Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F2 I0 R1
|
117 |
5184.3 |
6857682 |
98.3% |
6741101 |
135.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,394,287 |
T→G |
14.2% |
N115T (AAC→ACC) |
chuS ← |
hematinate‑forming heme oxygenase ChuS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,394,287 | 0 | T | G | 14.2%
| 267.0
/ 9.7
| 150 | N115T (AAC→ACC) | chuS | hematinate‑forming heme oxygenase ChuS |
| Reads supporting (aligned to +/- strand): ref base T (45/80); new base G (22/3); total (67/83) |
| Fisher's exact test for biased strand distribution p-value = 1.43e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 154 total aligned reads displayed.
CTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394154‑2394423
|
ctcATCGGTGATAAACCGTGCCAGAAGCTCCCTCCATGCCGCCATATCGGTATTGTCGGTGGCATAACCTGTTAGTAATGCCTCGCCCGGATGATCAAAGCACTGAATACTCTGGCGTTCGCCACGCGCCGTGGGTTCtt > 4:608393/1‑140 (MQ=255)
tcATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGGATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCttt < 4:510469/140‑1 (MQ=255)
cATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCtt < 7:510559/138‑1 (MQ=255)
aTCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAAAGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGttttgtatgt > 3:479523/1‑134 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGgtttgatttat > 4:266995/1‑133 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTg < 7:574725/138‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAt < 6:296765/140‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAt < 5:828436/140‑1 (MQ=255)
cGGTGATAAACCGTGCCAGCAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGtttgtttgt > 7:15306/1‑137 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTgt > 2:414669/1‑137 (MQ=255)
gATAATCCGTGCCAGAAGCTCACTCCATGCGGCCATATCGGTATTGTCTGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGa < 5:326769/140‑1 (MQ=255)
aCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAaca < 4:444946/140‑1 (MQ=255)
ccGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAacac < 4:571533/140‑1 (MQ=255)
cGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAaca < 7:18962/138‑1 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGATTACTCTGTCGTTCGCCACGAGCCGTGTTTTATTTTATTTGGAAAACACTgg > 3:254549/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTTATTTGGAAAACACAgg > 3:365109/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATTTGGAAAAAACTgg > 5:125596/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGAGTTGGGAAacaaagg > 3:203458/1‑136 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGGTTGTTTGATGTGGAAAACACggg > 5:527057/1‑140 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTATGTGGAAAAAACTgg > 8:556268/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTGTTGTTTGATGTGGAAAACACggg > 8:16336/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCGGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATTTTGCAAACACTgg > 1:821739/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGAATCGCCCTGATGATCAAAGAACTGAATACTCTGGAGTTCGCCACGAGCCGTGTTTTCTTTGATTTTGTAAACACTgg > 2:727130/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACGTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTGTTCTGGGATGTGGAAAACACAgg > 1:854859/1‑138 (MQ=255)
gcgcACTCCATGCCGCAATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGGTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCatt < 7:236465/135‑1 (MQ=255)
gCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCattga < 4:26532/140‑1 (MQ=255)
cTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCattgat < 3:127400/140‑1 (MQ=255)
cACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCCCGAGCCGTGGTTTATTTGTTGTGGGAAACCCTGG‑GCCcttgtttt > 5:372466/1‑139 (MQ=255)
cATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTgaga < 7:306020/138‑1 (MQ=255)
cATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTgaga < 7:84678/138‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTATTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGaaa < 2:515108/138‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCATAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGaaa < 2:882366/138‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAACCACTGG‑CCCCTTGATTTAGaaaaa > 4:658442/1‑138 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGaaa < 8:529416/138‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACa < 4:62285/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGGAAACACAGG‑CCCATTGATTGAGaaaaa > 3:358414/1‑138 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCAGAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAAAACACTGGCGTTCGCCACGAGCCGTGTGTTCGATGATTGGGAAAAAAAAGT‑CCCAATGAATGAGAAACa > 3:310924/1‑140 (MQ=255)
tGCAGCCATATCGGTATTGTCGGTGGCATAATCTTTTATTAATGCATCGCGCTGATGATCAAATAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGTAAACACTGG‑CCCATTGATTGAGaaa < 8:16465/138‑1 (MQ=255)
ccgccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTTATGTGGAAATAACAGG‑TCCCGTGATTTTGAAAcc > 1:728401/1‑137 (MQ=255)
ccAGATCGGTATTGTCGGTGGCATAAACTGTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACCAGCCCTGTTTAAATTTATGTTGAAAACACTTG‑CACATTTATTTAGAAAAAGAcct > 4:298072/1‑138 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACTGG‑GCCATTGATTGAGAAAAAGACGtt > 6:209811/1‑139 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACCGACGTa > 4:114580/1‑140 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATAGCACTGATGATCAAAGAACAGAATACTCTGGCGTTAGCCACGAGACGTGTTTTATTTGAAGTGGAAAACACAGG‑GCCAGTGATTGAGAATCAgccctt > 4:22682/1‑135 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGGTTGTTTGATGTGGAAAACACAGG‑GCCCATGATTGATAAACACACgga > 1:806496/1‑136 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATAGCCCTGATGATCAAAGAACTGAATACTCTGTCGTTCGCCACGCGCCGTGTGTTATTTGATATGGAAAAAAAAGG‑CCCAATGATTTAGAAAAACACgaa > 2:611510/1‑136 (MQ=255)
aTTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGTTGTGGTAAACACTGG‑CCCATTGATTGAGTAACCGACGTAAATACac > 7:750674/1‑137 (MQ=255)
aTTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGATGTGGAAAACACTGG‑CCAATTGATTGAGAAACAGACGTAAATACAg > 2:215065/1‑138 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTTGAAAAAAATTG‑CCCAGTGATTGATAAACAGACGTAAATACAGagcgcgcg > 6:311369/1‑140 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 7:411547/138‑1 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 1:368087/138‑1 (MQ=255)
gCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGa > 7:268468/1‑138 (MQ=255)
gCATAAACTTTTACTTATGCATCCCCCTGATGAACAAAGAACAGCATACTCTGGCGGTCGCCCCGATCCGTGTTTTGGTTGTTGGGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAtt < 6:553165/140‑1 (MQ=255)
cATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGAAAACACAGG‑CCCATTGATTGATAAACAAACGTAAATCCACCGCGCGCCGAt > 2:258801/1‑138 (MQ=255)
cATAAACTTTTAGTAATGCAGCGCCCTGATGATCAAAGAACTGAATACTCTGGCGATCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAt < 7:772061/138‑1 (MQ=255)
aaaCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTGCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAgg < 6:247465/140‑1 (MQ=255)
aaaCTTTTAGTAATGCAGCCCCCTGATGATCAAAGAACTGAATACTCTGGCGGTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAgg < 3:149630/140‑1 (MQ=255)
tttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATc < 1:824569/138‑1 (MQ=255)
tttAGTAAGGCATCGCCCTGATGATCAAAGAACTGAAGACTCTTGCGTTCGCCACGAGACGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCaa < 6:449898/140‑1 (MQ=255)
ttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGATGTGGAAAAAACAGG‑CCCCATGTTTGAGTAACAGACGTAAATACCGCGCGCGCCGATTGAGGATCaaa > 5:699096/1‑139 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCAt < 5:135157/140‑1 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCAt > 8:43028/1‑138 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGt < 4:302453/140‑1 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGt < 3:127183/140‑1 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGt < 3:43436/140‑1 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGATTTGGGAAACACTGG‑GCCATTGTTTGAGAAACAGACGGAAATACAGCGCGCGCCGATTGAGGTTCAATCCGGCAt > 7:294676/1‑138 (MQ=255)
cGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGAAAACACAGG‑CCCATTGATTTAGAAAAAGACGTAAATCAAGCGCGCCCGGATTTAGGAACAATCCGGCATGTACg > 4:533104/1‑140 (MQ=255)
cccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTGTGCTGTGGTAAACACTGG‑GCCATTGTTTTTTAAACAGGAGTTAATCACTCGCGCGCGGATTGAGTATCAATCCGGACTGTTCGtt > 6:480442/1‑140 (MQ=255)
cccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGTAAACACTGG‑CCCATTGATTGAGAAAAAGACGGAAATACAGCGCCCGCCGATTGATGTTCAATACGGCATGTCCCtt > 3:619125/1‑140 (MQ=255)
atgatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGGTTTATTTTGAAAACACTGGCCCCATTATTTTATAAA‑ACACGTAAATAAATCCCGCCCGGAATGAGGAGCAATACCGCATGTGCGGTAAAAt > 6:438060/1‑140 (MQ=255)
gatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCAGGTCCGTTCAAATGc < 6:762148/140‑1 (MQ=255)
atCTAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCt < 4:710664/140‑1 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACa > 4:415253/1‑81 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGGAAATACAGCGCGCGCGGATTGAGGATCAATCCGGCATTTCCGTTCAAATGCTgg > 6:497600/1‑140 (MQ=255)
aGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTATGTGGTAAACACAGG‑CCCATTGATTGTGAAACAGACCGAAATACACCGCGCGCGGATTGAGGATACATACGGCATGTGCGGTCAAATTCTGGt > 1:538050/1‑138 (MQ=255)
aGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTggg > 8:255385/1‑137 (MQ=255)
aaCTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATTTGGAAAAAACAGG‑CCCATTGAATGAGAAAAAGACGTTAATCAACCGCCCGCGGAATGATGATCAATACGGCATGTGAGTTCAAATGCAGGttttt > 6:250197/1‑138 (MQ=255)
aaCTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGTTTGAGAAACAGACATAAATACAGCGCCCGCGGATTGAGGATCAAAAAGCCAAGTCCGTTCAAATGCAGGTTtgt > 6:319806/1‑140 (MQ=255)
aCTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTtgtg < 5:79561/140‑1 (MQ=255)
cTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGGAAAACAATGG‑GCCCATGATTGTTAAACAGAAGTAAATACACCGCCCGCGGATTGTGGATCAATACGGCGTGTACGTTGAAAAGCTGGGTtttgt > 3:847388/1‑139 (MQ=255)
tGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGaa < 5:447217/140‑1 (MQ=255)
ctctGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCAcc < 3:554087/140‑1 (MQ=255)
tctGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTTAGAAACAGACGTAAATACAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGGTTGTGTACGCAccc > 4:505569/1‑139 (MQ=255)
ctGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCTAATGCTGGTTTGTGAACGCACCaa < 3:147304/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTTTTTTCTTTGATGTTGAAAACACTGG‑CCCATTGATTGAGACACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 7:645745/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 1:176847/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 7:43028/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 1:437771/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 6:755703/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 5:562149/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 5:438372/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 4:540833/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:660796/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:194130/140‑1 (MQ=255)
gCGTTCGCCACGAGCCGTGTTTTCGTTGATGTGGATAACACTGG‑GCCATGGATTTAGAAACAGACGTAAAGCCAGCGCGCGCGGATTGGGGGTCAATACGGCCTGTCCGTTCATATTCTGGGTTGTGAACGCACCacc > 2:714010/1‑136 (MQ=255)
aCGAGCCGTGTTTTCTTTGCTGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 3:366764/140‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATg < 7:745233/138‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATg < 2:98845/138‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATg < 8:676083/138‑1 (MQ=255)
cGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGAc < 3:533104/140‑1 (MQ=255)
gtgtTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCg < 1:138171/138‑1 (MQ=255)
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CTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGG‑CCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394154‑2394423
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
