGCCCTGCCCCGGCCTTTCGGTTTTATCGCACCCTGGCAGTTTAAAAACCCCGAACCCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTGTTACAGGAATCGAAACTGAATCAg < 1:915601/139‑1 (MQ=255)
ttCCTGCAAGAACTGGCCCTGCCCGGTCCTTTCCGTTTTATCGCACCCACTCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGtc < 4:224167/140‑2 (MQ=255)
ttCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCCCCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTAACTGAATCGAAACGGAAtaacta > 7:206848/1‑135 (MQ=255)
tCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGCAACTGAATCAGTAc > 2:648866/1‑140 (MQ=255)
tCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGGGGGGTTTACAGGAATCGAAACTGTATCAGttc > 2:277333/1‑138 (MQ=255)
tCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATAGAAACCTCGCAGTTTAAAAACAACGAAACAATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGGGGGTTTTAGAGGCATCGAAACTGAATCAGGAc > 8:166912/1‑140 (MQ=255)
gcTGAAATAACTGGCCCTGCCCCGTACTTTCCTTTTTATCGAACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGTATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTAct < 1:484005/139‑2 (MQ=255)
ccTGCACGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACg < 4:453538/140‑1 (MQ=255)
ccTGCAAGCACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAACCCACGAAACCATGAACGTAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACg < 4:331201/140‑1 (MQ=255)
ccTGCAAGACCTGGCCCTGCCCCTGCCTTTCCGTTTTTTCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACg < 3:279983/140‑1 (MQ=255)
ccTGCAAGAACTGGCCCTGCCGCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAACCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACg < 7:808056/140‑1 (MQ=255)
ccTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACg < 8:729249/140‑1 (MQ=255)
ccTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACg < 2:915875/140‑1 (MQ=255)
cTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTAAAGGAATAGAAACTGAATAAGTAc > 5:786829/1‑138 (MQ=255)
cAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATCAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGCAACGAAACAGAATCAGAACGAt > 6:842512/1‑138 (MQ=255)
aGAACAGGCCCTGCCCCGTCCTTTCCGTTTTATAGCACCCTCGCATTTTAAAAACCAAGAAACCATGAACGGAATTAAAGCGCAGATTGGCACCGGGCCGTGGGGTGTAACTGAATAGCAAATCAATCAATACGATgg > 5:401807/1‑137 (MQ=255)
gCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAACCCACGACACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTACAGGTATCGAAAATGAATATGTTCTATTTCTTCGTcag > 8:404248/1‑138 (MQ=255)
gCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTccc > 2:936816/1‑139 (MQ=255)
acccTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTGTAAAGGAATCGAAAATTAATCAGGACGATGTCTTAGTc > 5:350574/2‑138 (MQ=255)
tGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTa < 6:652047/138‑1 (MQ=255)
gCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAACACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTaa < 5:842530/138‑1 (MQ=255)
gCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACg > 2:460965/1‑140 (MQ=255)
gCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACg < 1:460965/140‑1 (MQ=255)
gCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATAAGTAAGATGTCTTAGTACGTAACg > 2:631512/1‑140 (MQ=255)
gCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTAAAGGAATCGAAAATGAATCAATACTATTTCTAGGTACGTAACg > 1:605725/1‑140 (MQ=255)
cccGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTACATGAATCGAAACCTAATCAGTACGAAGAATTAGTCCggtacg > 5:3486/1‑133 (MQ=255)
cccGTCCTTTACGTTTTATCGCACACTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTACAGGTATCCAACCGGCATGATTTCGATGTGTTAGTCGGGAACg > 6:212167/1‑138 (MQ=255)
ccagTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACTGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATTTCTTCGTCCGTAACg < 6:361073/135‑1 (MQ=255)
gTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTTAAGGAAAAGAAACAGAATCAGTAAGATTTCTTAGTCCGGAAAGaaaaa > 2:24452/1‑139 (MQ=255)
gTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCAAGAAACCATGAACGGATTTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGACACAGAATCCTTACTATGTCTTCGTCCGTAAAGAAAac > 8:408209/1‑140 (MQ=255)
tCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTAGAGGAATAGAAAATGAATAAGTACGATGTCTTCGTACGGTACGAAAaca > 1:347462/1‑139 (MQ=255)
tCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTACAGGAATAGAAAATGAATCAGTAACCTGTCGTCGGACCTAACGaaaaat > 1:748658/1‑138 (MQ=255)
cTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATAGAAACTGAATAAGTACGATGTCTTAGTCAGTAACGAAAaca > 6:492508/1‑137 (MQ=255)
tttCCGTTTTTTCGCACCCTCGCGGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAactact < 3:764622/140‑1 (MQ=255)
tttCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAactact < 4:880939/140‑1 (MQ=255)
tCCGTTTTATCGCCCCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCCCCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTAGTCCGTAACGAAAACGACTgg > 4:450811/1‑140 (MQ=255)
tCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGACACCATGAACGGAATTACAGCGCCGATTGGCACCGTGCCGTGGGTTTTACAGGAATCGAAACTGAATAATTAAGATTTCTTCTGCCGTAAAGAAAACGACAgg > 8:722944/1‑140 (MQ=255)
tCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATAGAAAATCAATCAGTACCATTTATTAGTCCGGAAAGAAAAATACAgg > 1:491452/1‑140 (MQ=255)
ttATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGaa < 8:469992/140‑1 (MQ=255)
aTCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATAGAAACTGAATCAGTAAGATGTCTTAGTCCGTAACGAAAACAACTGGGGCGaaaa > 7:288614/1‑140 (MQ=255)
aCCCTCGCAGTTTAACAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGcc < 6:330626/138‑1 (MQ=255)
aCCCTCGAAGTTTAAAAACCACGAAACCATGGACGGAATTAACGCGCCGATTGGCACCGGGCCGTGGGGTTTACAGGAATCGAAACTTAATCAGTACGATGTCTTCGTCCGTAACGTAAACTACTGGGGCGAAAAGcc < 6:743944/138‑1 (MQ=255)
aaaaaaCACCAAACCATGAACTGAATTACAGCTCCGATTGGCACCGGGCCGTGGGTTTTACATGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 2:538418/140‑1 (MQ=255)
aaaaaCCACGTAACCATGAACGGAATTAAAGCGACGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAATCCGGCGATTAAAAAGAt < 3:757698/140‑1 (MQ=255)
aaaaaCCACGAAACCATGAACTGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 8:262863/140‑1 (MQ=255)
aaaaaCCACGAAACCATGAACGGAATTACAGCGCCGCTTGGCACCGGGCCGTGGGTTTTACAGGAATCTAAACTGACTCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 3:865219/140‑1 (MQ=255)
aaaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 7:869870/140‑1 (MQ=255)
aaaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 4:98449/140‑1 (MQ=255)
aaaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 7:504995/140‑1 (MQ=255)
aaaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 2:417290/140‑1 (MQ=255)
aaaaaCCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCAACGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 3:511989/140‑1 (MQ=255)
aaaaaCCACGAAACCATGAAAGTAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGTAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCAGGCGATTAAAAAGAt < 3:346494/140‑1 (MQ=255)
aaaaaCCACGAAACCATCAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGAt < 1:798383/140‑1 (MQ=255)
aCGAAACCATGAACGGAATTAAAGCGACGATTGGCACCGGGCCGTGGGTTTTACAGGATTCGAAACTGAATCACTACGAAGGAATCGGACGTTAAGAAAACTACTGGGGCGAAAAGCCGGCGAATAAAAAGATCACCttt > 8:318199/1‑140 (MQ=255)
gAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTTCAGGAATAGAAACTGAATAAGCACGATGTATTAGTCCGTTACGAAAACTACAGGGGCGAAAAGCCGGCGCTTAAAAATATAACCatt > 5:755732/1‑138 (MQ=255)
acccgcaaCGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAAc < 6:187453/132‑1 (MQ=255)
aCCATGAACTGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGt < 7:749981/140‑1 (MQ=255)
aCCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGt < 4:181535/140‑1 (MQ=255)
aaCGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAAACGAAAATGAATCAGTACGATGTCTTACTCCGTAACCAAAACAACAGGGGCGAAAAGCCGGCGATTAAAAAGATAACCTTTAACGTGAta > 5:582290/1‑137 (MQ=255)
cGGACTTTAAGCGCCGATTGGCACAGGGGCGGTGGTTTTACAGGAATCGAAACAGAATCAGTACGATGTCTTAGTGCTTAACGTAAACTACGGGGGGGAAAATCCGGCGATTAAAAAGATCACCTTTATCGTGATccc < 6:590623/138‑1 (MQ=255)
cGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGGTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATccc < 6:850183/138‑1 (MQ=255)
gAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGAc < 4:840992/140‑1 (MQ=255)
ttAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTGTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGGGCTCCCGGAcc > 6:479542/1‑138 (MQ=255)
tAAATCGCCTATTGGCACCGGGCCGTGGGTTTTAAAGGAATAGAAACTGAATCAGTACGATGTCTTCGTCCGTAAAGAAAACTACTGGGGCGAAAAGCTGGCGATTAAAAATATCACCTTTAACGTGATCCCGGAccc < 6:586569/138‑1 (MQ=255)
gcgcCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACt < 5:492508/138‑1 (MQ=255)
ccGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACTAcc < 6:245430/138‑1 (MQ=255)
ccGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACAGAATCAGTACGATGTCTGCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACTACTcg < 2:186911/140‑1 (MQ=255)
ccGATTGGCACCGGGCCGTGGGTTTTAAAGGAATCGAAACTGAATAAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACTACCcg > 4:697808/1‑140 (MQ=255)
gATTGGCACCGGGCCGTGGGTTTTTCAGGAAACGAAACTGAATCAGTTCGATGTCTTCGTCCGTAACGAAAAATACTGGGGCGAAAAGCCGGCGAATAAAAAGATACCCTGTAACGTGCTCCCGGACCCGACTAcccc > 5:830148/1‑137 (MQ=255)
gATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATAAGTACGATGTCATCGTCCGTAACGAAAACTACTGGGGCGAAAAGACGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGAATAcccc > 5:641505/1‑137 (MQ=255)
gATTGGCACCGGGCCGTGGGGTTTTCAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGCTTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACTAcccc > 5:366525/1‑137 (MQ=255)
gATTGGCACCGGGCCGTGGGGTTTAGAGGCATCCAAAAGTAATAAGTAAGATGTCTTAGGACGGGAACCACACTACAGGGGCGAAAAGCCGGCGATTAAAAAGATACCCTGTAACGTGATACCGGCCCCGACTAcccc > 6:650234/1‑137 (MQ=255)
gATTGGCACCGGGCCGTGGGGTTTACAGGTATCGAAACGGAATCAGTACGAAGTCTTCGTCCGTAACGAAAAAGACTGGGGCGAAAAGCCGGCGATTAAAAAGAGAACCTTTAACGTGATCCCGGACCCGCCTAcccc > 5:265744/1‑137 (MQ=255)
gCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACTACCCGCGCGGTg < 1:131896/140‑1 (MQ=255)
ccACCGGGCCGTGGGTTTTACAGGAATCGAACCTGAATCACTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACTACCCGCGCGGTg < 4:554117/139‑1 (MQ=255)
gggCCGTGGGGTTTACAGGACTCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCAGACTACCCGCGCGGTGGCGtt < 7:647101/140‑1 (MQ=255)
ggCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACTACCCGCGCGGTGGCGttt > 4:147020/1‑140 (MQ=255)
ccGTGGGTGTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATAACCTTTTACGGGATCCCGGACCCGACAACCCGCGCGGTGGCGttt > 6:658245/1‑138 (MQ=255)
gTGGGTTTTACCCGAATCGAAACTGAATCAGTACGATGTCTTCGTCCTTAACGAAAACTACTGGGGCTTAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACTACCCGCGCGGTGGCGTTTGaaa < 1:736937/140‑1 (MQ=255)
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CCTGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCACCCTCGCAGTTTAAAAACCACGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGGCCGTGGGTTTTACAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCGGCGATTAAAAAGATCACCTTTAACGTGATCCCGGACCCGACTACCCGCGCGGTGGCGTTTGAAA > NZ_CP022686/2361355‑2361623
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
