Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,394,287 |
T→G |
16.8% |
N115T (AAC→ACC) |
chuS ← |
hematinate‑forming heme oxygenase ChuS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,394,287 | 0 | T | G | 16.8%
| 460.1
/ 28.1
| 271 | N115T (AAC→ACC) | chuS | hematinate‑forming heme oxygenase ChuS |
| Reads supporting (aligned to +/- strand): ref base T (89/127); new base G (49/2); total (139/132) |
| Fisher's exact test for biased strand distribution p-value = 4.05e-14 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 274 total aligned reads displayed.
TTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394152‑2394423
|
ttCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTc > 8:1107223/1‑140 (MQ=255)
tctcATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCt < 8:884285/140‑1 (MQ=255)
cATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCtt < 3:1259265/138‑1 (MQ=255)
aTCGGTGATAATCAGTGGCAGAATCTGACTACATGCCGCCATATAGGTATTGTCGGTGGGATAATCTTTTTGGAATGGATAGCCCTGATGAGCAAAGAACTGAATACTCTGGGGTTCGCCACGAGCCGTGTtttgtttgt > 6:562609/1‑139 (MQ=255)
aTCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTTATGATCAAAGAACTGAATACTCTTGCGTTCGCCACGAGCCGTGTTTTCTTTgt > 2:158362/1‑139 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTgct > 6:914958/1‑138 (MQ=255)
ggTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAt > 4:722809/1‑138 (MQ=255)
taTAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGa < 2:726418/139‑1 (MQ=255)
gATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAtgtg < 3:355423/138‑1 (MQ=255)
aTAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGaa < 6:705230/140‑1 (MQ=255)
tAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTCTTTGATGTGGa > 4:64549/1‑138 (MQ=255)
aaCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGATTTGGgaa > 3:225646/1‑138 (MQ=255)
aaCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGGTTATTTGTTGTGGtaaaa > 5:691813/1‑139 (MQ=255)
tgacAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCACTGATGATCAAAGAACAGCATACTCTGGCTTTCGCCACGATCCGTGTTTTATTTGATGTGGTAAAAAATgg > 6:1044455/4‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGTACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTGGATGTGGTTAACACTgg > 1:329969/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGTCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTgg > 8:610708/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTgg > 1:1363386/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTGTTCTTTGTTGTTGAAAacacctg > 1:787859/1‑137 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGGAAAACACttg > 6:509483/1‑138 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAACACTgg > 2:1018054/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTAGCCACGAGCCGTGTTTTATTTGATGTGGAAAacacgtg > 1:1326863/1‑137 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTTAAGTGGAAAACACTgg > 4:388518/1‑138 (MQ=255)
aGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCa < 5:325135/140‑1 (MQ=255)
cACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCattgattg < 5:656634/140‑1 (MQ=255)
cTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTAGCCACGAGCCGTGGTTTAGTTGATGTGGAAAACACATGCCCaatgattt > 4:1271315/1‑137 (MQ=255)
tCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACAGGCCCATTGATTgaga > 2:448002/1‑140 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 7:51958/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 1:967079/140‑1 (MQ=255)
tGCCGCCATATCGGTAGTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 8:442664/140‑1 (MQ=255)
ccgccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGa < 8:352987/140‑1 (MQ=255)
gccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACg < 5:270004/140‑1 (MQ=255)
ccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATTATCAAATAAATGAATACTCTGGCGTTCTCCACGAGCCGTGATTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGt < 5:1157052/140‑1 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGGAAACACGGGCCCATTGAGTGAGAAAAAgcaggt > 8:391377/1‑135 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTGTTCTTTGTTGTTGTAAAACCTGGCCCATTGATTGAGAAACAGCCGtt > 2:962618/1‑139 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTTTTGTGGAATACAATGGGCCATTGCTTGAGTAAAAGACGTa > 7:169893/1‑140 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTAGCCACGAGCCGTGTTTTCTTTGATGTGGAGAAAACTGGCCCCTTTATTGATAAAAAGACGTa > 1:1143721/1‑140 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACCCGGGCCCAGTGATTGAGAATCAGACgga > 4:703816/1‑136 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 6:86745/140‑1 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGGGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 5:505810/140‑1 (MQ=255)
gcggcgtcATAAACTTTTATTAATTCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGAGACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCCTTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 7:81342/133‑1 (MQ=255)
gcGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGAGTGAGAAACAGACGTAAATCCAgcgcgcg < 6:1207699/139‑1 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTTATGTGGAAAACACTGGCCCATTGTATGATAAACAGACGTAAATACAgcccgcc > 4:1239639/1‑137 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGATGTGGAAAAAACTGGCCCATTTATTTTGAAACACACGTAAATCCAGcgcccgcg > 1:1046801/1‑140 (MQ=255)
tGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGa < 2:573565/140‑1 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACTGGCCCATTGATTGTGAAACAGACGTAAATCCAGCGCGCGCGGAt > 2:1069913/1‑140 (MQ=255)
gCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAtt < 7:443800/140‑1 (MQ=255)
cATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCATTGATGTGGAAAACAAAGGGCCATTGAATTAGAAACAGACCTAAAACCCGCGCGCGCGGag > 4:257708/1‑137 (MQ=255)
tAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAg < 8:103212/140‑1 (MQ=255)
aaCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAg < 3:741589/138‑1 (MQ=255)
aCTTTTAGTAAGGCATCGCCCTGATGATCAAAGAACTGTATACTCTGGCGTTCGCCACGTGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATACAGCGCGCGCGGATTGAgg < 3:791586/138‑1 (MQ=255)
ttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTTATTTGTTAAACACAAGCCCAATTATTTAGAAACAAACGAAAATCCAGCCCGCGCGGATTGAGGATGaaa > 5:879978/1‑139 (MQ=255)
aGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGGTTGATGTGGAAAACACTGGCACAATGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGCTCAAt > 4:1001249/1‑138 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGTATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCAt < 8:1152900/140‑1 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCAt < 2:666649/140‑1 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTAATTGATGGGGAAAACACTGGCCCATTGATTGATCAACAGGCGTAAATCCAGCGCGCGCGGCTGGAGGCTGACTCCGGCAt > 2:1253534/1‑140 (MQ=255)
gCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGCCGTAAATACAGCGCGCGCGGATTGAGGATCAATCCGGCCTg > 8:1263530/1‑140 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGTTGTGGTAAACAAAGGCCCCGTGATTGAGAAACAGACGTAAATACACCGCGCCCGGATTGAGGAGAAATCCGGcct > 3:1049179/1‑136 (MQ=255)
ccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGGAAAAAAAATGCCCATTGAAATTCAAACAGACCTAAAAGCACCGCCCCCCGAATGAGGCTCAATCCCGCATGTGCGt > 4:1171605/1‑138 (MQ=255)
atgatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTTGAAAACACTTGACCATTGATTGAGAAAAAGACGTAAATCCAGCGCGCGCGGATTGACGGAAAAACCGGCATGTCCGttgataa > 8:515918/1‑135 (MQ=255)
atgatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGGAAACACTGGGCCATTGATTGAGAAACCTACGTAAAAACCCCGCGCCCGGAGTGAGGATCAATACGGCAAGTACGTTCaaaa > 7:1160182/1‑139 (MQ=255)
gatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTTTTTGGGAAAAAACAGGCCCATTGAATGAGAAAAAGACGTAAATACACCGCGCGCGGAGTGAGGGTCAATCCGGCATGTGCGTTaaaaa > 3:526971/1‑137 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTATTTGATGTGGAAAAAACTGGCCCATTGATTGAGAAAAAAACGTAAATACAGCGCGCCCCGAGTGATGATCAATCCGGCCTGTCCCTTAAAAttcggg > 7:942367/1‑135 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCGTTGATGTGGGAAACACAGGGCCCTTGATTTAGAAAAAGAAGTAAATACAGCGCCCGCGGATGTATGATCAATCCGGCCTGTCCGTTCaaaagattg > 6:1308938/1‑134 (MQ=255)
aGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACGGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCCCCGATTTAGGATAACTCCGGCATGTCCGTTCAAATGCTGGt > 4:1035971/1‑138 (MQ=255)
aaCTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAAAACGGGCCCATTGATTGAGAAACAGACGTAAATACAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCAGGTTtgt > 8:766383/1‑140 (MQ=255)
ccagAATACTCAGGCGGTCGCCACGAGCCTTGATTTCTTTGATGAGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCGAGCGCGCGCGGATTGAGGATCAATCCTGCATGTACGTTCAAATGCTGGTTtg < 3:70876/135‑1 (MQ=255)
tGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGaa < 1:166395/140‑1 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGGAAACACTGGCCCATTGTTTGAGAAACAGACGTAAATCCAGCGCGCGCGGAGTGAGGATCCATCCGGCATGTCCGTTCAAATGCTGGGTTGTGAACg > 8:470018/1‑140 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGaa < 3:1175416/138‑1 (MQ=255)
tACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGGGGAAAACACTGGCCCATTGATTGGTAAACAGACGTAAATACAGCGCGCGCGGATTGAGGGGCAATCCGGCATGTCCGGTGAAATGCTGGTTTGTGaagg > 4:147647/1‑136 (MQ=255)
ctctGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGGAAACACTGGCCCAGTGATTGAGAAACAGACGTAAATACAGCGCGCGCGGATTGAGGATAAATCCGGCATTTACGTTCAAAAGAAGGTTTTTGAACGCa > 4:894229/1‑138 (MQ=255)
tctGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACTGGGCCCTTGATTGCGAAAACCCCGTAAATACAACGCGCGCGGGATGAGGAACAATCCGGCATGGCCGTTGAAATGCGGGTTTGTGAACGCAccc > 6:776293/1‑139 (MQ=255)
tctGGCGTTCGCCACGAGCCGTGTTTGATTTGAAGGGGCAAACAATGGCCCATTGCTTGAGAAAACGCCGGAAATCCAGCGCGCGCGGTGTGAGGCTCAATCCGGCATGGCCCGTCAAATGAGGGTTTGTGGACGCGccc > 8:70042/1‑139 (MQ=255)
tGGCGTTCGCCCCTCGCCGTGTTTTCTTTGATGAGGAAAACACTGTACCAATGAATGTGAAACCGAACGAAATCCAGCCCGCGCCGATTGAGGATATAAAAGGAATGTCAGTTACAATGCTGTGTTGTTAACgaaaccac > 2:776068/1‑133 (MQ=255)
tGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAAAGCTGGTTTGTGAACGCCCCAAc > 2:38129/1‑140 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 3:289925/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 4:1298167/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 4:225646/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 4:299001/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 3:62951/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 3:881782/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 8:15693/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 1:616514/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 8:943259/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 2:1333482/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 6:679013/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 5:1239268/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGGTTTGGTTGATGTGGAAAACACCGGCCCATTGATTGAGGAACACACGTAAATGCAGCGCGCGCGGATTGAGGGTCAATCCGGCATGTGCGGTGAAATGCTGGTTTTTGGACGCCCCAAcg > 2:1115928/1‑139 (MQ=255)
ggCGTTCGCCACGAGACGTGTTTTGTTTGATGTGTAAAACAATGGCCCATTGATTGAGAAACAGACTTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 4:961235/138‑1 (MQ=255)
ggCGTGCGCCACGAGCCGTGTTTTCTTTGATGTGGAACACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 3:159633/138‑1 (MQ=255)
gCGTTCGCCACGAGCCGTGTTTTATTTTATGTGGTAAACACTGGCCCATTTTTTGATAAACAGACGTAAATACAGCGAGCGCGGATTTAGGGTGAATACGGCAGGTCCGTTCAAATTCTGGTTTGTGTAAGCCCCAAc > 4:804923/1‑138 (MQ=255)
cGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGAGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCa < 6:158491/140‑1 (MQ=255)
cGCCACGAGCCGTGGTTTGTTTGTTGTGGAAAACACGGGCCCATTTGTTTAGAAACCGACGTAAATCCAGCGCGCGCGGATTGAGGCTCAATCCGGCATGTCCGGTCAACTGCGGGTTTGTGAACGCACCAACTTGTTCa > 6:329605/1‑140 (MQ=255)
cGCCACGAGCCGTGGTTTCTTTGTTGTGGGAAACACAGGCCCCTTGTGTGAGAAACCGACGTAAATACAGCGCGCGCGGATTGAGGCTAAATGCCGCATGTGCGTGCAAATGGTGGTTTGTGAACGCACCAACTTGtt > 4:929323/1‑138 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 7:358475/140‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 1:636416/140‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 1:470918/140‑1 (MQ=255)
gAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACt < 6:214357/140‑1 (MQ=255)
gAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGAGCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACt < 1:866132/140‑1 (MQ=255)
gtgtTTTCATTGATGTGGAAAACAATGCCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCTGATTGAGGATCAATCCGGAATGTCCGTTCAAATGCTGGTTTGTGAACGCAACAACTTGTTCATGGACTGAGTa < 6:349035/140‑1 (MQ=255)
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TTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394152‑2394423
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
