Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F13 I0 R1
|
150 |
9496.0 |
7621532 |
98.4% |
7499587 |
136.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,394,287 |
T→G |
17.2% |
N115T (AAC→ACC) |
chuS ← |
hematinate‑forming heme oxygenase ChuS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,394,287 | 0 | T | G | 17.2%
| 315.9
/ 21.0
| 204 | N115T (AAC→ACC) | chuS | hematinate‑forming heme oxygenase ChuS |
| Reads supporting (aligned to +/- strand): ref base T (69/94); new base G (37/3); total (107/97) |
| Fisher's exact test for biased strand distribution p-value = 2.59e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 212 total aligned reads displayed.
CGTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394148‑2394423
|
ggTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGTCATAAACTTTTAGTAATTCATCGCCCTGATGATCAAACAACTGAATACTCTGGCGTTCGCCACGAGCCgtgt < 7:519824/139‑1 (MQ=255)
ttCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCACTGATGATCAAAGAACTGAATACTCTGGAGTTAGCCACGAGCCGTGttttt > 6:196242/1‑139 (MQ=255)
cATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTg < 7:94897/140‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAACCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCCCGCGCCGAGTTTTATTTG‑aa > 8:576904/1‑139 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑At < 3:196890/140‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCATTggt > 2:268129/1‑138 (MQ=255)
tGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTG‑ATGTgg > 4:733119/1‑140 (MQ=255)
tGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTGTTTTTTG‑ATGTgg > 1:300217/1‑140 (MQ=255)
aTAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGaa < 3:851879/140‑1 (MQ=255)
aTAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCGTTG‑AAGTggta > 2:347823/1‑138 (MQ=255)
aCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAaca < 7:644884/140‑1 (MQ=255)
tGCCAGAAGCTCCCTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGGTCGCCACGAGCCGTGGTTTCTTTG‑ATGGGGTAAACACggg > 8:751633/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGTCATAAACTTTTAGTAATGCATCGCCCTGATGATAAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTgg < 2:879065/140‑1 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCTATCGCCACGAGCCGTGATTACTATG‑TTTTGGAAAAAACAgg > 5:603082/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGGTTTCTTTG‑ATGTGGAAAAAACTgg > 2:917243/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATTTGGAAAACACTgg > 4:276882/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTgg > 2:690510/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGTATG‑GGAAAACACggg > 4:261180/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTG‑CTGTGGTAAAAACAgg > 4:965218/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTG‑ATGTGGAAAACACTgg > 4:469445/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTT‑ATGTGGAAAacccggg > 5:141543/1‑135 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTG‑ATGTGGAAAACCCTgg > 8:180811/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCAGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCAGGCGTTCGCCACGAGCCGTGGTTTATTTG‑ATGGGGTAAACACTgg > 1:184293/1‑140 (MQ=255)
cACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGGTTTATTTG‑ATGTTGTTAACACAGGCCCattgtttt > 1:229573/1‑139 (MQ=255)
aCTCCATGCCGCCAAATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATAGCCCTGATGATCAAAGAAATGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATGTG‑ATGTTGAAAACACTAGCCCAaagattga > 6:231167/1‑140 (MQ=255)
cATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGaaa < 8:332681/140‑1 (MQ=255)
cATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGaaa < 5:98831/140‑1 (MQ=255)
cATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGaaa < 1:698098/140‑1 (MQ=255)
cATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTG‑ATTTTGAAAAAACATGCCCAATGATTTAGaaa > 1:545407/1‑140 (MQ=255)
tGCCGCGATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCTCGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGTTTGAGAAACa < 5:583406/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTTGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAAATGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 5:132275/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCCCGAGCCGTGGTTTCTTTG‑TTTGTGTAAACCCTGGCCCAGTGAGTGAGaaaac > 6:170714/1‑138 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTT‑ATGTGGTAAAAAATGGCCCATTTATTGATAAACa > 7:556456/1‑140 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 4:297648/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTT‑TTGGTGAAAACGCAGGCCCAGTGATTTTGAAACa > 1:378596/1‑140 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGGTTG‑ATTTGGATCAACCGGGCCCATTGGGTGTGAAACa > 5:736369/1‑140 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGAGCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 2:852941/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACATTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGACACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 6:369923/140‑1 (MQ=255)
tGCCGCCATATCGGTAATGTCCGTGGCATAAACTTTTAGTAATGCATCGCCCTGAAGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTT‑TATTGGTAAACACAGGCCCATTGATTTAGAAACa > 6:95068/1‑140 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTCTTTG‑ATTTGGAAAACACTGGCCCATTGATTTAGAAACAGCCgga > 4:697666/1‑138 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTT‑ATGTGGAAAACACTGTCCCAATGATTTAGAAACAGACGTaaa > 2:761865/1‑140 (MQ=255)
gTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGGTGCGTTT‑ATTTGGAAACCCCTGGCCCATGGATTGAGCAACAGCCGTaaaaaccc > 3:663168/1‑135 (MQ=255)
gTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTT‑ATGTTGTAAACCCTGGCCCATTGATTGAGAAACAGCCGTTAATCCCccgcgc > 4:614811/1‑140 (MQ=255)
tCGGTGGCATAATATTTTTGTAATGCTTAGCCATGATTATCTAAGATCTGAATACTCTGTCGTTCGAGTCGATCCGTTTTTTCTTTG‑ATGTGGAAAACACTGGCCATTTGATTGATAAACCGACGTAAATCCAgcgcgcg < 3:299092/140‑1 (MQ=255)
gcGGGGGCATAAACTTTTGGTAATGCATCGCCCTGATGATCAAAGAACTGAATACGCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 3:74719/139‑1 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTG‑ATGTGTAAAACACAGGCCCATTTATTGAGAAACAGACGTAAATCCAccgcccgcc > 7:695102/1‑139 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTGTGTTG‑ATTGTGAAAACACGGGCCCATTGATTGAGACAAAGCCGTAAATAAAGcgcgcgcg > 4:208259/1‑140 (MQ=255)
gggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGACCTGACTAGTCTGGCGATCGCCACGATCCGTGGATTCTTTG‑ATGTTGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGa < 7:795067/139‑1 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTG‑ATTTGGAAAACACTGGGCCATTGATTGAGAAACAGACGTAAATCCACCGCGCGCgggt > 7:293266/1‑138 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACAGAATAATCTGGCGTTCGCCACGAGCCGAGTTTTCTTTG‑GTGTGGAAAACAATAGGCCAATGTTTTTGTAACATGCGTAAATCCAgcgcgccccggt > 6:487145/1‑134 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCAGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTG‑ATATGGAAAACCCAGGGCCAATGTGTGTGAAACAGACATAAAAACAGCCCGCCCggca > 5:529369/1‑138 (MQ=255)
aaaCTTTTAGTAATGCATCGCCCTGATGATCAAATAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTG‑ATGTGGGAAACACAGGGCCATTGATTGTGAAACAGACGGTAATACAGCGCGCCCGGATTGAgg > 2:135773/1‑140 (MQ=255)
tttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGATCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCaa < 3:590772/140‑1 (MQ=255)
ttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTG‑ATTTGGTAAACACTTGGCCATTGATTGGGTAACAGGCGTAAATACAGCGCGCGCGGATTGTGGGTGAAt > 7:380633/1‑140 (MQ=255)
aTGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACCTAAATACAGCGCGCGCGGATTGAGGCTCCATCCggac > 8:446206/1‑138 (MQ=255)
tGCATCGCCCTGATGATCAAAGCACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑TAGTGGTAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATGAATCCGGCAt > 3:707421/1‑140 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAtt < 8:701374/123‑1 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGGGGAAAACACGGGCCCATTGTATTAGAAACAGACGGTAAACCAGCGCGCGCGGATTGAGGATCAATCCGGCAt > 3:536054/1‑140 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTG‑ATGTGGAAAAAACAGGCCCATTGATTGTGTAACCGACGGATATCCCGCGCGCGCGGGGTGCTGATGAATCCGGGAt > 2:633058/1‑140 (MQ=255)
cGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTG‑ATGTGGGAAACACAGGCCCCGTGATTGAGAAACAGACGTAAATACAGCGCGCGCGGATTGAGGATCACTCCGGCATGTCCg > 4:250710/1‑140 (MQ=255)
cGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCGTTG‑ATGTTGAAAACACAGGCCCCGTGGTTGTGAGACCGACGGAAATACAGCGCGCGCGGAGTGAGGGTCATTCCGGCATGTCCg > 6:89577/1‑140 (MQ=255)
ccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTc < 4:642386/140‑1 (MQ=255)
atgatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCCGATTGAGGATCAATCCGGCATGTCCGTTCaaaa > 4:774064/1‑139 (MQ=255)
atgatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTG‑TATTGGAAAAAACAGGCCCATTTGTTGAGAAACAGACGTAAATAAAGCGCCCGCGGCTTGAGGCTCGATACGGCAGTTGCGGTCAAAt > 2:21120/1‑140 (MQ=255)
atCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTG‑ATGTGGAAAACACTGGGCCATTGATTGAGAAACACACGTAAATACAGCGCGCCCGGATTGAGGATCAATCCGGCATGTCCGTTAAAATTCt > 4:163566/1‑140 (MQ=255)
atCAAAGAACAGAATACTCTGGCGTTCGCGACGAGCCGTGTTTTGTTTG‑AAGAGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCt < 6:743783/140‑1 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑TTGTGGAAAACACTGGCCCGATGATTGAGAAAAAGACGTAAATCAAGCGCGCGCGGATTTAGGATCAAAACGGCATGTCCGGTCAAAAGCTgg > 8:561990/1‑140 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTG‑ATGTGGAAAACACTGGCCCAATGATTTAGAAACAGCCCGAAATACAGCGCGCGCGGATTGAGGAGCCATCCGGCAAGTCCGGTGAAATGCTgg > 4:89848/1‑140 (MQ=255)
aGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGTGAAACAGACGTAAATACAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGGTCAAATGCTGGttt > 2:810419/1‑140 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGTTTTAGTTG‑ATGTTGTAAACACGGGCCCAGTGATTGAGAAAACGAAGTAAAAACAGCGCGCGCGGATTGAGGATCACTACCGCATGTGCGTGAAAATGCAGGTTTGTGAACg > 2:751982/1‑140 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTG‑ATGTGGAAAACACGGGCCCCTTGATTTAGAAACAGACGTAAAAACAGCGCGCGCGGATTGAGGATAAATAACGCATGTCCGTTCAAATGCTGGGTtgtgtaag > 7:31781/1‑136 (MQ=255)
ctctGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCAcc < 2:968545/140‑1 (MQ=255)
ctctGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCAcc < 1:669858/140‑1 (MQ=255)
tGGCGTTCGCCACGAGCCGTGGTTTCTTTG‑ATGTGGAAAACACAGGCCCATTGATTGTGAAACAGCAGTAAAAACACCCCCCCCGGAATGAGGATAAAGCCGCCATTTGCGTTCAAATTCTGGGTTGAGCACGCACCAAc > 2:546060/1‑140 (MQ=255)
gtcGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 5:39222/138‑1 (MQ=255)
ggaggtCGCCACGAGCCGTGTATTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 5:239077/135‑1 (MQ=255)
ggCGTTCGCCCCGCGCCGTGTTTTCTTTG‑ATGTGTAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATGGAGGCTCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 7:220595/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTTTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAGTGAGGATCAATCCGGCATGTCCGGTCAAATGCTGGTTTGTGAACGCACCAACt < 4:514924/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 1:906991/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 2:108384/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 7:246669/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:402579/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 1:805289/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCATTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 5:201344/140‑1 (MQ=255)
ggCGTGCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:694628/140‑1 (MQ=255)
cGTTCGCCACGAGCCGTGGTTTCGTTG‑ATGTGGAAAACACTGGCCCATTTATTGAGAAACCGACGTAAATCCCGAGCGCGCGGATTTAGGATCAATACGGCATGTCCGTTAAAATGGTGGGTTTTGAACGCACCAACttt > 6:700041/1‑139 (MQ=255)
ttCGCCACGAGCCGTGTTTTGTTTG‑ATGTGGAAAACACGGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAGTGAGGATACATACGGCATGTCCGTTCAAATTCTGGTTTGTGAACGCACCAACTTGtt > 4:868146/1‑140 (MQ=255)
tCGCCACGTGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGTCCCATTGATTGAGAAAGAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTc < 3:654852/140‑1 (MQ=255)
tCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTTGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTc < 1:537650/140‑1 (MQ=255)
gcGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGACCATTGATTGAGAAACAGACGTAATTCCAGGGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTc < 5:693203/139‑1 (MQ=255)
cGCCACGCGCCGTGTTTTGTTTG‑ATGTGGAAAACACGGGCCCATTGATTGAGGAACAGACGTAAATGCCGCGCGCGCGGCTTGAGGCTCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCCACTTGGTCa > 8:655829/1‑140 (MQ=255)
cGCCACGAGCCGTGTTTTGTTTG‑ATGTGGTAAACACTGGCCCATTGATTGAGAAACAGACGGAAATCCAGCGCGCGCGGATTGAGGGTCAATCCGGCATGTCCGGTCAAATGGTGGTTTGTGGACGCCCCCACTTGttga > 2:173060/1‑138 (MQ=255)
gCCACGAGCCGTGGTTTGTTTG‑ATGTGGTAAACACTGGCCCATTGATTGAGGAACAGCCGGAAATAACGCGCGCGCGGCGTGAGGATCCATCCGGCGAGTCCGTTCAAATGCTGGTTTGTGAACGGACCAACATGTTGAt > 2:592656/1‑140 (MQ=255)
aCGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 7:7110/140‑1 (MQ=255)
cGAGCCGTGGTTTCTTTG‑ATGTGGAAAACCCTGGCCCAGTTATTGAGAAACAGACGGAAATCCAGCGCGCGCGGATTGAGGCTCAATCCGGCATGGCCGTTCAAAAGCAGGTTTGTGCACGCCCCAACTTGGTCATGGAc > 8:345160/1‑140 (MQ=255)
gAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACt < 2:321113/140‑1 (MQ=255)
gAGCCGTGTTTTATTTG‑ATGTGGAAAACACTTGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACt < 1:11215/140‑1 (MQ=255)
gtgtTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAACTGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTa < 3:353433/140‑1 (MQ=255)
gtgtTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTa < 1:813764/140‑1 (MQ=255)
gtgtTTTCTTTG‑ATGTGGAAAACACTGGCCCAGTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTa < 4:662139/140‑1 (MQ=255)
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CGTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTG‑ATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394148‑2394423
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
